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The map label for this gene is yrbE [C]

Identifier: 114798707

GI number: 114798707

Start: 3078794

End: 3079921

Strand: Reverse

Name: yrbE [C]

Synonym: HNE_2921

Alternate gene names: 114798707

Gene position: 3079921-3078794 (Counterclockwise)

Preceding gene: 114799834

Following gene: 114799973

Centisome position: 83.13

GC content: 61.7

Gene sequence:

>1128_bases
ATGCTGAACCTTACCGCCCCCAGCTTCGCGCTTGAAGACAGCGACGAGGGAAACGTCCTCCGCCTTGGCGGAGACTGGAC
GGTGGCGACCATTAACCAGCTCGATGCCCAATTGCGCGCGGTGTCTCAATCTGTCCCGATTTGTCTTGATGTGTCCGGAC
TTGGCCGCCTTGATACCTCGGGCGCGTATCTGATCGACCGCACCTGGCGCGAAAATGGCGCCGCCTGGCCGCCCCGGATT
GTGGGCGACCACGCCTCCGCCGCCAGCCTTCTGGAACAGGTCCACGCCCATGCTGAGCCCGTCCCGCCACCCGCAAAAGC
CGATGCGGGCCTCCTCGCCATGCTCGAGCGGACCGGCAAGGGAAGCGTTGATTTCTATAAAGAAACCACCGCCAGCCTCG
CCTTCCTGGGGGAGACGCTGGTCACCATTGTCCGCCTTCTGGTGCAGCCCTGGAAGCTGCGCTGGACCTCCATCGTGGCG
GTCATGGAAGAAGCCGGGCTCAATGCGATGCCGATCATCGCTTTCCTCTCCTTCTTCGTCGGCATGGTCGTCGCCTTCAT
TGGTGCAACGACGCTGAAAGACTTCGACCTTGAGATCTACACGATTGAACTCATTGGCTTTTCCATGCTGCGCGAGTTTG
GCGTCGTGCTCACGGGCATTGTCCTGGCCGGCCGTACAAACTCCTCCTTCACCGCCCAGATCGGGACCATGAAGATGCGC
CAGGAGGTCGATGCCATGCAGACCCTCGGCCTCAAGCCGATGGACGTTCTGGTCGCCCCACGGGTTCTCGCCATGCTGGT
GATGACGCCGATCCTTACCTTCGTTGCCACCCTCGCCGGCGTTGCCGGCGGCGCCACCGTTGCCTGGGCAGCCCTCGACA
TCAACCCGGCTGTCTTCGTGGAGCGGATGCGCAATTCCGTTCCCATCGACCAGTTCTGGATCGGCATGTCCAAATCCCCC
GTTTTCGGGCTGGTTGTGGCGCTGATTGCCTGCCGCCAGGGGCTTCAGGTCGGTGGCAGTGTCCAGTCACTTGGCAAGGC
AACCACCACATCCGTGGTGCAGGCGATCTTCGCCATCATCGTCATCGATGCCATCTTCGCGATCTTCTATATGGAGTTGG
GCCTGTGA

Upstream 100 bases:

>100_bases
AGATGACCCATGGGTTAATCCTGCAAAGTGAATTGTATTGGATTGGCACACACCGTCCTTAAGCATGTTTTGGTAGTCAG
GTCAGTCAGGACCCTAAAGA

Downstream 100 bases:

>100_bases
GCGAGGCGCCCATCATCCGCATCCGCGACATGAAAGTCGCCTATGGCCGTAATGTCATCCTCGACGGGTTCAGCCTCGAT
ATTCCGCGCGGCGAAGTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MLNLTAPSFALEDSDEGNVLRLGGDWTVATINQLDAQLRAVSQSVPICLDVSGLGRLDTSGAYLIDRTWRENGAAWPPRI
VGDHASAASLLEQVHAHAEPVPPPAKADAGLLAMLERTGKGSVDFYKETTASLAFLGETLVTIVRLLVQPWKLRWTSIVA
VMEEAGLNAMPIIAFLSFFVGMVVAFIGATTLKDFDLEIYTIELIGFSMLREFGVVLTGIVLAGRTNSSFTAQIGTMKMR
QEVDAMQTLGLKPMDVLVAPRVLAMLVMTPILTFVATLAGVAGGATVAWAALDINPAVFVERMRNSVPIDQFWIGMSKSP
VFGLVVALIACRQGLQVGGSVQSLGKATTTSVVQAIFAIIVIDAIFAIFYMELGL

Sequences:

>Translated_375_residues
MLNLTAPSFALEDSDEGNVLRLGGDWTVATINQLDAQLRAVSQSVPICLDVSGLGRLDTSGAYLIDRTWRENGAAWPPRI
VGDHASAASLLEQVHAHAEPVPPPAKADAGLLAMLERTGKGSVDFYKETTASLAFLGETLVTIVRLLVQPWKLRWTSIVA
VMEEAGLNAMPIIAFLSFFVGMVVAFIGATTLKDFDLEIYTIELIGFSMLREFGVVLTGIVLAGRTNSSFTAQIGTMKMR
QEVDAMQTLGLKPMDVLVAPRVLAMLVMTPILTFVATLAGVAGGATVAWAALDINPAVFVERMRNSVPIDQFWIGMSKSP
VFGLVVALIACRQGLQVGGSVQSLGKATTTSVVQAIFAIIVIDAIFAIFYMELGL
>Mature_375_residues
MLNLTAPSFALEDSDEGNVLRLGGDWTVATINQLDAQLRAVSQSVPICLDVSGLGRLDTSGAYLIDRTWRENGAAWPPRI
VGDHASAASLLEQVHAHAEPVPPPAKADAGLLAMLERTGKGSVDFYKETTASLAFLGETLVTIVRLLVQPWKLRWTSIVA
VMEEAGLNAMPIIAFLSFFVGMVVAFIGATTLKDFDLEIYTIELIGFSMLREFGVVLTGIVLAGRTNSSFTAQIGTMKMR
QEVDAMQTLGLKPMDVLVAPRVLAMLVMTPILTFVATLAGVAGGATVAWAALDINPAVFVERMRNSVPIDQFWIGMSKSP
VFGLVVALIACRQGLQVGGSVQSLGKATTTSVVQAIFAIIVIDAIFAIFYMELGL

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=210, Percent_Identity=28.0952380952381, Blast_Score=90, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 40116; Mature: 40116

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNLTAPSFALEDSDEGNVLRLGGDWTVATINQLDAQLRAVSQSVPICLDVSGLGRLDTS
CCCCCCCCCCCCCCCCCCEEEECCCEEEEHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
GAYLIDRTWRENGAAWPPRIVGDHASAASLLEQVHAHAEPVPPPAKADAGLLAMLERTGK
CCEEEECCHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCC
GSVDFYKETTASLAFLGETLVTIVRLLVQPWKLRWTSIVAVMEEAGLNAMPIIAFLSFFV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
GMVVAFIGATTLKDFDLEIYTIELIGFSMLREFGVVLTGIVLAGRTNSSFTAQIGTMKMR
HHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHH
QEVDAMQTLGLKPMDVLVAPRVLAMLVMTPILTFVATLAGVAGGATVAWAALDINPAVFV
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHH
ERMRNSVPIDQFWIGMSKSPVFGLVVALIACRQGLQVGGSVQSLGKATTTSVVQAIFAII
HHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
VIDAIFAIFYMELGL
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MLNLTAPSFALEDSDEGNVLRLGGDWTVATINQLDAQLRAVSQSVPICLDVSGLGRLDTS
CCCCCCCCCCCCCCCCCCEEEECCCEEEEHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
GAYLIDRTWRENGAAWPPRIVGDHASAASLLEQVHAHAEPVPPPAKADAGLLAMLERTGK
CCEEEECCHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCC
GSVDFYKETTASLAFLGETLVTIVRLLVQPWKLRWTSIVAVMEEAGLNAMPIIAFLSFFV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
GMVVAFIGATTLKDFDLEIYTIELIGFSMLREFGVVLTGIVLAGRTNSSFTAQIGTMKMR
HHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHH
QEVDAMQTLGLKPMDVLVAPRVLAMLVMTPILTFVATLAGVAGGATVAWAALDINPAVFV
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHH
ERMRNSVPIDQFWIGMSKSPVFGLVVALIACRQGLQVGGSVQSLGKATTTSVVQAIFAII
HHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
VIDAIFAIFYMELGL
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]