| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798751
Identifier: 114798751
GI number: 114798751
Start: 2878667
End: 2879836
Strand: Direct
Name: 114798751
Synonym: HNE_2716
Alternate gene names: NA
Gene position: 2878667-2879836 (Clockwise)
Preceding gene: 114797992
Following gene: 114799308
Centisome position: 77.7
GC content: 66.41
Gene sequence:
>1170_bases ATGTGCCCTGCATTCTGGAGGACATTGCTCATGGCCAACCTTCCTGTTCCGGTTCCGGCCTCAACGCCTGCCGTCAAACC TGCCCAGAGGTGGGAGCTGGCGGCGCAGTGGGCGCAGGGGTGGCGGATTTTGAAATGGTCGGTGAGCGCGGTGGTGGTGA TCGCGGCGCTGATGGTGATTGGGCAGGGATACCTGTTTTACCGGCTGTTTGATGATGTCCATCCGCTGCTGGGCTATGCG TATATCCTGCTGCTGACGGCGGGGCTGGCGCTGCTGGTTGTGCGGCCGGTGATGGCGTTTCTGTCGATGCCCGTGGCGGC CAAACCGCCGGATATTCTGATTGATCCCAAAGCCCCTGATCCCAAGGCGCTGGTGGCGCGGGTGCGCTATGACATCCGCT ATCTGCAGATGCTGGCGGCAAACCCCGAAGTGCAGGCCGAGCGCGCCGCCATTGAGGAGAGCATCGCCAAGGGCCGGGCT CTGATGGCGCGCGCGGGACGGGCGACGCCGCAGGAGGCGCTGGGGATTTCCTCCGAGCTGGAGACATTTGAGCGCGCGCA TATCGAGGCGCTGCTCGGCCCGCTGGACCGCCGCGTGAACCAGATCATCCATGCCGAGGCCGTCGGCGTGGGCGTCGCCA CAGCGCTTTCGATGAATGGCACGGTGGACGCGTTCATTGTGCTGTGGCGCAATGCCAATCTCATCGCCCGCATCTCGCGC ATCTATTTCGGGCGGCCGCATCTGATGGGCAGCCTGCGCATTCTGCGCGATGTGGCGGCCATCGTGGTCGCCGCCCGCGC GCTGGAGGATGTGACCGATCTGACCGGCGATGTGGTGGGCAGCCTGCTCGGCCGGATGGGCGGGCTGATTGCCGGGCCGG TGATGGATGGCGGCATCAATGCGATGATGACGCTGAAGCTCGGCTATCTCGCCAAGCGCCGCTGCCGCAGCTTCAAGGGC TGGACGGCGGGCCAGGCGGCGGCGATTTCCGAGGGCGCGTTGCGCGAAGTGAAGGCCGAATCGGGCTCGGTCATCACGGA TCTTCTCAAACGCGTCGGCGGGCTCACCACCCACGCCACCCGCGCCACCGAGCGCGTGCTCGCCGGATCGCGCAGCACCT GGGAGCTGATCCGCAGCTGGTTTGGCGGCGGGCGGCCGGTGGGCAGCTGA
Upstream 100 bases:
>100_bases CGGATAGAGCGAAGCGAAATCCGCCATCCCGGAACACCGCGCTCGTGGTTGTCGGATTTCGGCCTTTGGCCTCTATCCGA CCTACGGGGGGTGGCGCTTA
Downstream 100 bases:
>100_bases CGCCATCGTGATCACTGCGTCAGCGGCGCGGATGGACAGCCCTGCCCGGCTCAGTTCAGATGGGGATGGGTGGGACCAAG GCTGACCGGGTGGGTGCACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MCPAFWRTLLMANLPVPVPASTPAVKPAQRWELAAQWAQGWRILKWSVSAVVVIAALMVIGQGYLFYRLFDDVHPLLGYA YILLLTAGLALLVVRPVMAFLSMPVAAKPPDILIDPKAPDPKALVARVRYDIRYLQMLAANPEVQAERAAIEESIAKGRA LMARAGRATPQEALGISSELETFERAHIEALLGPLDRRVNQIIHAEAVGVGVATALSMNGTVDAFIVLWRNANLIARISR IYFGRPHLMGSLRILRDVAAIVVAARALEDVTDLTGDVVGSLLGRMGGLIAGPVMDGGINAMMTLKLGYLAKRRCRSFKG WTAGQAAAISEGALREVKAESGSVITDLLKRVGGLTTHATRATERVLAGSRSTWELIRSWFGGGRPVGS
Sequences:
>Translated_389_residues MCPAFWRTLLMANLPVPVPASTPAVKPAQRWELAAQWAQGWRILKWSVSAVVVIAALMVIGQGYLFYRLFDDVHPLLGYA YILLLTAGLALLVVRPVMAFLSMPVAAKPPDILIDPKAPDPKALVARVRYDIRYLQMLAANPEVQAERAAIEESIAKGRA LMARAGRATPQEALGISSELETFERAHIEALLGPLDRRVNQIIHAEAVGVGVATALSMNGTVDAFIVLWRNANLIARISR IYFGRPHLMGSLRILRDVAAIVVAARALEDVTDLTGDVVGSLLGRMGGLIAGPVMDGGINAMMTLKLGYLAKRRCRSFKG WTAGQAAAISEGALREVKAESGSVITDLLKRVGGLTTHATRATERVLAGSRSTWELIRSWFGGGRPVGS >Mature_389_residues MCPAFWRTLLMANLPVPVPASTPAVKPAQRWELAAQWAQGWRILKWSVSAVVVIAALMVIGQGYLFYRLFDDVHPLLGYA YILLLTAGLALLVVRPVMAFLSMPVAAKPPDILIDPKAPDPKALVARVRYDIRYLQMLAANPEVQAERAAIEESIAKGRA LMARAGRATPQEALGISSELETFERAHIEALLGPLDRRVNQIIHAEAVGVGVATALSMNGTVDAFIVLWRNANLIARISR IYFGRPHLMGSLRILRDVAAIVVAARALEDVTDLTGDVVGSLLGRMGGLIAGPVMDGGINAMMTLKLGYLAKRRCRSFKG WTAGQAAAISEGALREVKAESGSVITDLLKRVGGLTTHATRATERVLAGSRSTWELIRSWFGGGRPVGS
Specific function: Unknown
COG id: COG3768
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0283 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021147 - InterPro: IPR006507 [H]
Pfam domain/function: PF05128 DUF697 [H]
EC number: NA
Molecular weight: Translated: 41956; Mature: 41956
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCPAFWRTLLMANLPVPVPASTPAVKPAQRWELAAQWAQGWRILKWSVSAVVVIAALMVI CCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHH GQGYLFYRLFDDVHPLLGYAYILLLTAGLALLVVRPVMAFLSMPVAAKPPDILIDPKAPD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCC PKALVARVRYDIRYLQMLAANPEVQAERAAIEESIAKGRALMARAGRATPQEALGISSEL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHH ETFERAHIEALLGPLDRRVNQIIHAEAVGVGVATALSMNGTVDAFIVLWRNANLIARISR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHH IYFGRPHLMGSLRILRDVAAIVVAARALEDVTDLTGDVVGSLLGRMGGLIAGPVMDGGIN HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCH AMMTLKLGYLAKRRCRSFKGWTAGQAAAISEGALREVKAESGSVITDLLKRVGGLTTHAT HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHH RATERVLAGSRSTWELIRSWFGGGRPVGS HHHHHHHHCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MCPAFWRTLLMANLPVPVPASTPAVKPAQRWELAAQWAQGWRILKWSVSAVVVIAALMVI CCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHH GQGYLFYRLFDDVHPLLGYAYILLLTAGLALLVVRPVMAFLSMPVAAKPPDILIDPKAPD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCC PKALVARVRYDIRYLQMLAANPEVQAERAAIEESIAKGRALMARAGRATPQEALGISSEL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHH ETFERAHIEALLGPLDRRVNQIIHAEAVGVGVATALSMNGTVDAFIVLWRNANLIARISR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHH IYFGRPHLMGSLRILRDVAAIVVAARALEDVTDLTGDVVGSLLGRMGGLIAGPVMDGGIN HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCH AMMTLKLGYLAKRRCRSFKGWTAGQAAAISEGALREVKAESGSVITDLLKRVGGLTTHAT HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHH RATERVLAGSRSTWELIRSWFGGGRPVGS HHHHHHHHCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA