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The map label for this gene is rpmJ

Identifier: 114798781

GI number: 114798781

Start: 3500252

End: 3500377

Strand: Direct

Name: rpmJ

Synonym: HNE_3350

Alternate gene names: 114798781

Gene position: 3500252-3500377 (Clockwise)

Preceding gene: 114798953

Following gene: 114797582

Centisome position: 94.47

GC content: 53.17

Gene sequence:

>126_bases
ATGAAAGTCCGCTCGTCTCTCAAATCGCTCAAGTCACGTCACCGCGACTGTAAGATCGTGCGCCGCAAAGGCCGGGTCTA
TGTGATCAACAAAACCGACCCGCGTTTCAAAGCGAAACAAGGCTGA

Upstream 100 bases:

>100_bases
CTTTCAGCAGCCTTCTCGCCGCAGTTACCGTTCTTGACTCGGCTATCCGGATTCATTACGCGCTCCGCTTTCCCAATTCC
TAAATGTCCAGGCCAGACCC

Downstream 100 bases:

>100_bases
CCCTTAGATGAACAGGGATTGAGGCGGCAGAATGACGGCCCGCATCGCCCTGTTTGATTTAGGTGGCGTCCTCCTCGACT
GGTCGCCGGCACGCCTTTAC

Product: 50S ribosomal protein L36

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 41; Mature: 41

Protein sequence:

>41_residues
MKVRSSLKSLKSRHRDCKIVRRKGRVYVINKTDPRFKAKQG

Sequences:

>Translated_41_residues
MKVRSSLKSLKSRHRDCKIVRRKGRVYVINKTDPRFKAKQG
>Mature_41_residues
MKVRSSLKSLKSRHRDCKIVRRKGRVYVINKTDPRFKAKQG

Specific function: Unknown

COG id: COG0257

COG function: function code J; Ribosomal protein L36

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L36P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL36_HYPNA (Q0BWX0)

Other databases:

- EMBL:   CP000158
- RefSeq:   YP_762023.1
- ProteinModelPortal:   Q0BWX0
- SMR:   Q0BWX0
- STRING:   Q0BWX0
- GeneID:   4287763
- GenomeReviews:   CP000158_GR
- KEGG:   hne:HNE_3350
- NMPDR:   fig|228405.5.peg.3206
- TIGR:   HNE_3350
- eggNOG:   NOG129164
- HOGENOM:   HBG734088
- ProtClustDB:   PRK00831
- BioCyc:   HNEP81032:HNE_3350-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00251
- InterPro:   IPR000473
- PANTHER:   PTHR18804
- TIGRFAMs:   TIGR01022

Pfam domain/function: PF00444 Ribosomal_L36; SSF57840 Ribosomal_L36

EC number: NA

Molecular weight: Translated: 4872; Mature: 4872

Theoretical pI: Translated: 12.19; Mature: 12.19

Prosite motif: PS00828 RIBOSOMAL_L36

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVRSSLKSLKSRHRDCKIVRRKGRVYVINKTDPRFKAKQG
CCHHHHHHHHHHHCHHHHHHHCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MKVRSSLKSLKSRHRDCKIVRRKGRVYVINKTDPRFKAKQG
CCHHHHHHHHHHHCHHHHHHHCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA