Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114798923

Identifier: 114798923

GI number: 114798923

Start: 1985893

End: 1986564

Strand: Direct

Name: 114798923

Synonym: HNE_1916

Alternate gene names: NA

Gene position: 1985893-1986564 (Clockwise)

Preceding gene: 114799887

Following gene: 114799181

Centisome position: 53.6

GC content: 61.46

Gene sequence:

>672_bases
ATGCTCACCCTTTCCCGGCGTTTCGCAGCAGTGGCGTTCTCCGCTCTGGCACTTGTTGCCTGTGGCGCGGCGGGCGACGG
TGCCGGCACATCTGGCGCCAACCCGTCCGAGGCAAATGCTGATGGCGAACTCGGCCATGTCCTGGGGCAAGCCGACGCCC
CGCTGACGATCATCGAATACGCCTCGCCCACCTGCCCCGCCTGTAAGTATTTCCACGACACGGTGAAACCCACGATCGAG
GAAAAATACATCTCCACCGGCAAGGTGAAGTTCGTCTTCCGCGAATATCCGCTCAACGAGATTGACGTGGCCGCTTACGC
GATGGCCCGCTGCGCCGGCGACGACAAGTTCTTCGACGTGCTGGATGATCTCTTCGAGAACCAGGAAGGCATCCGCTATG
CCGCCCAGAACGGCGTTGTGAAAACCACCCTCGGCGCCATTGGCCAGCGCCACGGCATCGCCGATACCGCCACCTTCGAG
GCCTGCCTCTCCAACAGCGAAATCCGCCAGGCTCTCGCAGACACCTACGCCACCTCCGAAAAGTGGGGCGTTGAAGGCAC
GCCAACCTTCATCATCGACGGCGTGAAGCACAACTTCCAGGGTGAATACACGACCGCTGAAGGCTTCTCGAAACAGATCG
ACGCGAAACTCGCCGAACTGGGCGCCCAGTAG

Upstream 100 bases:

>100_bases
GGCGAGGCTGTGCTATCCGCCACAGAGTAAACAGGATCGCCCGGTTTGTTAACCGTTTGGAAACCGGCGCGACTCATTCC
TTAACGCGAGGCTTATGATC

Downstream 100 bases:

>100_bases
CGATGAGGAACCGGCATGCAGATAACTGAACTCCGCATCGCCGGCTTCAAGTCGTTCGTTGACCCGCAAACCGTACCGAT
CGAGCCAGGGCTGACAGGCA

Product: DSBA-like thioredoxin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MLTLSRRFAAVAFSALALVACGAAGDGAGTSGANPSEANADGELGHVLGQADAPLTIIEYASPTCPACKYFHDTVKPTIE
EKYISTGKVKFVFREYPLNEIDVAAYAMARCAGDDKFFDVLDDLFENQEGIRYAAQNGVVKTTLGAIGQRHGIADTATFE
ACLSNSEIRQALADTYATSEKWGVEGTPTFIIDGVKHNFQGEYTTAEGFSKQIDAKLAELGAQ

Sequences:

>Translated_223_residues
MLTLSRRFAAVAFSALALVACGAAGDGAGTSGANPSEANADGELGHVLGQADAPLTIIEYASPTCPACKYFHDTVKPTIE
EKYISTGKVKFVFREYPLNEIDVAAYAMARCAGDDKFFDVLDDLFENQEGIRYAAQNGVVKTTLGAIGQRHGIADTATFE
ACLSNSEIRQALADTYATSEKWGVEGTPTFIIDGVKHNFQGEYTTAEGFSKQIDAKLAELGAQ
>Mature_223_residues
MLTLSRRFAAVAFSALALVACGAAGDGAGTSGANPSEANADGELGHVLGQADAPLTIIEYASPTCPACKYFHDTVKPTIE
EKYISTGKVKFVFREYPLNEIDVAAYAMARCAGDDKFFDVLDDLFENQEGIRYAAQNGVVKTTLGAIGQRHGIADTATFE
ACLSNSEIRQALADTYATSEKWGVEGTPTFIIDGVKHNFQGEYTTAEGFSKQIDAKLAELGAQ

Specific function: May be required for disulfide bond formation in some proteins [H]

COG id: COG1651

COG function: function code O; Protein-disulfide isomerase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR017937
- InterPro:   IPR012335 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23736; Mature: 23736

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTLSRRFAAVAFSALALVACGAAGDGAGTSGANPSEANADGELGHVLGQADAPLTIIEY
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEC
ASPTCPACKYFHDTVKPTIEEKYISTGKVKFVFREYPLNEIDVAAYAMARCAGDDKFFDV
CCCCCCHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHH
LDDLFENQEGIRYAAQNGVVKTTLGAIGQRHGIADTATFEACLSNSEIRQALADTYATSE
HHHHHCCCCCHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHCCC
KWGVEGTPTFIIDGVKHNFQGEYTTAEGFSKQIDAKLAELGAQ
CCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLTLSRRFAAVAFSALALVACGAAGDGAGTSGANPSEANADGELGHVLGQADAPLTIIEY
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEC
ASPTCPACKYFHDTVKPTIEEKYISTGKVKFVFREYPLNEIDVAAYAMARCAGDDKFFDV
CCCCCCHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHH
LDDLFENQEGIRYAAQNGVVKTTLGAIGQRHGIADTATFEACLSNSEIRQALADTYATSE
HHHHHCCCCCHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHCCC
KWGVEGTPTFIIDGVKHNFQGEYTTAEGFSKQIDAKLAELGAQ
CCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA