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The map label for this gene is yfiO [C]

Identifier: 114798667

GI number: 114798667

Start: 380786

End: 381619

Strand: Reverse

Name: yfiO [C]

Synonym: HNE_0387

Alternate gene names: 114798667

Gene position: 381619-380786 (Counterclockwise)

Preceding gene: 114800236

Following gene: 114799211

Centisome position: 10.3

GC content: 62.47

Gene sequence:

>834_bases
ATGCCGAAACTGACGCCCCTTCCCCTCGTGATTCTGGCCGGTGCCCTTCTCATCACCGCCTGCTCCTCCACGCGCCGGAA
CCCGGAACTCGCCTATGTCGAGCGCCCCGTCGAACAGCTTTACAATCAGGGGACCGACCGGCTCGATCGCCGCGATTATA
CGCGCGCCAAACTGTTCTTCGAGGAAGTCGAGCGCCAGCACCCCTATTCCGAATGGGCCCGCCGCGCGATGGTCATGTCG
GCCTATGCCTCCTATCGCTCGCGCGACTACACCACATCCATCACCGGGGCAGAACGCTATCTCTCGCTTCATCCGGGCGG
CTCGGAAGCCGAATACGCCTACTATCTGATAGCGCTGAACCATTTCGACCAGATCACCGATGTTGGCCGCGACCAGGCCA
CAACCGAAAGCGCGCGTAACGCGCTGCTTGAAGTCATCCGCCGCTATCCTGAAAGCGAATACGCCCGCGATGCGCGCGTG
AAGCTGGACATGGTCAACGATCAGCTGGCCGGTAAGGAAATGACCGTCGGCCGCTGGTATCTGCGCTCGAACCAGACCCT
CGCCGCGGTCAACCGCTTCCGCAAGGTCGTGACCGATTACCAGACCACCTCCCACTCCGAGGAAGCCCTCCACCGCCTCG
TCGAAGCCTATCTGACGCTGGGCCTGCGCGATCAGGCCGTCGTGGCCGGGGCAACGCTCGGTCATAACTATCCGGGCAGC
GACTGGTATCAGATGAGCTACCGGCTGCTGACCAATGAAGGGCTGAACCCCGAAGCGGTTGACGAAACCACGCGCCGGAC
CTTCCTCCAGCGGCTGATCCCCGGCGGCAAATAA

Upstream 100 bases:

>100_bases
CCCGCCGCAGTTGCCCAAGATGACAAACGGCCTTGGAAACCGCGCACATTCCGGTCTAATCAAGCTGACGAATTGTTCTG
ACAGCGCGAGGCCGCACTGC

Downstream 100 bases:

>100_bases
CCCGCCGGGCCCCTGCCCCTCAGGTCTCCCCGATCAGGGCGAGCCATTCATCTTCCGTCATCACCGCGAGGCCGAGCTGC
TCGGCCTTGACGAGCTTTGA

Product: putative competence lipoprotein ComL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MPKLTPLPLVILAGALLITACSSTRRNPELAYVERPVEQLYNQGTDRLDRRDYTRAKLFFEEVERQHPYSEWARRAMVMS
AYASYRSRDYTTSITGAERYLSLHPGGSEAEYAYYLIALNHFDQITDVGRDQATTESARNALLEVIRRYPESEYARDARV
KLDMVNDQLAGKEMTVGRWYLRSNQTLAAVNRFRKVVTDYQTTSHSEEALHRLVEAYLTLGLRDQAVVAGATLGHNYPGS
DWYQMSYRLLTNEGLNPEAVDETTRRTFLQRLIPGGK

Sequences:

>Translated_277_residues
MPKLTPLPLVILAGALLITACSSTRRNPELAYVERPVEQLYNQGTDRLDRRDYTRAKLFFEEVERQHPYSEWARRAMVMS
AYASYRSRDYTTSITGAERYLSLHPGGSEAEYAYYLIALNHFDQITDVGRDQATTESARNALLEVIRRYPESEYARDARV
KLDMVNDQLAGKEMTVGRWYLRSNQTLAAVNRFRKVVTDYQTTSHSEEALHRLVEAYLTLGLRDQAVVAGATLGHNYPGS
DWYQMSYRLLTNEGLNPEAVDETTRRTFLQRLIPGGK
>Mature_276_residues
PKLTPLPLVILAGALLITACSSTRRNPELAYVERPVEQLYNQGTDRLDRRDYTRAKLFFEEVERQHPYSEWARRAMVMSA
YASYRSRDYTTSITGAERYLSLHPGGSEAEYAYYLIALNHFDQITDVGRDQATTESARNALLEVIRRYPESEYARDARVK
LDMVNDQLAGKEMTVGRWYLRSNQTLAAVNRFRKVVTDYQTTSHSEEALHRLVEAYLTLGLRDQAVVAGATLGHNYPGSD
WYQMSYRLLTNEGLNPEAVDETTRRTFLQRLIPGGK

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=232, Percent_Identity=22.4137931034483, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31744; Mature: 31613

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00191 CYTOCHROME_B5_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKLTPLPLVILAGALLITACSSTRRNPELAYVERPVEQLYNQGTDRLDRRDYTRAKLFF
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
EEVERQHPYSEWARRAMVMSAYASYRSRDYTTSITGAERYLSLHPGGSEAEYAYYLIALN
HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHEEEECCCCCCCCEEEEEEEHH
HFDQITDVGRDQATTESARNALLEVIRRYPESEYARDARVKLDMVNDQLAGKEMTVGRWY
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEEHHHHHCCCCEEHHEEE
LRSNQTLAAVNRFRKVVTDYQTTSHSEEALHRLVEAYLTLGLRDQAVVAGATLGHNYPGS
EECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHEEHHHHCCCCCCC
DWYQMSYRLLTNEGLNPEAVDETTRRTFLQRLIPGGK
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PKLTPLPLVILAGALLITACSSTRRNPELAYVERPVEQLYNQGTDRLDRRDYTRAKLFF
CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
EEVERQHPYSEWARRAMVMSAYASYRSRDYTTSITGAERYLSLHPGGSEAEYAYYLIALN
HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHEEEECCCCCCCCEEEEEEEHH
HFDQITDVGRDQATTESARNALLEVIRRYPESEYARDARVKLDMVNDQLAGKEMTVGRWY
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEEHHHHHCCCCEEHHEEE
LRSNQTLAAVNRFRKVVTDYQTTSHSEEALHRLVEAYLTLGLRDQAVVAGATLGHNYPGS
EECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHEEHHHHCCCCCCC
DWYQMSYRLLTNEGLNPEAVDETTRRTFLQRLIPGGK
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]