Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114798880

Identifier: 114798880

GI number: 114798880

Start: 906615

End: 906968

Strand: Direct

Name: 114798880

Synonym: HNE_0887

Alternate gene names: NA

Gene position: 906615-906968 (Clockwise)

Preceding gene: 114797085

Following gene: 114799958

Centisome position: 24.47

GC content: 62.99

Gene sequence:

>354_bases
ATGTCCATCATCCGTTATCTTCCAGCAGCGGCGGGCCTTGTGCTCGCCGCCTGCGCATCGGGCACAACCTCGCCCACAAT
GCGCTGGAGCGCTTCGGCCTGGAATGGCCTTGCCGCCCAGACCATCGGCACAGACAATTACAGCTTCTTCGCCGCGCCGC
TCGATGGTGAAGGCTTCAAGCTCAAGCTGACCCTTGCCACCGATGGCGCTTTCCGTATCCAGGAGGGCGAGGACACCTTT
CCGGAAGAATTGCAGGCTGCCGCCGAGCAGGCCGCGCCTGAAGGCTGCCGTCTCGACACGCTCACGCTCGCCGCAGATGG
CAGCGCCGAAGCGGCCTATGATTGCCAAACTTAA

Upstream 100 bases:

>100_bases
CCGCTCCGCGATGGACGAGCCCCCGAAGGTCGCCTTCTAAGCCGCTCGCGCAGCCAGCCGGGCTGCGCTATCCTGGCAGG
GTCGCCAAGGGAGGTGCCCC

Downstream 100 bases:

>100_bases
ATGTTAGCGGGCATGGACACCGGCGCGCAGGATAGATCAGAATGCGGAAGGTCTGTTAGAGGGTGAGGCCCATCATGCGC
TATCTGGTCATTGCCGCGTC

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MSIIRYLPAAAGLVLAACASGTTSPTMRWSASAWNGLAAQTIGTDNYSFFAAPLDGEGFKLKLTLATDGAFRIQEGEDTF
PEELQAAAEQAAPEGCRLDTLTLAADGSAEAAYDCQT

Sequences:

>Translated_117_residues
MSIIRYLPAAAGLVLAACASGTTSPTMRWSASAWNGLAAQTIGTDNYSFFAAPLDGEGFKLKLTLATDGAFRIQEGEDTF
PEELQAAAEQAAPEGCRLDTLTLAADGSAEAAYDCQT
>Mature_116_residues
SIIRYLPAAAGLVLAACASGTTSPTMRWSASAWNGLAAQTIGTDNYSFFAAPLDGEGFKLKLTLATDGAFRIQEGEDTFP
EELQAAAEQAAPEGCRLDTLTLAADGSAEAAYDCQT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12170; Mature: 12038

Theoretical pI: Translated: 3.87; Mature: 3.87

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIIRYLPAAAGLVLAACASGTTSPTMRWSASAWNGLAAQTIGTDNYSFFAAPLDGEGFK
CCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEECCCCCEEEEECCCCCCEE
LKLTLATDGAFRIQEGEDTFPEELQAAAEQAAPEGCRLDTLTLAADGSAEAAYDCQT
EEEEEECCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEECCC
>Mature Secondary Structure 
SIIRYLPAAAGLVLAACASGTTSPTMRWSASAWNGLAAQTIGTDNYSFFAAPLDGEGFK
CHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEECCCCCEEEEECCCCCCEE
LKLTLATDGAFRIQEGEDTFPEELQAAAEQAAPEGCRLDTLTLAADGSAEAAYDCQT
EEEEEECCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA