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The map label for this gene is ypfJ [H]

Identifier: 114798622

GI number: 114798622

Start: 3041912

End: 3042757

Strand: Direct

Name: ypfJ [H]

Synonym: HNE_2884

Alternate gene names: 114798622

Gene position: 3041912-3042757 (Clockwise)

Preceding gene: 114798212

Following gene: 114799633

Centisome position: 82.1

GC content: 63.95

Gene sequence:

>846_bases
ATGAAATGGCAGGGCGGACGCAGAGGCGGAAACATCGAGGACCGGCGCGGCATGAGCGCGGGCGCGGTTGCCGGTGGCGG
CGGCATAGGTGTCATCATCATCGCGCTGATCGGCTATTTCGTGTTCGGCATGGAGCCTCAGCAGATCGCGGAGATAACAA
GCCAGCAGCAGGGCGGCGCCAGCCAGCAGGCCGGCGTTGAAGGCACGCCCGAGGATGAAGCGGGCCTCTTCGTCGATGTC
ATCGGCGCCAATATCAATGATGTCTGGGGCGGCGCGCTGGAAGGCTACACCCCGCCCCGCGTCGTTCTCTATGAGCAGGG
CACCGATACCGGCTGCGGCTTCGGCCAATCTGCCATGGGACCATTCTATTGTCCGGCTGACCAGAGCGTCTATCTCGACC
TCGGCTTCTGGCGCGATATGGAAACCCAGCTGGGTGCCTCGGGCGCCGAGTTCGCCCGCGCCTATGTCATCGCCCATGAA
TTCGGCCACCATGTCCAGACGCTGACCGGCGCTTCCCAGCAAGCCCGTCAGGCGCAGCAGCAGGCCCGCAGCCAGGAAGA
AGCCAACCAGTATTCCATCGCGCTGGAACTTCAGGCCGACTGTTATGCCGGCTTCTGGGCGGCCAACGCGGCCAGCGCAT
CAAGCGGCGCTGTCGCGCTGGAGCCGGGCGATCTGGAAGAAGGCCTTAAAACCGCAAACGCCATCGGCGACGACATGATC
CAGAAGCGCACCCAGGGCCATGTGACCCCGGAAAACTTCACCCATGGCACGGCCGAGCAGCGCATGACTTGGCTGCGCCG
GGGCTATGACAGCGGCGATCCAAACGTCTGCAACACCTCTAACTGA

Upstream 100 bases:

>100_bases
ACCTTGCCACGACAGGCAATGCTGGCATGCTCCCCCCACTTGCCTGTAGACATATCGAAAGCAAATTTTACCGGTCGCGG
CCGGACAGGGAGAGTTGCAG

Downstream 100 bases:

>100_bases
TCCGGCTCCGGATCACACCACCTGACCAAAAAACTAAAAGGGAGTAAGCCGATGACTGACGGCGTATACAAAGACTTTGC
CACCACCCAGATCCATGCCG

Product: putative neutral zinc metallopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MKWQGGRRGGNIEDRRGMSAGAVAGGGGIGVIIIALIGYFVFGMEPQQIAEITSQQQGGASQQAGVEGTPEDEAGLFVDV
IGANINDVWGGALEGYTPPRVVLYEQGTDTGCGFGQSAMGPFYCPADQSVYLDLGFWRDMETQLGASGAEFARAYVIAHE
FGHHVQTLTGASQQARQAQQQARSQEEANQYSIALELQADCYAGFWAANAASASSGAVALEPGDLEEGLKTANAIGDDMI
QKRTQGHVTPENFTHGTAEQRMTWLRRGYDSGDPNVCNTSN

Sequences:

>Translated_281_residues
MKWQGGRRGGNIEDRRGMSAGAVAGGGGIGVIIIALIGYFVFGMEPQQIAEITSQQQGGASQQAGVEGTPEDEAGLFVDV
IGANINDVWGGALEGYTPPRVVLYEQGTDTGCGFGQSAMGPFYCPADQSVYLDLGFWRDMETQLGASGAEFARAYVIAHE
FGHHVQTLTGASQQARQAQQQARSQEEANQYSIALELQADCYAGFWAANAASASSGAVALEPGDLEEGLKTANAIGDDMI
QKRTQGHVTPENFTHGTAEQRMTWLRRGYDSGDPNVCNTSN
>Mature_281_residues
MKWQGGRRGGNIEDRRGMSAGAVAGGGGIGVIIIALIGYFVFGMEPQQIAEITSQQQGGASQQAGVEGTPEDEAGLFVDV
IGANINDVWGGALEGYTPPRVVLYEQGTDTGCGFGQSAMGPFYCPADQSVYLDLGFWRDMETQLGASGAEFARAYVIAHE
FGHHVQTLTGASQQARQAQQQARSQEEANQYSIALELQADCYAGFWAANAASASSGAVALEPGDLEEGLKTANAIGDDMI
QKRTQGHVTPENFTHGTAEQRMTWLRRGYDSGDPNVCNTSN

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=293, Percent_Identity=47.098976109215, Blast_Score=253, Evalue=9e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 29822; Mature: 29822

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWQGGRRGGNIEDRRGMSAGAVAGGGGIGVIIIALIGYFVFGMEPQQIAEITSQQQGGA
CCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
SQQAGVEGTPEDEAGLFVDVIGANINDVWGGALEGYTPPRVVLYEQGTDTGCGFGQSAMG
CCCCCCCCCCCCCCCEEEEEECCCCHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC
PFYCPADQSVYLDLGFWRDMETQLGASGAEFARAYVIAHEFGHHVQTLTGASQQARQAQQ
CEECCCCCEEEEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
QARSQEEANQYSIALELQADCYAGFWAANAASASSGAVALEPGDLEEGLKTANAIGDDMI
HHHHHHHHCCEEEEEEEECCHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHH
QKRTQGHVTPENFTHGTAEQRMTWLRRGYDSGDPNVCNTSN
HHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKWQGGRRGGNIEDRRGMSAGAVAGGGGIGVIIIALIGYFVFGMEPQQIAEITSQQQGGA
CCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
SQQAGVEGTPEDEAGLFVDVIGANINDVWGGALEGYTPPRVVLYEQGTDTGCGFGQSAMG
CCCCCCCCCCCCCCCEEEEEECCCCHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC
PFYCPADQSVYLDLGFWRDMETQLGASGAEFARAYVIAHEFGHHVQTLTGASQQARQAQQ
CEECCCCCEEEEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
QARSQEEANQYSIALELQADCYAGFWAANAASASSGAVALEPGDLEEGLKTANAIGDDMI
HHHHHHHHCCEEEEEEEECCHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHH
QKRTQGHVTPENFTHGTAEQRMTWLRRGYDSGDPNVCNTSN
HHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]