| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798865
Identifier: 114798865
GI number: 114798865
Start: 1842067
End: 1843383
Strand: Reverse
Name: 114798865
Synonym: HNE_1797
Alternate gene names: NA
Gene position: 1843383-1842067 (Counterclockwise)
Preceding gene: 114797406
Following gene: 114799149
Centisome position: 49.75
GC content: 55.58
Gene sequence:
>1317_bases ATGAAAAAAATTGCGATCATTGGCGCAGGCATCTCCGGATTGGGCGCCGCGTGGGCACTTAAGGACACAGCGGATGTCAC CCTGTTCGAGCAGGATAAGCGCGCGGGTGGCCACGCCAACACGCACGTATTCGACTATGACGGGCACCCTACTGCGGTGG ATCTTGGCTTCATCGTCTATAACGCGCGGAATTATCCCAATCTTATTGCCTTCTTTGACGAGCTGGGCGTTGAAACGCAG GCTTCTGATATGAGCTTCGCCGTTTCAGACCCTTCAGGTTGGGAGTGGGCTTCTACTCTGCCCGGCCTGTTTGCCCAGAA ACGCAATCTTCTGAACCCGGACTTTCATCGTTTCTGGCGGACGATCCTCAAGTTCAACAACACGGCGCGCGCAGAACTTT CGGCCGGCCTGGTGACTGAAACATCGCTAGGCGCGTGGCTGGATCGCCACTGCTATGATGAAGCGTTCCGGAAAAATTAC ATCCTCCCTATGGGCGCCGCGATCTGGTCGACACCCGAGCGTGAGATGCTCAACTATCCCGCACAAAGCTTCTTTCAGTT CTTCGACAATCACCGCCTCATGCACAAGGAACGCCCCAAATGGCGTACCGTCACCGGTGGAAGCCAGAGTTATGTGAAAA AGGCTGCAGACGGACTAGATGGACGCCTCAGATCTGGCGTGCGTGTTGAGAGAATAAGCCCGTTTGGCAGCCGGACCTCT GTCCATCTCGATAATGGGCACACAGAGATATTTGACGAAGTAATCCTTGCCGCGCATTCAAACCAGGCGCTGGCGCTGGT TCAGGACCGGTACGAAGACCAGGCATTTCTGCTGCGCTCTGTCCGGTATCGCCCTAACAGTATCTGGCTGCACCGCGACC CGGCCCTGATGCCAAAGCGAAAAAGCGCATGGGCGAGCTGGAACGTTCTGAAGCAGGAAGGCGACGATATTTGTCTCACC TATTGGATGAACAGGTTGCAAGGGATAGATTCCTCACGCCCGCTTTTCATCACGCTGAATCCGGCGACACCGCCGAAAGA AGAATACACGTTTCTCCACTACACGCTTGACCATCCACAGTTCGACACGGCCGCAGAAGCGGCTGTGCGGGGCCTGAACC GCATCCAGGGCAAGGATAATCTTTGGTTTGCCGGGGCATGGATGGGCCGAGGCTTCCATGAGGATGGCCTGAAGTCTGGC CTCTTCGCGGGGTTGTCACTAGGTGGGAAAGTCTCTTGGGACGTGCAGGGAGTTGAAACGCAGTCTCCAAAAAAGGACCC TGTTGTGGTATCTATGTCAGCAGAGGTATCTGCTTGA
Upstream 100 bases:
>100_bases TGCTGGGCACGGACTATCCCGAACCGATAATCGACCACCCTGTAGGCCGGCAGCGCGCACTGGATGCCTATAAGGCCATG AAAGAGGAACAGACCGCCGA
Downstream 100 bases:
>100_bases TCACGCCCGCCCTCCGTCTCTGGACTGGCAAGACGGTCCATCACCGCTTTTCCCCTTTCGAGCGGCGGTTCGCCTATAAC ATTTTCCTGATCGATCTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase; Amine Oxidase Flavin-Containing; Dehydrogenase; Amine Oxidoreductase; Flavin Containing Amine Oxidoreductase; Flavin-Containing Amine Oxidase; Amino-Oxidase; Oxidoreductase; Amine Oxidase Flavin-Containing Superfamily; FAD-Dependent Oxidoreductase; Amino Oxidase; Flavin Containing Amine Oxidoreductase Protein; Amine Oxidase Flavin-Containing Protein; Amine Oxidase Protein; Amine OxidaseFAD Dependent Oxidoreductase; Amine-Oxidase; Fad Dependent Oxidoreductase; Flavin Containing Amine Oxidoreductas; Lipoprotein
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MKKIAIIGAGISGLGAAWALKDTADVTLFEQDKRAGGHANTHVFDYDGHPTAVDLGFIVYNARNYPNLIAFFDELGVETQ ASDMSFAVSDPSGWEWASTLPGLFAQKRNLLNPDFHRFWRTILKFNNTARAELSAGLVTETSLGAWLDRHCYDEAFRKNY ILPMGAAIWSTPEREMLNYPAQSFFQFFDNHRLMHKERPKWRTVTGGSQSYVKKAADGLDGRLRSGVRVERISPFGSRTS VHLDNGHTEIFDEVILAAHSNQALALVQDRYEDQAFLLRSVRYRPNSIWLHRDPALMPKRKSAWASWNVLKQEGDDICLT YWMNRLQGIDSSRPLFITLNPATPPKEEYTFLHYTLDHPQFDTAAEAAVRGLNRIQGKDNLWFAGAWMGRGFHEDGLKSG LFAGLSLGGKVSWDVQGVETQSPKKDPVVVSMSAEVSA
Sequences:
>Translated_438_residues MKKIAIIGAGISGLGAAWALKDTADVTLFEQDKRAGGHANTHVFDYDGHPTAVDLGFIVYNARNYPNLIAFFDELGVETQ ASDMSFAVSDPSGWEWASTLPGLFAQKRNLLNPDFHRFWRTILKFNNTARAELSAGLVTETSLGAWLDRHCYDEAFRKNY ILPMGAAIWSTPEREMLNYPAQSFFQFFDNHRLMHKERPKWRTVTGGSQSYVKKAADGLDGRLRSGVRVERISPFGSRTS VHLDNGHTEIFDEVILAAHSNQALALVQDRYEDQAFLLRSVRYRPNSIWLHRDPALMPKRKSAWASWNVLKQEGDDICLT YWMNRLQGIDSSRPLFITLNPATPPKEEYTFLHYTLDHPQFDTAAEAAVRGLNRIQGKDNLWFAGAWMGRGFHEDGLKSG LFAGLSLGGKVSWDVQGVETQSPKKDPVVVSMSAEVSA >Mature_438_residues MKKIAIIGAGISGLGAAWALKDTADVTLFEQDKRAGGHANTHVFDYDGHPTAVDLGFIVYNARNYPNLIAFFDELGVETQ ASDMSFAVSDPSGWEWASTLPGLFAQKRNLLNPDFHRFWRTILKFNNTARAELSAGLVTETSLGAWLDRHCYDEAFRKNY ILPMGAAIWSTPEREMLNYPAQSFFQFFDNHRLMHKERPKWRTVTGGSQSYVKKAADGLDGRLRSGVRVERISPFGSRTS VHLDNGHTEIFDEVILAAHSNQALALVQDRYEDQAFLLRSVRYRPNSIWLHRDPALMPKRKSAWASWNVLKQEGDDICLT YWMNRLQGIDSSRPLFITLNPATPPKEEYTFLHYTLDHPQFDTAAEAAVRGLNRIQGKDNLWFAGAWMGRGFHEDGLKSG LFAGLSLGGKVSWDVQGVETQSPKKDPVVVSMSAEVSA
Specific function: Unknown
COG id: COG2907
COG function: function code R; Predicted NAD/FAD-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49216; Mature: 49216
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIAIIGAGISGLGAAWALKDTADVTLFEQDKRAGGHANTHVFDYDGHPTAVDLGFIVY CCEEEEEECCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCEEEECCCCCCEEEEEEEEE NARNYPNLIAFFDELGVETQASDMSFAVSDPSGWEWASTLPGLFAQKRNLLNPDFHRFWR ECCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH TILKFNNTARAELSAGLVTETSLGAWLDRHCYDEAFRKNYILPMGAAIWSTPEREMLNYP HHHHCCCCCHHHHHCCEEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHCCC AQSFFQFFDNHRLMHKERPKWRTVTGGSQSYVKKAADGLDGRLRSGVRVERISPFGSRTS HHHHHHHHHCCCCHHCCCCCEEEECCCCHHHHHHHHCCCCHHHHCCEEEEEECCCCCCEE VHLDNGHTEIFDEVILAAHSNQALALVQDRYEDQAFLLRSVRYRPNSIWLHRDPALMPKR EEECCCCHHHHHHHHHHHCCCCEEEEEHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCCC KSAWASWNVLKQEGDDICLTYWMNRLQGIDSSRPLFITLNPATPPKEEYTFLHYTLDHPQ CCCCHHHHHHHHCCCCEEHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCC FDTAAEAAVRGLNRIQGKDNLWFAGAWMGRGFHEDGLKSGLFAGLSLGGKVSWDVQGVET CCHHHHHHHHHHHHHCCCCCEEEEEEHHCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCC QSPKKDPVVVSMSAEVSA CCCCCCCEEEEECCCCCC >Mature Secondary Structure MKKIAIIGAGISGLGAAWALKDTADVTLFEQDKRAGGHANTHVFDYDGHPTAVDLGFIVY CCEEEEEECCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCEEEECCCCCCEEEEEEEEE NARNYPNLIAFFDELGVETQASDMSFAVSDPSGWEWASTLPGLFAQKRNLLNPDFHRFWR ECCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH TILKFNNTARAELSAGLVTETSLGAWLDRHCYDEAFRKNYILPMGAAIWSTPEREMLNYP HHHHCCCCCHHHHHCCEEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHCCC AQSFFQFFDNHRLMHKERPKWRTVTGGSQSYVKKAADGLDGRLRSGVRVERISPFGSRTS HHHHHHHHHCCCCHHCCCCCEEEECCCCHHHHHHHHCCCCHHHHCCEEEEEECCCCCCEE VHLDNGHTEIFDEVILAAHSNQALALVQDRYEDQAFLLRSVRYRPNSIWLHRDPALMPKR EEECCCCHHHHHHHHHHHCCCCEEEEEHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCCC KSAWASWNVLKQEGDDICLTYWMNRLQGIDSSRPLFITLNPATPPKEEYTFLHYTLDHPQ CCCCHHHHHHHHCCCCEEHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCC FDTAAEAAVRGLNRIQGKDNLWFAGAWMGRGFHEDGLKSGLFAGLSLGGKVSWDVQGVET CCHHHHHHHHHHHHHCCCCCEEEEEEHHCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCC QSPKKDPVVVSMSAEVSA CCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA