| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798679
Identifier: 114798679
GI number: 114798679
Start: 1581388
End: 1582584
Strand: Direct
Name: 114798679
Synonym: HNE_1556
Alternate gene names: NA
Gene position: 1581388-1582584 (Clockwise)
Preceding gene: 114797863
Following gene: 114797605
Centisome position: 42.68
GC content: 61.15
Gene sequence:
>1197_bases ATGGCGACCAGTGCTGAACAAATTCGTGCCTATAGGGGGCCGGCTCTGTTCAGCCTTGGCCTGCGGCCCTTCTTTCTGTT GGGCGCGATCTGGGCAGCAATCGCCATACCCCTCTGGATTGCGACCTATGCGTTTGGCCCGGTGGCCCTGTCGGTAGAGG CGGGCCTTGCATTTCATGTGCATGAAATGGTCTTCGGTTACGGATCTGCGATCGTGGCAGGGTTTTTGCTGACTGCGGTT CCGAACTGGACGGGCCGGCTGCCTGTCTGCGGACAACCTCTCATGATATTGGTGGCGATCTGGATTGCGGGGCGTATCGC CATGCTGGTCCAGCCGGACCCTGCCTGGTTGGCGGGGGCCATCGAGAGCGCTTTCCTTCTGGTTTTTGCCGGTATCATCT GGCGCGAAGTGATTGCAGGCAAGAATACGCGAAACCTGAAAGTAGCCGCTGCTGTCTCGGTCCTTGCCCTGGCGAATGTC GGATTTCATTGGAGCGAAATCATAAATGGTGGCCTGCCGCAGATGGCGATAAGGACGGGACTGGCCGCGCTGATTTTTCT GATCCTGCTGATCGGCGGGCGGATCACCCCGAGTTTTACGCGCAACTGGCTCGCCAGACGGGGCGGCGCGATGCCGGCCC CGTTTGACCGGTATGACGGCATGGCGCTGCTTTTTTCCCTCGCTGCCCTTGCGGTTTGGGCGCTCTTCGGGGACCGCGCA TTGTCATCCGGACTACTTGTATTGGCGGGTGCCCTCAATATCGTTCGACTCGCAAGATGGCAGGGGCAGCGAACGCTCGC TGAACCCCTCGTGACCATTCTGCATATCGGATTTGCCTGGGCGGCGCTGGCGCTCATCCTTCTCGGCCTGAGCGGTATTT TCCCGGCCGGCGTTCCGAGTGTCGCAGGCATTCACGCGGCCGGCGCAGGCGCGGTTGGCGTCATGACCTTGGCGGTCATG ACGCGGGCAAGTCTGGGGCACACGGGTCACGTCCTGCATGCAGGGTGGGGGACAGTGCTGGTATATGGATTGGTCAATGC CGGCGCGATCACGCGTGTGGTGGCGCCGTTCCTCGACGGGGCACTTCAAGCGCCGGTCAATTATGTCGCAAGTGGATTTT GGGCAGGCGCATTCGCGCTTTTCGCAATGGTCTACGGCCCGAGGTTGTTGGCACCGCGGCCTGATCCTGTGCCTTGA
Upstream 100 bases:
>100_bases GAAATGTGGTCAGAAAGCACTGATCCGTAAGGAAGGCTGTGACACCTGTCTCGAGTGCGGCCATTCGAAATGCGGGTAAA TTTGAAAAGGGATATGCAGA
Downstream 100 bases:
>100_bases CGGGTCCGGACCGGTCACTTGACTCCCATCAATCCGGCGACGCGCGAGCGTCAAAGACCCTGGGCGGCACGCAGCATAGC GTGTTGGAAATTCGCTCCGA
Product: NnrS family protein
Products: NA
Alternate protein names: NnrS Protein; Protein Involved In Response NO; Heme/Copper Membrane Protein; NnrS Transmembrane Protein; Transmembrane Protein; Heme-Cu-Containing Membrane Protein; Heme/Copper Membrane Protein Of NnrS Family Protein; Heme-Cu Protein NnrS; Nitrite And/Or Nitric Oxide Reductase; NnrS-Like Protein; Asparagine Synthetase B; ATP Synthase F0 Subunit A; Heme-Cu Membrane Protein; LOW QUALITY PROTEIN NnrS Family Protein; Nnrs Family Protein; NnrS Protein Superfamily; Asparagine Synthetase
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MATSAEQIRAYRGPALFSLGLRPFFLLGAIWAAIAIPLWIATYAFGPVALSVEAGLAFHVHEMVFGYGSAIVAGFLLTAV PNWTGRLPVCGQPLMILVAIWIAGRIAMLVQPDPAWLAGAIESAFLLVFAGIIWREVIAGKNTRNLKVAAAVSVLALANV GFHWSEIINGGLPQMAIRTGLAALIFLILLIGGRITPSFTRNWLARRGGAMPAPFDRYDGMALLFSLAALAVWALFGDRA LSSGLLVLAGALNIVRLARWQGQRTLAEPLVTILHIGFAWAALALILLGLSGIFPAGVPSVAGIHAAGAGAVGVMTLAVM TRASLGHTGHVLHAGWGTVLVYGLVNAGAITRVVAPFLDGALQAPVNYVASGFWAGAFALFAMVYGPRLLAPRPDPVP
Sequences:
>Translated_398_residues MATSAEQIRAYRGPALFSLGLRPFFLLGAIWAAIAIPLWIATYAFGPVALSVEAGLAFHVHEMVFGYGSAIVAGFLLTAV PNWTGRLPVCGQPLMILVAIWIAGRIAMLVQPDPAWLAGAIESAFLLVFAGIIWREVIAGKNTRNLKVAAAVSVLALANV GFHWSEIINGGLPQMAIRTGLAALIFLILLIGGRITPSFTRNWLARRGGAMPAPFDRYDGMALLFSLAALAVWALFGDRA LSSGLLVLAGALNIVRLARWQGQRTLAEPLVTILHIGFAWAALALILLGLSGIFPAGVPSVAGIHAAGAGAVGVMTLAVM TRASLGHTGHVLHAGWGTVLVYGLVNAGAITRVVAPFLDGALQAPVNYVASGFWAGAFALFAMVYGPRLLAPRPDPVP >Mature_397_residues ATSAEQIRAYRGPALFSLGLRPFFLLGAIWAAIAIPLWIATYAFGPVALSVEAGLAFHVHEMVFGYGSAIVAGFLLTAVP NWTGRLPVCGQPLMILVAIWIAGRIAMLVQPDPAWLAGAIESAFLLVFAGIIWREVIAGKNTRNLKVAAAVSVLALANVG FHWSEIINGGLPQMAIRTGLAALIFLILLIGGRITPSFTRNWLARRGGAMPAPFDRYDGMALLFSLAALAVWALFGDRAL SSGLLVLAGALNIVRLARWQGQRTLAEPLVTILHIGFAWAALALILLGLSGIFPAGVPSVAGIHAAGAGAVGVMTLAVMT RASLGHTGHVLHAGWGTVLVYGLVNAGAITRVVAPFLDGALQAPVNYVASGFWAGAFALFAMVYGPRLLAPRPDPVP
Specific function: Unknown
COG id: COG3213
COG function: function code P; Uncharacterized protein involved in response to NO
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41714; Mature: 41583
Theoretical pI: Translated: 10.98; Mature: 10.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSAEQIRAYRGPALFSLGLRPFFLLGAIWAAIAIPLWIATYAFGPVALSVEAGLAFHV CCCCHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHH HEMVFGYGSAIVAGFLLTAVPNWTGRLPVCGQPLMILVAIWIAGRIAMLVQPDPAWLAGA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCHHHHHHH IESAFLLVFAGIIWREVIAGKNTRNLKVAAAVSVLALANVGFHWSEIINGGLPQMAIRTG HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHH LAALIFLILLIGGRITPSFTRNWLARRGGAMPAPFDRYDGMALLFSLAALAVWALFGDRA HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LSSGLLVLAGALNIVRLARWQGQRTLAEPLVTILHIGFAWAALALILLGLSGIFPAGVPS HHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC VAGIHAAGAGAVGVMTLAVMTRASLGHTGHVLHAGWGTVLVYGLVNAGAITRVVAPFLDG CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHCCHHHHHHHHHHHHH ALQAPVNYVASGFWAGAFALFAMVYGPRLLAPRPDPVP HHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCC >Mature Secondary Structure ATSAEQIRAYRGPALFSLGLRPFFLLGAIWAAIAIPLWIATYAFGPVALSVEAGLAFHV CCCHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHH HEMVFGYGSAIVAGFLLTAVPNWTGRLPVCGQPLMILVAIWIAGRIAMLVQPDPAWLAGA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCHHHHHHH IESAFLLVFAGIIWREVIAGKNTRNLKVAAAVSVLALANVGFHWSEIINGGLPQMAIRTG HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHH LAALIFLILLIGGRITPSFTRNWLARRGGAMPAPFDRYDGMALLFSLAALAVWALFGDRA HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LSSGLLVLAGALNIVRLARWQGQRTLAEPLVTILHIGFAWAALALILLGLSGIFPAGVPS HHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC VAGIHAAGAGAVGVMTLAVMTRASLGHTGHVLHAGWGTVLVYGLVNAGAITRVVAPFLDG CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHCCHHHHHHHHHHHHH ALQAPVNYVASGFWAGAFALFAMVYGPRLLAPRPDPVP HHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA