| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is parA [H]
Identifier: 114798917
GI number: 114798917
Start: 3696230
End: 3697036
Strand: Reverse
Name: parA [H]
Synonym: HNE_3561
Alternate gene names: 114798917
Gene position: 3697036-3696230 (Counterclockwise)
Preceding gene: 114798745
Following gene: 114799854
Centisome position: 99.78
GC content: 60.59
Gene sequence:
>807_bases ATGACTAGACCCAGAATATTTGCCGTGGTGAATCAAAAGGGCGGGGTCGGAAAGACCACGACCTCGATCAATCTCGGAAC AGCTCTTGCTGCCGTTGGCCGCCGCGTCCTGATCGTCGATTTCGACGCCCAGGGGAACGCTTCCACCGGCCTTGGCATTT CACGTGCCGAACGCCTGATGACCTCTTACGATCTGGTCGTCGATCGTGTGCCGCTTGAAGAGGCCGTTCTTTCCACCATC GTGCCGCGGCTCGACATTGTGCCGGGCGACGAGAACCTGTCCGGCGTGGAAACAGAGCTCGCGGGGGATGCCCACCGGTC TTACCGGCTCAAGGAATCGCTCCACTCCTATATCGACCGGGTCGAACAGGGCGGACTGGTTAAGTATGACTATGTCCTGA TCGATTGCCCGCCGTCGCTTTCGGCGCTGACGATGAATGCGATGACGGCGGCCGATGCGCTTCTGGTTCCGCTTCAATGC GAGTTCCTGGCCCTCGAAGGTCTGACCCAGCTTCTGCGCACTGTCGAAGTTGTCCGCTCCGGCCTCAACCCGACCCTCGA AATCCAGGGCGTGGTGCTCACCATGTACGACCGGCGCAACAGCCTGTCGGATCAGGTGGCCAATGAGGTCCGGGCCTTCT TCGGCACTAAGGTCTACAACACCGTGATCCCGCGCAACGTCCGCCTTTCGGAGGCACCATCCTTCGGCAAGCCGGCGCTG CTCTATGATTATCGTTGCCCAGGCAGCGAGGCTTACATTCGCCTCGCGTCCGAAGTGTTGCAGCGTGAAAGGGCGAGGGC GGCATGA
Upstream 100 bases:
>100_bases ACTGCGGCTAGGCAAAGATGGAATTTCGCTTATGAAGCGATTCCAAGTCGCAGTGGTGGGTCAGGCGTCATCTTGATTAT CAGGGAGGTCGCACGTCGTA
Downstream 100 bases:
>100_bases GTGATCCGGCAGAGGACAATCGCGGGCGTCCGAGCCGGCTTGGCCGGGGTCTGTCTGCACTGATCGGCGAGGTCGAGGCG ATGAATGTTCGCCCGGCGGC
Product: chromosome partitioning protein ParA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MTRPRIFAVVNQKGGVGKTTTSINLGTALAAVGRRVLIVDFDAQGNASTGLGISRAERLMTSYDLVVDRVPLEEAVLSTI VPRLDIVPGDENLSGVETELAGDAHRSYRLKESLHSYIDRVEQGGLVKYDYVLIDCPPSLSALTMNAMTAADALLVPLQC EFLALEGLTQLLRTVEVVRSGLNPTLEIQGVVLTMYDRRNSLSDQVANEVRAFFGTKVYNTVIPRNVRLSEAPSFGKPAL LYDYRCPGSEAYIRLASEVLQRERARAA
Sequences:
>Translated_268_residues MTRPRIFAVVNQKGGVGKTTTSINLGTALAAVGRRVLIVDFDAQGNASTGLGISRAERLMTSYDLVVDRVPLEEAVLSTI VPRLDIVPGDENLSGVETELAGDAHRSYRLKESLHSYIDRVEQGGLVKYDYVLIDCPPSLSALTMNAMTAADALLVPLQC EFLALEGLTQLLRTVEVVRSGLNPTLEIQGVVLTMYDRRNSLSDQVANEVRAFFGTKVYNTVIPRNVRLSEAPSFGKPAL LYDYRCPGSEAYIRLASEVLQRERARAA >Mature_267_residues TRPRIFAVVNQKGGVGKTTTSINLGTALAAVGRRVLIVDFDAQGNASTGLGISRAERLMTSYDLVVDRVPLEEAVLSTIV PRLDIVPGDENLSGVETELAGDAHRSYRLKESLHSYIDRVEQGGLVKYDYVLIDCPPSLSALTMNAMTAADALLVPLQCE FLALEGLTQLLRTVEVVRSGLNPTLEIQGVVLTMYDRRNSLSDQVANEVRAFFGTKVYNTVIPRNVRLSEAPSFGKPALL YDYRCPGSEAYIRLASEVLQRERARAA
Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication [H]
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the parA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 29287; Mature: 29156
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPRIFAVVNQKGGVGKTTTSINLGTALAAVGRRVLIVDFDAQGNASTGLGISRAERLM CCCCEEEEEEECCCCCCCCEEEEEHHHHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHH TSYDLVVDRVPLEEAVLSTIVPRLDIVPGDENLSGVETELAGDAHRSYRLKESLHSYIDR HHHHHHHCCCCHHHHHHHHHHCCCEECCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHH VEQGGLVKYDYVLIDCPPSLSALTMNAMTAADALLVPLQCEFLALEGLTQLLRTVEVVRS HHCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHH GLNPTLEIQGVVLTMYDRRNSLSDQVANEVRAFFGTKVYNTVIPRNVRLSEAPSFGKPAL CCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCEE LYDYRCPGSEAYIRLASEVLQRERARAA EEEECCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TRPRIFAVVNQKGGVGKTTTSINLGTALAAVGRRVLIVDFDAQGNASTGLGISRAERLM CCCEEEEEEECCCCCCCCEEEEEHHHHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHH TSYDLVVDRVPLEEAVLSTIVPRLDIVPGDENLSGVETELAGDAHRSYRLKESLHSYIDR HHHHHHHCCCCHHHHHHHHHHCCCEECCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHH VEQGGLVKYDYVLIDCPPSLSALTMNAMTAADALLVPLQCEFLALEGLTQLLRTVEVVRS HHCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHH GLNPTLEIQGVVLTMYDRRNSLSDQVANEVRAFFGTKVYNTVIPRNVRLSEAPSFGKPAL CCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCEE LYDYRCPGSEAYIRLASEVLQRERARAA EEEECCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9054507 [H]