Click here to switch to the map view.

The map label for this gene is omp31 [H]

Identifier: 114798934

GI number: 114798934

Start: 1029563

End: 1030441

Strand: Direct

Name: omp31 [H]

Synonym: HNE_1020

Alternate gene names: 114798934

Gene position: 1029563-1030441 (Clockwise)

Preceding gene: 114798018

Following gene: 114800465

Centisome position: 27.79

GC content: 64.28

Gene sequence:

>879_bases
ATGAAGAAGTTTCTCCTTACTTCGGCCGTGCTTCTCAGCGCGGGCGCTCCGGCATTCGCCGACGATCTTTCGACAGCCGC
TGCGCCGGGCGCCTATAGCTGGACAGGCTTCTATGCCGGCGTGCATGCTGGCCCGACATGGCAGGATCGCAGCGCGGAGC
GCGGCCTTGTTACGGGCAGCGTTGCGCCTGATTTCGACTATGACGCCAATCTCAACGAAGGCGGCCCCAGCGGCGGCGTT
GCCGAGGGCAGCCCGCTTGCGGCGATCTTCCCGTCCGAGTTCGGCTCGTCCGAAAAAGTCGGCATGTCGGGCGGCGTTCA
GGCCGGTTACAACCAGCAGTATGGCCGGTTTGCCCTCGGCTTTGAGGCAGACTTTACCGGCCTCGGCAGCAATGGCGGCG
ATGATGGCGCCGTGCAGGGCCTTACCGCCTCCAACCCCGCATTCGGTGACGCCGTGTTCGGGACCGATCTGCGCGTTCGC
TCCAGCATGGACTATCTGGCCACAACCCGTCTGCGGGCGGGCGTCGTGACCGACCGTTTCCTGGTCTACGGCACCGGCGG
CGCAGCCGTCGGCAACCCTGAGCATCAGGTGGACTTTTCTGCCGGCCTCACGGCGACGGGCGGCACACTGGTTGGCCCGC
TTGATCGTTCAAACAGCTTCTCCGGCCGCAAGGACGACTGGAAGGGTGGCTGGACAGCCGGCGCAGGCGGCGAATTCGCC
TTCACCGACAACATGACGCTGAAAGCCGAGTATCTCTATTATGATCTGGGCGAAACACATGTCGGCGCCACCTCGACCAG
CGCGCCAGGCTTTGCGGCTGTGTACGGCTTTGAAAACAGAGGCCAGTCGGCCCGGATCGCCCTGAACCGCAAGTTCTGA

Upstream 100 bases:

>100_bases
AATAAATGCGCATTATTGCTGACAATTCTTTTTCATAAACCGCAACTGGCAATTAGATGGCATCTTTCAACAAAATTAAT
TCGTATCAGGAATATATTTT

Downstream 100 bases:

>100_bases
TCCGGTCTTCCGCAGCAATGAAAAGGGCGCCTTCGCGGGCGCCCTTTTTTATGCGGGTCTGTTGGGGCAGCCTCAGGCCA
GGCGGCGGTTGAGCATCTCG

Product: putative outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MKKFLLTSAVLLSAGAPAFADDLSTAAAPGAYSWTGFYAGVHAGPTWQDRSAERGLVTGSVAPDFDYDANLNEGGPSGGV
AEGSPLAAIFPSEFGSSEKVGMSGGVQAGYNQQYGRFALGFEADFTGLGSNGGDDGAVQGLTASNPAFGDAVFGTDLRVR
SSMDYLATTRLRAGVVTDRFLVYGTGGAAVGNPEHQVDFSAGLTATGGTLVGPLDRSNSFSGRKDDWKGGWTAGAGGEFA
FTDNMTLKAEYLYYDLGETHVGATSTSAPGFAAVYGFENRGQSARIALNRKF

Sequences:

>Translated_292_residues
MKKFLLTSAVLLSAGAPAFADDLSTAAAPGAYSWTGFYAGVHAGPTWQDRSAERGLVTGSVAPDFDYDANLNEGGPSGGV
AEGSPLAAIFPSEFGSSEKVGMSGGVQAGYNQQYGRFALGFEADFTGLGSNGGDDGAVQGLTASNPAFGDAVFGTDLRVR
SSMDYLATTRLRAGVVTDRFLVYGTGGAAVGNPEHQVDFSAGLTATGGTLVGPLDRSNSFSGRKDDWKGGWTAGAGGEFA
FTDNMTLKAEYLYYDLGETHVGATSTSAPGFAAVYGFENRGQSARIALNRKF
>Mature_292_residues
MKKFLLTSAVLLSAGAPAFADDLSTAAAPGAYSWTGFYAGVHAGPTWQDRSAERGLVTGSVAPDFDYDANLNEGGPSGGV
AEGSPLAAIFPSEFGSSEKVGMSGGVQAGYNQQYGRFALGFEADFTGLGSNGGDDGAVQGLTASNPAFGDAVFGTDLRVR
SSMDYLATTRLRAGVVTDRFLVYGTGGAAVGNPEHQVDFSAGLTATGGTLVGPLDRSNSFSGRKDDWKGGWTAGAGGEFA
FTDNMTLKAEYLYYDLGETHVGATSTSAPGFAAVYGFENRGQSARIALNRKF

Specific function: Major outer membrane protein associated with peptidoglycans. May function as a porin [H]

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the omp25/ropB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017690
- InterPro:   IPR011250
- InterPro:   IPR000498 [H]

Pfam domain/function: PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 30082; Mature: 30082

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFLLTSAVLLSAGAPAFADDLSTAAAPGAYSWTGFYAGVHAGPTWQDRSAERGLVTGS
CCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEECC
VAPDFDYDANLNEGGPSGGVAEGSPLAAIFPSEFGSSEKVGMSGGVQAGYNQQYGRFALG
CCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHCCCCCCCCCCCCCCCCCCCCCCEEEEE
FEADFTGLGSNGGDDGAVQGLTASNPAFGDAVFGTDLRVRSSMDYLATTRLRAGVVTDRF
ECCCCCCCCCCCCCCHHEECEECCCCCCCCEEECCCEEEECCCHHHHHHHHHHCEEECEE
LVYGTGGAAVGNPEHQVDFSAGLTATGGTLVGPLDRSNSFSGRKDDWKGGWTAGAGGEFA
EEEECCCCCCCCCCCEEEECCCCEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEE
FTDNMTLKAEYLYYDLGETHVGATSTSAPGFAAVYGFENRGQSARIALNRKF
EECCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECC
>Mature Secondary Structure
MKKFLLTSAVLLSAGAPAFADDLSTAAAPGAYSWTGFYAGVHAGPTWQDRSAERGLVTGS
CCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEECC
VAPDFDYDANLNEGGPSGGVAEGSPLAAIFPSEFGSSEKVGMSGGVQAGYNQQYGRFALG
CCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHCCCCCCCCCCCCCCCCCCCCCCEEEEE
FEADFTGLGSNGGDDGAVQGLTASNPAFGDAVFGTDLRVRSSMDYLATTRLRAGVVTDRF
ECCCCCCCCCCCCCCHHEECEECCCCCCCCEEECCCEEEECCCHHHHHHHHHHCEEECEE
LVYGTGGAAVGNPEHQVDFSAGLTATGGTLVGPLDRSNSFSGRKDDWKGGWTAGAGGEFA
EEEECCCCCCCCCCCEEEECCCCEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEE
FTDNMTLKAEYLYYDLGETHVGATSTSAPGFAAVYGFENRGQSARIALNRKF
EECCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8751924; 11756688 [H]