| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798550
Identifier: 114798550
GI number: 114798550
Start: 1738502
End: 1739719
Strand: Reverse
Name: 114798550
Synonym: HNE_1695
Alternate gene names: NA
Gene position: 1739719-1738502 (Counterclockwise)
Preceding gene: 114798940
Following gene: 114797593
Centisome position: 46.96
GC content: 66.09
Gene sequence:
>1218_bases ATGTATTCTCCACTCAGAAACGGGCTGCTCTTCGCAGCCCTGGCGCTCGCGGCAGTCGCACTGCCGGCCGCATCTCAATC GCTTGAAGAACTCGATGCGCGTCTGCGCCAGCATCCATCGATAGAAGCCCTCACTCAACGAGCTGATGCGGGCCGCGAGC GGGCCGTCGCTGCGACCGCCCTGCCCGATCCCGTGGTCTCGCTCGGCGTCAACAATTTCCCGATCTTCGATCCGTCGTTC AACGCGTTCCTCCCGACCAACAAGGCCGTCGGTGTCAGCCAGGCCATTCCCAGCCGTGCGGGCCGCGAGGCTCGATCCGG CGAGGCACGCGCCATGGCTGTGCAAACCGATCGGCTGCGGGACGCCCAGCTGGCGATGCTGCACGGCGAACTCGTCGCAC TGCTTCACGAGAAGCAAAGCATCGCCGGCCAGCAGGAACTCGCAGAAAGCCGCCGCGTAAAATATGACGAACTGACAGAG GTTGCCGCGGCCGAAATCGATGCTGGGCGTCCTGCCGTTTTCCGGCTCGCCGAGATCGAGGCTGAACGCACCCGCGTCGC CCGAGAGCTCGTCGTCCTGAAGCAGCGTGAGGCTGAAATCGATGCGCGCCTTGTCGACCTGACAGGTCTCGTGCCGACTA CCCCCGCGCCGCCGGTCGAGCCTGCCAGCTGGAGCGGCGAGGCCCGCGACTTTCACGCCGTCCGGGTCGCCGAGGCCGGG ATGGATGTCGCAGGCTACGCCATCGACGGCGCAGAGGCGGCCTGGAAACCCAACTGGGGCGCGCAGCTGACCTATCAGCA GCGCGACGCGGGCGCCAACTTTGCGGGTGATGACTGGGTCTCAGGCATGGTGACCTTCAGCGTTCCATTCTGGTCCGGCC GCAGTCAGGCGCCGCGACTGCGGGCCGCGAAAGCCGACCGGGCGAGCGCCGAAATGCAGTATCAGGCTGCTGCCCGCAGC GCTGCCGCCCGGTACGCTGCCGAAACAGCCGCCTGGAAGGCTGCGAAAGAAACGATTGCGGTCCTCGCGCAAAACATCGC CGCCGTGGACGACGAGATCGCCGCTCAATTGACGATCTACGAGTCCGGCGTCGGCACCTATGCCCCGATCATCGACGGCG AGATCGCGATCCTTAAACTGCGTGCGGATATCGCCGCCGAAGAGGCGCGCAGGGCGGGGGCCGCGTCGCGTATCAACGCC CTTCTGGTGCAACCATGA
Upstream 100 bases:
>100_bases TACGCCGATTTCCCTGAAGCAGCGCCTGCAGATCTGAGACGGAGCGGCCCGCAAACGCGGTGTCTAGCCCCTCGTCTCAA ACCATCAAGGCGCTACTCCC
Downstream 100 bases:
>100_bases ACCGCCGCCTTCTCCTCCTCACCGTTGCGACTTCCGCCGCGCTGCTTGCCGCCTGCAGCGATGCCTCTGGCGTGCGCTCC CAGGGCAGCTCTGCGGGCGC
Product: outer membrane efflux protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MYSPLRNGLLFAALALAAVALPAASQSLEELDARLRQHPSIEALTQRADAGRERAVAATALPDPVVSLGVNNFPIFDPSF NAFLPTNKAVGVSQAIPSRAGREARSGEARAMAVQTDRLRDAQLAMLHGELVALLHEKQSIAGQQELAESRRVKYDELTE VAAAEIDAGRPAVFRLAEIEAERTRVARELVVLKQREAEIDARLVDLTGLVPTTPAPPVEPASWSGEARDFHAVRVAEAG MDVAGYAIDGAEAAWKPNWGAQLTYQQRDAGANFAGDDWVSGMVTFSVPFWSGRSQAPRLRAAKADRASAEMQYQAAARS AAARYAAETAAWKAAKETIAVLAQNIAAVDDEIAAQLTIYESGVGTYAPIIDGEIAILKLRADIAAEEARRAGAASRINA LLVQP
Sequences:
>Translated_405_residues MYSPLRNGLLFAALALAAVALPAASQSLEELDARLRQHPSIEALTQRADAGRERAVAATALPDPVVSLGVNNFPIFDPSF NAFLPTNKAVGVSQAIPSRAGREARSGEARAMAVQTDRLRDAQLAMLHGELVALLHEKQSIAGQQELAESRRVKYDELTE VAAAEIDAGRPAVFRLAEIEAERTRVARELVVLKQREAEIDARLVDLTGLVPTTPAPPVEPASWSGEARDFHAVRVAEAG MDVAGYAIDGAEAAWKPNWGAQLTYQQRDAGANFAGDDWVSGMVTFSVPFWSGRSQAPRLRAAKADRASAEMQYQAAARS AAARYAAETAAWKAAKETIAVLAQNIAAVDDEIAAQLTIYESGVGTYAPIIDGEIAILKLRADIAAEEARRAGAASRINA LLVQP >Mature_405_residues MYSPLRNGLLFAALALAAVALPAASQSLEELDARLRQHPSIEALTQRADAGRERAVAATALPDPVVSLGVNNFPIFDPSF NAFLPTNKAVGVSQAIPSRAGREARSGEARAMAVQTDRLRDAQLAMLHGELVALLHEKQSIAGQQELAESRRVKYDELTE VAAAEIDAGRPAVFRLAEIEAERTRVARELVVLKQREAEIDARLVDLTGLVPTTPAPPVEPASWSGEARDFHAVRVAEAG MDVAGYAIDGAEAAWKPNWGAQLTYQQRDAGANFAGDDWVSGMVTFSVPFWSGRSQAPRLRAAKADRASAEMQYQAAARS AAARYAAETAAWKAAKETIAVLAQNIAAVDDEIAAQLTIYESGVGTYAPIIDGEIAILKLRADIAAEEARRAGAASRINA LLVQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43221; Mature: 43221
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSPLRNGLLFAALALAAVALPAASQSLEELDARLRQHPSIEALTQRADAGRERAVAATA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHEEEECC LPDPVVSLGVNNFPIFDPSFNAFLPTNKAVGVSQAIPSRAGREARSGEARAMAVQTDRLR CCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEHHHCC DAQLAMLHGELVALLHEKQSIAGQQELAESRRVKYDELTEVAAAEIDAGRPAVFRLAEIE HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEHHHHHH AERTRVARELVVLKQREAEIDARLVDLTGLVPTTPAPPVEPASWSGEARDFHAVRVAEAG HHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHEEEHHHCC MDVAGYAIDGAEAAWKPNWGAQLTYQQRDAGANFAGDDWVSGMVTFSVPFWSGRSQAPRL CCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHCCEEEEEEECCCCCCCCCCH RAAKADRASAEMQYQAAARSAAARYAAETAAWKAAKETIAVLAQNIAAVDDEIAAQLTIY HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHEEEEEE ESGVGTYAPIIDGEIAILKLRADIAAEEARRAGAASRINALLVQP ECCCCCCCCEECCCEEEEEEEHHHHHHHHHHCCCHHHCCEEEECC >Mature Secondary Structure MYSPLRNGLLFAALALAAVALPAASQSLEELDARLRQHPSIEALTQRADAGRERAVAATA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHEEEECC LPDPVVSLGVNNFPIFDPSFNAFLPTNKAVGVSQAIPSRAGREARSGEARAMAVQTDRLR CCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEHHHCC DAQLAMLHGELVALLHEKQSIAGQQELAESRRVKYDELTEVAAAEIDAGRPAVFRLAEIE HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEHHHHHH AERTRVARELVVLKQREAEIDARLVDLTGLVPTTPAPPVEPASWSGEARDFHAVRVAEAG HHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHEEEHHHCC MDVAGYAIDGAEAAWKPNWGAQLTYQQRDAGANFAGDDWVSGMVTFSVPFWSGRSQAPRL CCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHCCEEEEEEECCCCCCCCCCH RAAKADRASAEMQYQAAARSAAARYAAETAAWKAAKETIAVLAQNIAAVDDEIAAQLTIY HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHEEEEEE ESGVGTYAPIIDGEIAILKLRADIAAEEARRAGAASRINALLVQP ECCCCCCCCEECCCEEEEEEEHHHHHHHHHHCCCHHHCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA