| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is ccrM [H]
Identifier: 114798609
GI number: 114798609
Start: 1968462
End: 1969544
Strand: Reverse
Name: ccrM [H]
Synonym: HNE_1901
Alternate gene names: 114798609
Gene position: 1969544-1968462 (Counterclockwise)
Preceding gene: 114798617
Following gene: 114800225
Centisome position: 53.16
GC content: 61.31
Gene sequence:
>1083_bases ATGACCATTCAGCGTAACACGATCATCCAGGGCGATTGCATCGAGGTCCTGTCCCGTATTCCGGACAAGTCCGTCGATCT CGTCTTTGCCGATCCCCCGTATAACCTTCAGCTCGGCGGCGGGCTGACGCGCCCGGATCAGTCCGTGGTAGACGGTGTTG ACGACGAATGGGACAAATTCGCCAGCTTTGACGACTATGATCTGTTTACGCATCAATGGCTGGAAGAATGCCGCCGTGTC CTGAAGGATGACGGCGCCATCTGGGTGATCGGCTCCTATCACAATATTTTCCGTGTCGGGACGGTTCTTCAGGATCAGGG CTTCTGGATTCAGAATGACGTGATCTGGCTGAAATCAAACCCGATGCCGAATTTCAAGGGCACGCGCTTCCAGAACGCGC ATGAAACGCTGATCTGGGCGGGCAAGTCGAAGGACAGCCGCGTTACCTTTAACTATGACGCGCTAAAAACCTTCAATGAA GACAAACAGATGCGGTCTGACTGGACGATCCCCCTCTGCACCGGTGGCGAGCGTCTGAAAGATGAGGCCGGCCGCAAGGC GCATCCGACCCAGAAACCGGAATCCCTGCTTCACCGCGTCCTGCTTGCCACGTCCAATCCGCGCGATCTCGTCCTTGATC CGTTCTCCGGCACCGGCACGACAGCCGCTGCTGCCCGCCGCCTCGGCCGCGATTTCATCGGCATCGAGCGCGAAGAGGGC TACGCCCGCCTCTCGCGGGCCCGCATCAACGCGATCACGCCGCTGGAAGGCGAAGTGCTGGAAACAGAGCGCAGCAAGAA ATCACTCGCCCGCGTGCCGTTCGGCGCCCTGATCGAAACCGGCTGGCTGAAGCCCGGCGACCGCCTCTTCTCCGCCCAGC GCCGCCACCAGGCCCGCATCCGCGTCGATGGATCGCTCACCACAGGCGCCATCACCGGCTCGATCCACCGCCTCGGGGCG CAGGTCCAGCAGGCCCCCGCCTGCAATGGCTGGACTTACTGGCACTACGAAACCGACAAGCGCGACCTTGCGCCGATCGA TCTTCTGCGCCGCCGTTACCGTGAAGAGATGGGCCTCGCCTGA
Upstream 100 bases:
>100_bases CGCTGGTAACCTTTCGGCAGGGTTTCCTTCACTGAGTAGTAACCGGCGCGATTCAGGGTCGTCTGCAACACTCACAGTAG AGTCGCAGGGCGAACGATCC
Downstream 100 bases:
>100_bases GACCTTCCGTTCACGAATAGCTTGTGAGAATCTCGTCCAGGGCGCGCTCAAGATCCTTGATCGTCGCCACATGGCTCATC TGTTTGCAATAGGGCGCATA
Product: modification methylase CcrM
Products: NA
Alternate protein names: M.CcrMI; Adenine-specific methyltransferase CcrMI [H]
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MTIQRNTIIQGDCIEVLSRIPDKSVDLVFADPPYNLQLGGGLTRPDQSVVDGVDDEWDKFASFDDYDLFTHQWLEECRRV LKDDGAIWVIGSYHNIFRVGTVLQDQGFWIQNDVIWLKSNPMPNFKGTRFQNAHETLIWAGKSKDSRVTFNYDALKTFNE DKQMRSDWTIPLCTGGERLKDEAGRKAHPTQKPESLLHRVLLATSNPRDLVLDPFSGTGTTAAAARRLGRDFIGIEREEG YARLSRARINAITPLEGEVLETERSKKSLARVPFGALIETGWLKPGDRLFSAQRRHQARIRVDGSLTTGAITGSIHRLGA QVQQAPACNGWTYWHYETDKRDLAPIDLLRRRYREEMGLA
Sequences:
>Translated_360_residues MTIQRNTIIQGDCIEVLSRIPDKSVDLVFADPPYNLQLGGGLTRPDQSVVDGVDDEWDKFASFDDYDLFTHQWLEECRRV LKDDGAIWVIGSYHNIFRVGTVLQDQGFWIQNDVIWLKSNPMPNFKGTRFQNAHETLIWAGKSKDSRVTFNYDALKTFNE DKQMRSDWTIPLCTGGERLKDEAGRKAHPTQKPESLLHRVLLATSNPRDLVLDPFSGTGTTAAAARRLGRDFIGIEREEG YARLSRARINAITPLEGEVLETERSKKSLARVPFGALIETGWLKPGDRLFSAQRRHQARIRVDGSLTTGAITGSIHRLGA QVQQAPACNGWTYWHYETDKRDLAPIDLLRRRYREEMGLA >Mature_359_residues TIQRNTIIQGDCIEVLSRIPDKSVDLVFADPPYNLQLGGGLTRPDQSVVDGVDDEWDKFASFDDYDLFTHQWLEECRRVL KDDGAIWVIGSYHNIFRVGTVLQDQGFWIQNDVIWLKSNPMPNFKGTRFQNAHETLIWAGKSKDSRVTFNYDALKTFNED KQMRSDWTIPLCTGGERLKDEAGRKAHPTQKPESLLHRVLLATSNPRDLVLDPFSGTGTTAAAARRLGRDFIGIEREEGY ARLSRARINAITPLEGEVLETERSKKSLARVPFGALIETGWLKPGDRLFSAQRRHQARIRVDGSLTTGAITGSIHRLGAQ VQQAPACNGWTYWHYETDKRDLAPIDLLRRRYREEMGLA
Specific function: This methylase recognizes the double-stranded sequence GANTC and causes specific methylation on A-2 on both strands. Ccrm-mediated methylation has important cellular functions. Appears to contribute to the accurate cell-cycle control of DNA replication an
COG id: COG0863
COG function: function code L; DNA modification methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI87082238, Length=288, Percent_Identity=31.25, Blast_Score=126, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002941 - InterPro: IPR002052 - InterPro: IPR001091 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 40884; Mature: 40752
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIQRNTIIQGDCIEVLSRIPDKSVDLVFADPPYNLQLGGGLTRPDQSVVDGVDDEWDKF CCCCCCCEECCHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCCCHHHHCCCCHHHHHH ASFDDYDLFTHQWLEECRRVLKDDGAIWVIGSYHNIFRVGTVLQDQGFWIQNDVIWLKSN CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHEEECCCCEEECCEEEEECC PMPNFKGTRFQNAHETLIWAGKSKDSRVTFNYDALKTFNEDKQMRSDWTIPLCTGGERLK CCCCCCCCCCCCCCCEEEEECCCCCCEEEEEHHHHHHCCHHHHHHCCCCEEEECCCHHHH DEAGRKAHPTQKPESLLHRVLLATSNPRDLVLDPFSGTGTTAAAARRLGRDFIGIEREEG HHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCHHHCCCCCHHH YARLSRARINAITPLEGEVLETERSKKSLARVPFGALIETGWLKPGDRLFSAQRRHQARI HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHCCEEE RVDGSLTTGAITGSIHRLGAQVQQAPACNGWTYWHYETDKRDLAPIDLLRRRYREEMGLA EECCCEECCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure TIQRNTIIQGDCIEVLSRIPDKSVDLVFADPPYNLQLGGGLTRPDQSVVDGVDDEWDKF CCCCCCEECCHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCCCHHHHCCCCHHHHHH ASFDDYDLFTHQWLEECRRVLKDDGAIWVIGSYHNIFRVGTVLQDQGFWIQNDVIWLKSN CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHEEECCCCEEECCEEEEECC PMPNFKGTRFQNAHETLIWAGKSKDSRVTFNYDALKTFNEDKQMRSDWTIPLCTGGERLK CCCCCCCCCCCCCCCEEEEECCCCCCEEEEEHHHHHHCCHHHHHHCCCCEEEECCCHHHH DEAGRKAHPTQKPESLLHRVLLATSNPRDLVLDPFSGTGTTAAAARRLGRDFIGIEREEG HHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCHHHCCCCCHHH YARLSRARINAITPLEGEVLETERSKKSLARVPFGALIETGWLKPGDRLFSAQRRHQARI HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHCCEEE RVDGSLTTGAITGSIHRLGAQVQQAPACNGWTYWHYETDKRDLAPIDLLRRRYREEMGLA EECCCEECCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8289276 [H]