Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114798867

Identifier: 114798867

GI number: 114798867

Start: 2779173

End: 2779892

Strand: Direct

Name: 114798867

Synonym: HNE_2621

Alternate gene names: NA

Gene position: 2779173-2779892 (Clockwise)

Preceding gene: 114798935

Following gene: 114798340

Centisome position: 75.01

GC content: 63.89

Gene sequence:

>720_bases
ATGGCCGAGATCATCATTCCGGGCCCCCAGGGCCGAATTGAAGCGCGCTATACGGAGCCGCCATATCCCGGCGCGCCGAT
CGCGCTGATCCTGCACCCCCACCCCAAAGCGGGCGGAACGATGCAGGACCCGATCACGATCATGCTCTACCAGCTGTTCG
AAAAGCACGGCTTTGGCGTGCTGCGCTACAATTCCCGCGGCGTGGGCCGCAGCCAGGGCGCGTATGACCAGGGCATCGGG
GAACTGGAAGACGCCGCCTATGTGCTCGACTATCTGGAGAACCTGTCGGAGTCGCCGCGTTTTGTCTGGTGCGCGGGCTA
TTCGTTCGGCGCCTGGATCACGCTGCAGCTGCTGATGCGCCGCCCGGAGATCGATGGCTTCCTCGCCATCTCGCCGCCGG
CCAACCATTATGACCTCTCCTTCCTGGCGCCGTGCCCGGCCTCGGGCCTGATCGTGGCAGGCGACAAGGATTCCATCGCT
TCGCCCGAAGACGTGGAGCGCGCGCTGACCAAGGTGCGCGTGCAGAAGGGCCAGAAGGTCGACCGCGCCAAGGTGGCCGG
GGCCAACCACTTCTACCAGGACAGCCGCGAAGAACTGATCGCCGTCTGCGAAGCCTATCTGCTGCGCCGCCTCGAAGAAG
CCGAAAACGAACTGCGCAAGGAAGCCGATGAGGAAGCCGGCGTAGATGTGATCGTCGAGGAAGAAGACTTCGAGGATTGA

Upstream 100 bases:

>100_bases
GAGCCTTTCGATCAATCCCGCACCCTGCAGAAAAATTTGCATTTGAGGACCGACTTGGCCTATCTACGCGCCCTTCTGTG
GAAAAAAGCCGAGGTTACCG

Downstream 100 bases:

>100_bases
TCCCAGACCCAGCGGCCCGCCCCAACCGGCGGGCCGTTTTTCTTTGCCGACAGGAACCTACCCCATGGCCAGCATCCGGT
TTGCGGGGACGGCGGATACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MAEIIIPGPQGRIEARYTEPPYPGAPIALILHPHPKAGGTMQDPITIMLYQLFEKHGFGVLRYNSRGVGRSQGAYDQGIG
ELEDAAYVLDYLENLSESPRFVWCAGYSFGAWITLQLLMRRPEIDGFLAISPPANHYDLSFLAPCPASGLIVAGDKDSIA
SPEDVERALTKVRVQKGQKVDRAKVAGANHFYQDSREELIAVCEAYLLRRLEEAENELRKEADEEAGVDVIVEEEDFED

Sequences:

>Translated_239_residues
MAEIIIPGPQGRIEARYTEPPYPGAPIALILHPHPKAGGTMQDPITIMLYQLFEKHGFGVLRYNSRGVGRSQGAYDQGIG
ELEDAAYVLDYLENLSESPRFVWCAGYSFGAWITLQLLMRRPEIDGFLAISPPANHYDLSFLAPCPASGLIVAGDKDSIA
SPEDVERALTKVRVQKGQKVDRAKVAGANHFYQDSREELIAVCEAYLLRRLEEAENELRKEADEEAGVDVIVEEEDFED
>Mature_238_residues
AEIIIPGPQGRIEARYTEPPYPGAPIALILHPHPKAGGTMQDPITIMLYQLFEKHGFGVLRYNSRGVGRSQGAYDQGIGE
LEDAAYVLDYLENLSESPRFVWCAGYSFGAWITLQLLMRRPEIDGFLAISPPANHYDLSFLAPCPASGLIVAGDKDSIAS
PEDVERALTKVRVQKGQKVDRAKVAGANHFYQDSREELIAVCEAYLLRRLEEAENELRKEADEEAGVDVIVEEEDFED

Specific function: Unknown

COG id: COG2945

COG function: function code R; Predicted hydrolase of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000383 [H]

Pfam domain/function: PF02129 Peptidase_S15 [H]

EC number: NA

Molecular weight: Translated: 26552; Mature: 26421

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEIIIPGPQGRIEARYTEPPYPGAPIALILHPHPKAGGTMQDPITIMLYQLFEKHGFGV
CCCEEECCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCEE
LRYNSRGVGRSQGAYDQGIGELEDAAYVLDYLENLSESPRFVWCAGYSFGAWITLQLLMR
EEECCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHH
RPEIDGFLAISPPANHYDLSFLAPCPASGLIVAGDKDSIASPEDVERALTKVRVQKGQKV
CCCCCCEEEECCCCCCCCEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCC
DRAKVAGANHFYQDSREELIAVCEAYLLRRLEEAENELRKEADEEAGVDVIVEEEDFED
CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC
>Mature Secondary Structure 
AEIIIPGPQGRIEARYTEPPYPGAPIALILHPHPKAGGTMQDPITIMLYQLFEKHGFGV
CCEEECCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCEE
LRYNSRGVGRSQGAYDQGIGELEDAAYVLDYLENLSESPRFVWCAGYSFGAWITLQLLMR
EEECCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHH
RPEIDGFLAISPPANHYDLSFLAPCPASGLIVAGDKDSIASPEDVERALTKVRVQKGQKV
CCCCCCEEEECCCCCCCCEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCC
DRAKVAGANHFYQDSREELIAVCEAYLLRRLEEAENELRKEADEEAGVDVIVEEEDFED
CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]