| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798867
Identifier: 114798867
GI number: 114798867
Start: 2779173
End: 2779892
Strand: Direct
Name: 114798867
Synonym: HNE_2621
Alternate gene names: NA
Gene position: 2779173-2779892 (Clockwise)
Preceding gene: 114798935
Following gene: 114798340
Centisome position: 75.01
GC content: 63.89
Gene sequence:
>720_bases ATGGCCGAGATCATCATTCCGGGCCCCCAGGGCCGAATTGAAGCGCGCTATACGGAGCCGCCATATCCCGGCGCGCCGAT CGCGCTGATCCTGCACCCCCACCCCAAAGCGGGCGGAACGATGCAGGACCCGATCACGATCATGCTCTACCAGCTGTTCG AAAAGCACGGCTTTGGCGTGCTGCGCTACAATTCCCGCGGCGTGGGCCGCAGCCAGGGCGCGTATGACCAGGGCATCGGG GAACTGGAAGACGCCGCCTATGTGCTCGACTATCTGGAGAACCTGTCGGAGTCGCCGCGTTTTGTCTGGTGCGCGGGCTA TTCGTTCGGCGCCTGGATCACGCTGCAGCTGCTGATGCGCCGCCCGGAGATCGATGGCTTCCTCGCCATCTCGCCGCCGG CCAACCATTATGACCTCTCCTTCCTGGCGCCGTGCCCGGCCTCGGGCCTGATCGTGGCAGGCGACAAGGATTCCATCGCT TCGCCCGAAGACGTGGAGCGCGCGCTGACCAAGGTGCGCGTGCAGAAGGGCCAGAAGGTCGACCGCGCCAAGGTGGCCGG GGCCAACCACTTCTACCAGGACAGCCGCGAAGAACTGATCGCCGTCTGCGAAGCCTATCTGCTGCGCCGCCTCGAAGAAG CCGAAAACGAACTGCGCAAGGAAGCCGATGAGGAAGCCGGCGTAGATGTGATCGTCGAGGAAGAAGACTTCGAGGATTGA
Upstream 100 bases:
>100_bases GAGCCTTTCGATCAATCCCGCACCCTGCAGAAAAATTTGCATTTGAGGACCGACTTGGCCTATCTACGCGCCCTTCTGTG GAAAAAAGCCGAGGTTACCG
Downstream 100 bases:
>100_bases TCCCAGACCCAGCGGCCCGCCCCAACCGGCGGGCCGTTTTTCTTTGCCGACAGGAACCTACCCCATGGCCAGCATCCGGT TTGCGGGGACGGCGGATACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MAEIIIPGPQGRIEARYTEPPYPGAPIALILHPHPKAGGTMQDPITIMLYQLFEKHGFGVLRYNSRGVGRSQGAYDQGIG ELEDAAYVLDYLENLSESPRFVWCAGYSFGAWITLQLLMRRPEIDGFLAISPPANHYDLSFLAPCPASGLIVAGDKDSIA SPEDVERALTKVRVQKGQKVDRAKVAGANHFYQDSREELIAVCEAYLLRRLEEAENELRKEADEEAGVDVIVEEEDFED
Sequences:
>Translated_239_residues MAEIIIPGPQGRIEARYTEPPYPGAPIALILHPHPKAGGTMQDPITIMLYQLFEKHGFGVLRYNSRGVGRSQGAYDQGIG ELEDAAYVLDYLENLSESPRFVWCAGYSFGAWITLQLLMRRPEIDGFLAISPPANHYDLSFLAPCPASGLIVAGDKDSIA SPEDVERALTKVRVQKGQKVDRAKVAGANHFYQDSREELIAVCEAYLLRRLEEAENELRKEADEEAGVDVIVEEEDFED >Mature_238_residues AEIIIPGPQGRIEARYTEPPYPGAPIALILHPHPKAGGTMQDPITIMLYQLFEKHGFGVLRYNSRGVGRSQGAYDQGIGE LEDAAYVLDYLENLSESPRFVWCAGYSFGAWITLQLLMRRPEIDGFLAISPPANHYDLSFLAPCPASGLIVAGDKDSIAS PEDVERALTKVRVQKGQKVDRAKVAGANHFYQDSREELIAVCEAYLLRRLEEAENELRKEADEEAGVDVIVEEEDFED
Specific function: Unknown
COG id: COG2945
COG function: function code R; Predicted hydrolase of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000383 [H]
Pfam domain/function: PF02129 Peptidase_S15 [H]
EC number: NA
Molecular weight: Translated: 26552; Mature: 26421
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEIIIPGPQGRIEARYTEPPYPGAPIALILHPHPKAGGTMQDPITIMLYQLFEKHGFGV CCCEEECCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCEE LRYNSRGVGRSQGAYDQGIGELEDAAYVLDYLENLSESPRFVWCAGYSFGAWITLQLLMR EEECCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHH RPEIDGFLAISPPANHYDLSFLAPCPASGLIVAGDKDSIASPEDVERALTKVRVQKGQKV CCCCCCEEEECCCCCCCCEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCC DRAKVAGANHFYQDSREELIAVCEAYLLRRLEEAENELRKEADEEAGVDVIVEEEDFED CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC >Mature Secondary Structure AEIIIPGPQGRIEARYTEPPYPGAPIALILHPHPKAGGTMQDPITIMLYQLFEKHGFGV CCEEECCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCEE LRYNSRGVGRSQGAYDQGIGELEDAAYVLDYLENLSESPRFVWCAGYSFGAWITLQLLMR EEECCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHH RPEIDGFLAISPPANHYDLSFLAPCPASGLIVAGDKDSIASPEDVERALTKVRVQKGQKV CCCCCCEEEECCCCCCCCEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCC DRAKVAGANHFYQDSREELIAVCEAYLLRRLEEAENELRKEADEEAGVDVIVEEEDFED CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]