| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is flgK [H]
Identifier: 114798876
GI number: 114798876
Start: 238653
End: 240104
Strand: Reverse
Name: flgK [H]
Synonym: HNE_0249
Alternate gene names: 114798876
Gene position: 240104-238653 (Counterclockwise)
Preceding gene: 114799551
Following gene: 114798459
Centisome position: 6.48
GC content: 62.4
Gene sequence:
>1452_bases GTGAGCATCTCAGCCGCCATCCTCGCAGCACGGTCCGGCCTTCAGGTTACCAGCCAGAAGGCCGAGATCGTCGCGACCAA CGTCGCCAACGCCAGCACGCCGGGCTATGTCCGGCGCTCGCTGGTGGTGGGCGAGCTCGTCAACGGGTCCCAGACGGCCG GTGTTATGGCGAACGGTGTCGCCCGCGCCGGGGACGATGCCATCAAGGCTCAGCGCCGTGAGCTGACCAGCGATGTCGCG CAGGCAACCGTACTCGCCTCAACCTGGCAGACAATCTCCCAACGCGTGGGCAACACCTCATCCGGCGGTGGGTTGTTCCG CAGTTTCTCGAACTTCGAAACCGCCCTCTCCGCAGCGGTCACCTCTCCGGAATCGACCGCAAACGGATCAGCGCTGCTTG ATGCAGCAAAGTCTGTGGCGCGGGAACTCAACAGCTTGTCTGAATACGGCGCGCAGGCCCGCGCCGAAGCCGATAGCGAA ATTGCGCAAGGGGTTGAAACGGTCAATACGGCCCTGAAACAGGTTCAGGACCTCAACAAGCGTATCGCCAGCATCGACCG CACGTCGGAGCAAGCCGCAACCCTGATGGACGAGCGCCAACGGGTTCTCGATACCATCGCCGAGTTTCTCCCGATCCAGA CCGTGCAACGCGATGCCGGAACGATTGATGTGCTCACCACGCAAGGGGTTTACCTGATCAATGGCAGCACCGCGCGCCAG ATCGAATTTACCCCCTCCTCCGCCTTCACGTCCGGCCAGACACTGGCCAACGGCGACCTGTCGGGCATTTCGGTTGACGG CATCGACCTGACAACCGGCTCAACCTCGTTCGGCGCGGTCTCCGGCGGATTGTTCGGCGCCCTGTTCACGCTGCGTGATC AGGACGTGCCCGCGTTCATGGACCAGTTGGACATGGTTGCGAACGACATCATCACCCGCCTCTCCGATGACGCCATAGAC CCGACCAAAACCCCCGGTGAGCAAGGCCTGTTCGTAGACCCAGACGCCGCAGGCCTGTCCGGGCTTGCCTCGCGCATTTC CGTTAACGCCGCCGTTGATCCGGCGCAGGGCGGCGACATCTGGCGCCTTCGCGACGGTCTCGGCGCAACCGCCTCCGGCC CGCCCGGCAACTCGGCGACGCTCTCGGCAATCTATGACGCTTTCACTCAGGTGAAATCCCTCAACGCAAACGGAATCCAG GGCGCCTTTTCCGCCAGTGATCTTGCCGCGCAGCTTTCCTCTGTTGTCGGACAGAAGCGCGTCTACCAGGACTCCGTGCT CGCCTCCACGCAGGCTCAGCACGTTACACTTGTTGAAGCCGAACAATCTCTGACCGGCGTTGATGTCGATGTGGAAATGG AATCTCTTCTGCTCATTGAGCAGGCCTATGCCGCCAATGCGCGGGTGATCCAGGTTGCCCGCGACATGATCGGCATCCTG ATGGAGCTCTGA
Upstream 100 bases:
>100_bases CGTATTCCTCGAACGCCAAGATCGTGCAGACGGTCGACGAGATGCTCCAGGAAACCACGAACCTGAAACGCTGACGGCGA TGACGGGGAGACCTGCCTAA
Downstream 100 bases:
>100_bases TACTCATGCGCATCATCCCCCCCAACAGCATCGTTTCGGCCTCCTTCAGCCAGAATATTGCCGACATGCGCGCGCGCGCA ACGATCGTCTCTCAGGAGTC
Product: flagellar hook-associated protein FlgK
Products: NA
Alternate protein names: HAP1 [H]
Number of amino acids: Translated: 483; Mature: 482
Protein sequence:
>483_residues MSISAAILAARSGLQVTSQKAEIVATNVANASTPGYVRRSLVVGELVNGSQTAGVMANGVARAGDDAIKAQRRELTSDVA QATVLASTWQTISQRVGNTSSGGGLFRSFSNFETALSAAVTSPESTANGSALLDAAKSVARELNSLSEYGAQARAEADSE IAQGVETVNTALKQVQDLNKRIASIDRTSEQAATLMDERQRVLDTIAEFLPIQTVQRDAGTIDVLTTQGVYLINGSTARQ IEFTPSSAFTSGQTLANGDLSGISVDGIDLTTGSTSFGAVSGGLFGALFTLRDQDVPAFMDQLDMVANDIITRLSDDAID PTKTPGEQGLFVDPDAAGLSGLASRISVNAAVDPAQGGDIWRLRDGLGATASGPPGNSATLSAIYDAFTQVKSLNANGIQ GAFSASDLAAQLSSVVGQKRVYQDSVLASTQAQHVTLVEAEQSLTGVDVDVEMESLLLIEQAYAANARVIQVARDMIGIL MEL
Sequences:
>Translated_483_residues MSISAAILAARSGLQVTSQKAEIVATNVANASTPGYVRRSLVVGELVNGSQTAGVMANGVARAGDDAIKAQRRELTSDVA QATVLASTWQTISQRVGNTSSGGGLFRSFSNFETALSAAVTSPESTANGSALLDAAKSVARELNSLSEYGAQARAEADSE IAQGVETVNTALKQVQDLNKRIASIDRTSEQAATLMDERQRVLDTIAEFLPIQTVQRDAGTIDVLTTQGVYLINGSTARQ IEFTPSSAFTSGQTLANGDLSGISVDGIDLTTGSTSFGAVSGGLFGALFTLRDQDVPAFMDQLDMVANDIITRLSDDAID PTKTPGEQGLFVDPDAAGLSGLASRISVNAAVDPAQGGDIWRLRDGLGATASGPPGNSATLSAIYDAFTQVKSLNANGIQ GAFSASDLAAQLSSVVGQKRVYQDSVLASTQAQHVTLVEAEQSLTGVDVDVEMESLLLIEQAYAANARVIQVARDMIGIL MEL >Mature_482_residues SISAAILAARSGLQVTSQKAEIVATNVANASTPGYVRRSLVVGELVNGSQTAGVMANGVARAGDDAIKAQRRELTSDVAQ ATVLASTWQTISQRVGNTSSGGGLFRSFSNFETALSAAVTSPESTANGSALLDAAKSVARELNSLSEYGAQARAEADSEI AQGVETVNTALKQVQDLNKRIASIDRTSEQAATLMDERQRVLDTIAEFLPIQTVQRDAGTIDVLTTQGVYLINGSTARQI EFTPSSAFTSGQTLANGDLSGISVDGIDLTTGSTSFGAVSGGLFGALFTLRDQDVPAFMDQLDMVANDIITRLSDDAIDP TKTPGEQGLFVDPDAAGLSGLASRISVNAAVDPAQGGDIWRLRDGLGATASGPPGNSATLSAIYDAFTQVKSLNANGIQG AFSASDLAAQLSSVVGQKRVYQDSVLASTQAQHVTLVEAEQSLTGVDVDVEMESLLLIEQAYAANARVIQVARDMIGILM EL
Specific function: Unknown
COG id: COG1256
COG function: function code N; Flagellar hook-associated protein
Gene ontology:
Cell location: Secreted. Bacterial flagellum (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787323, Length=565, Percent_Identity=23.716814159292, Blast_Score=90, Evalue=4e-19,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR001444 - InterPro: IPR002371 [H]
Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 50143; Mature: 50012
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSISAAILAARSGLQVTSQKAEIVATNVANASTPGYVRRSLVVGELVNGSQTAGVMANGV CCCHHHHHHHCCCCEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCH ARAGDDAIKAQRRELTSDVAQATVLASTWQTISQRVGNTSSGGGLFRSFSNFETALSAAV HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH TSPESTANGSALLDAAKSVARELNSLSEYGAQARAEADSEIAQGVETVNTALKQVQDLNK CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIASIDRTSEQAATLMDERQRVLDTIAEFLPIQTVQRDAGTIDVLTTQGVYLINGSTARQ HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEECCCCEE IEFTPSSAFTSGQTLANGDLSGISVDGIDLTTGSTSFGAVSGGLFGALFTLRDQDVPAFM EEECCCCCCCCCCCCCCCCCCCEEECCEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHH DQLDMVANDIITRLSDDAIDPTKTPGEQGLFVDPDAAGLSGLASRISVNAAVDPAQGGDI HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHEECCCCCCCCCCCE WRLRDGLGATASGPPGNSATLSAIYDAFTQVKSLNANGIQGAFSASDLAAQLSSVVGQKR EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH VYQDSVLASTQAQHVTLVEAEQSLTGVDVDVEMESLLLIEQAYAANARVIQVARDMIGIL HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH MEL HCC >Mature Secondary Structure SISAAILAARSGLQVTSQKAEIVATNVANASTPGYVRRSLVVGELVNGSQTAGVMANGV CCHHHHHHHCCCCEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCH ARAGDDAIKAQRRELTSDVAQATVLASTWQTISQRVGNTSSGGGLFRSFSNFETALSAAV HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH TSPESTANGSALLDAAKSVARELNSLSEYGAQARAEADSEIAQGVETVNTALKQVQDLNK CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIASIDRTSEQAATLMDERQRVLDTIAEFLPIQTVQRDAGTIDVLTTQGVYLINGSTARQ HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEECCCCEE IEFTPSSAFTSGQTLANGDLSGISVDGIDLTTGSTSFGAVSGGLFGALFTLRDQDVPAFM EEECCCCCCCCCCCCCCCCCCCEEECCEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHH DQLDMVANDIITRLSDDAIDPTKTPGEQGLFVDPDAAGLSGLASRISVNAAVDPAQGGDI HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHEECCCCCCCCCCCE WRLRDGLGATASGPPGNSATLSAIYDAFTQVKSLNANGIQGAFSASDLAAQLSSVVGQKR EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH VYQDSVLASTQAQHVTLVEAEQSLTGVDVDVEMESLLLIEQAYAANARVIQVARDMIGIL HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH MEL HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 8158647 [H]