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The map label for this gene is ylbK [H]

Identifier: 114798540

GI number: 114798540

Start: 539707

End: 541944

Strand: Reverse

Name: ylbK [H]

Synonym: HNE_0544

Alternate gene names: 114798540

Gene position: 541944-539707 (Counterclockwise)

Preceding gene: 114799066

Following gene: 114798402

Centisome position: 14.63

GC content: 63.23

Gene sequence:

>2238_bases
ATGACGCAGACCATCTCCCGGACCCCCGCCCTCAGGCTCACAATGCAGGCTCTGGCCGTACTTTCACTGCTGACATTTGC
CGCCATTGCCAGCGCGCAGGACGCCCCCGAAAGCCAACCCGGCCGGCCAAAAGTCGCCCTTGTTCTCTCCGGCGGCGGGG
CACTCGGTCTCTCGCATGTCGGCGCGATCCAGGAGTTGGAAGCCATGGGCATCCGGCCCGACATCGTGGTGGGCACCTCG
ATGGGCGCGGTCATTGGCGGCCTCTATGCCTCCGGCCTCAGCAGCGCCGAGCTGGAGGAGGTCGTCAACAGCGCCAACTG
GAGCGGCGTGTTCAACCCCGCGCCCCAGCGCGACAAGCTGACCTTTCGGCAGAAGCAGCAGCAGGTGGACTTTCCGGGCA
CTGCGAGCCTCGGCGTTTCCGGCGCGGGGCTTCTCCTGCCGACCGGCGCGATCTCAGATCAGGCGCTGATGAAAGAGCTG
CGCCGGGTCACGCCCGCGCGGATGGAAGTGGATAATTTTGACGACCTGACCATTCCGTTCCGCGCCGTAGCCACCGACAT
CGCAACCGGGGAAGCCGTGGTCATCAGCGCCGGTGAACTGCCCATGGCGATGCGGGCCTCGATGTCGGTTCCAGGCGTCT
TTCCTGCCTTCGATCTGGATGGCAAATTGCTGGTGGATGGGGGCCTGGCGGCCAACATCCCGGTCAGCGTTGCGCGGGAG
ATGGGCGCCGACATCGTCATTGCACTCTGGACGCCGAATGAACTCCTCCAACAGGAACAGATCGGCTCGGTGGTCGATGT
GCTGTCACAGACCGTCAGTCTGCTGATCCTTGCCAATGAACGCGCCGAAATCGCTTCGATGCTTCCGCAGGATGTCCTGG
TCCGGGTGAATACCGGCAGCATCAGCCCGGCCGCCTTCACGCGCAGCAAGGAACTGATCGAGGCTGGCCGGGCATCGATC
CGTGCCGAGGCGGAAAAGTTCGCGCCCATCGCCCAGGGCCGCGAACCGGTCAGCTATGCCGGGATTGGCGATGCGCCCGC
GCCGGTTATCTCCTTCGTCCGTATCGAGAACGCCTCACGCCTCAACCAGTCCCTGCTGGAAGAACGTATGTCGAGCGTTC
TGGGCAAGCCGGCAGATACCAGCGAGATCAATGAAGCCCTCGACCGGATCTACGCGCTCGGCCCGTTCGAACGTGTCGAC
TATACGATGACAGAGCAGGACGGGCTGACAGGCCTGATCGTGCGCGCCGAAGATTCACGCCGCAATGTCGGGCGGCTCCG
TCTTGGCATGATCGTGGAAAACGATTTCAACACCGAATCCGATGTGGCCGTGTCGCTGGATTACCGCAGCCCGGCGCTGG
ACGCCTATGGCTCTGAACTGCGCGCGATCGCCACCATTGGCGACATCAACGAGTTTGGTGTTGAGTATTTCCGGCTGCTT
GAACCTGAGCAGAGCTGGTTTGCCGTCGCCCGCGCCGAGGTCGAGAACCGGCCGGTGAACATCTATACCAATCGCGGTTT
CAAGACGGCCGGATATGATCTCACCTATGGCCTTCTGGGCATTGATGCGGGCCGGCAGTTTGGAAACATTGCAGAGGTGC
GGGTGGGCACGGAGCTTGGCACCGGGCGCGCCAAGCTGAATGAAGGGGCAGCGCCGGTTGAAGAGGTCGACATCGATTCC
GGCCGCATCTTTGCCTCTGCCGGTCTCGACACGCTCGATAACCCGTTCTTTCCGCAAACAGGGCTCACCGCAAAGGCGCG
CTGGACGCACGGCTTGGAAAGCCTTGGCGACAATGCCGACTATCAGACACTGTCCGCCTCCGGGCTGCATGCCTTCACGA
TGGGCCGCAACACCCTGCTCACCTCGGTCTCGGGCGGCGTGCGGCTCAGCGGCGCGCCGCCTCTGGATACGCTCTACCGG
ATCGGCGGGCTGTTCAGCCTTTCGGGGTACCGTCTGGACGAACTTGCCGGCGAGAACTTTGTCGCCGGCCGCCTGATCTA
CCGACGTTCGCTGACCAACACCGAAGGCTCGCTGTTCGGAATACCCCTGTTCGTGGGCGGATCATTGGAGGCCGGCGAGG
TCTGGTCGAACCCGGATGAATTCTCGCTGGATGACATGCGCTTTGGCGGCAGTGTCTATGTCGGGGCCAACACCGCGCTT
GGACCGGTTTACCTTGCCTTCGGCAGGTCGGAAGGGGGGCGGCAATCGGCTTATCTGGTGATTGGCCGCTCGTTCTGA

Upstream 100 bases:

>100_bases
CTCATAATCGCGAGGTCGAGAGTTCAAGTCTCTCCCGAACCACCACGCCCAGCCAGCGATCCCTCTTGCGCCGCCGCGAA
ACTGGCCAGAGGATCACCTG

Downstream 100 bases:

>100_bases
GGCGGCCGGTCAGATCGCTTTGGCCTGCTTTTCACGGGGCGCGTTGAGCAGGGTATCGGCGAGCGCGGCCACGAGCGCAC
GCGGGCGGACAGGCTTTTCA

Product: patatin family phospholipase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 745; Mature: 744

Protein sequence:

>745_residues
MTQTISRTPALRLTMQALAVLSLLTFAAIASAQDAPESQPGRPKVALVLSGGGALGLSHVGAIQELEAMGIRPDIVVGTS
MGAVIGGLYASGLSSAELEEVVNSANWSGVFNPAPQRDKLTFRQKQQQVDFPGTASLGVSGAGLLLPTGAISDQALMKEL
RRVTPARMEVDNFDDLTIPFRAVATDIATGEAVVISAGELPMAMRASMSVPGVFPAFDLDGKLLVDGGLAANIPVSVARE
MGADIVIALWTPNELLQQEQIGSVVDVLSQTVSLLILANERAEIASMLPQDVLVRVNTGSISPAAFTRSKELIEAGRASI
RAEAEKFAPIAQGREPVSYAGIGDAPAPVISFVRIENASRLNQSLLEERMSSVLGKPADTSEINEALDRIYALGPFERVD
YTMTEQDGLTGLIVRAEDSRRNVGRLRLGMIVENDFNTESDVAVSLDYRSPALDAYGSELRAIATIGDINEFGVEYFRLL
EPEQSWFAVARAEVENRPVNIYTNRGFKTAGYDLTYGLLGIDAGRQFGNIAEVRVGTELGTGRAKLNEGAAPVEEVDIDS
GRIFASAGLDTLDNPFFPQTGLTAKARWTHGLESLGDNADYQTLSASGLHAFTMGRNTLLTSVSGGVRLSGAPPLDTLYR
IGGLFSLSGYRLDELAGENFVAGRLIYRRSLTNTEGSLFGIPLFVGGSLEAGEVWSNPDEFSLDDMRFGGSVYVGANTAL
GPVYLAFGRSEGGRQSAYLVIGRSF

Sequences:

>Translated_745_residues
MTQTISRTPALRLTMQALAVLSLLTFAAIASAQDAPESQPGRPKVALVLSGGGALGLSHVGAIQELEAMGIRPDIVVGTS
MGAVIGGLYASGLSSAELEEVVNSANWSGVFNPAPQRDKLTFRQKQQQVDFPGTASLGVSGAGLLLPTGAISDQALMKEL
RRVTPARMEVDNFDDLTIPFRAVATDIATGEAVVISAGELPMAMRASMSVPGVFPAFDLDGKLLVDGGLAANIPVSVARE
MGADIVIALWTPNELLQQEQIGSVVDVLSQTVSLLILANERAEIASMLPQDVLVRVNTGSISPAAFTRSKELIEAGRASI
RAEAEKFAPIAQGREPVSYAGIGDAPAPVISFVRIENASRLNQSLLEERMSSVLGKPADTSEINEALDRIYALGPFERVD
YTMTEQDGLTGLIVRAEDSRRNVGRLRLGMIVENDFNTESDVAVSLDYRSPALDAYGSELRAIATIGDINEFGVEYFRLL
EPEQSWFAVARAEVENRPVNIYTNRGFKTAGYDLTYGLLGIDAGRQFGNIAEVRVGTELGTGRAKLNEGAAPVEEVDIDS
GRIFASAGLDTLDNPFFPQTGLTAKARWTHGLESLGDNADYQTLSASGLHAFTMGRNTLLTSVSGGVRLSGAPPLDTLYR
IGGLFSLSGYRLDELAGENFVAGRLIYRRSLTNTEGSLFGIPLFVGGSLEAGEVWSNPDEFSLDDMRFGGSVYVGANTAL
GPVYLAFGRSEGGRQSAYLVIGRSF
>Mature_744_residues
TQTISRTPALRLTMQALAVLSLLTFAAIASAQDAPESQPGRPKVALVLSGGGALGLSHVGAIQELEAMGIRPDIVVGTSM
GAVIGGLYASGLSSAELEEVVNSANWSGVFNPAPQRDKLTFRQKQQQVDFPGTASLGVSGAGLLLPTGAISDQALMKELR
RVTPARMEVDNFDDLTIPFRAVATDIATGEAVVISAGELPMAMRASMSVPGVFPAFDLDGKLLVDGGLAANIPVSVAREM
GADIVIALWTPNELLQQEQIGSVVDVLSQTVSLLILANERAEIASMLPQDVLVRVNTGSISPAAFTRSKELIEAGRASIR
AEAEKFAPIAQGREPVSYAGIGDAPAPVISFVRIENASRLNQSLLEERMSSVLGKPADTSEINEALDRIYALGPFERVDY
TMTEQDGLTGLIVRAEDSRRNVGRLRLGMIVENDFNTESDVAVSLDYRSPALDAYGSELRAIATIGDINEFGVEYFRLLE
PEQSWFAVARAEVENRPVNIYTNRGFKTAGYDLTYGLLGIDAGRQFGNIAEVRVGTELGTGRAKLNEGAAPVEEVDIDSG
RIFASAGLDTLDNPFFPQTGLTAKARWTHGLESLGDNADYQTLSASGLHAFTMGRNTLLTSVSGGVRLSGAPPLDTLYRI
GGLFSLSGYRLDELAGENFVAGRLIYRRSLTNTEGSLFGIPLFVGGSLEAGEVWSNPDEFSLDDMRFGGSVYVGANTALG
PVYLAFGRSEGGRQSAYLVIGRSF

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI148727335, Length=208, Percent_Identity=33.1730769230769, Blast_Score=94, Evalue=6e-19,
Organism=Homo sapiens, GI148727290, Length=208, Percent_Identity=33.1730769230769, Blast_Score=94, Evalue=6e-19,
Organism=Escherichia coli, GI226510936, Length=327, Percent_Identity=27.5229357798165, Blast_Score=102, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 79243; Mature: 79111

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTISRTPALRLTMQALAVLSLLTFAAIASAQDAPESQPGRPKVALVLSGGGALGLSHV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHH
GAIQELEAMGIRPDIVVGTSMGAVIGGLYASGLSSAELEEVVNSANWSGVFNPAPQRDKL
HHHHHHHHCCCCCCEEECCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCH
TFRQKQQQVDFPGTASLGVSGAGLLLPTGAISDQALMKELRRVTPARMEVDNFDDLTIPF
HHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCH
RAVATDIATGEAVVISAGELPMAMRASMSVPGVFPAFDLDGKLLVDGGLAANIPVSVARE
HHHHHHHCCCCEEEEECCCCCHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHH
MGADIVIALWTPNELLQQEQIGSVVDVLSQTVSLLILANERAEIASMLPQDVLVRVNTGS
CCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHCCCCEEEEEECCC
ISPAAFTRSKELIEAGRASIRAEAEKFAPIAQGREPVSYAGIGDAPAPVISFVRIENASR
CCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCEECCCCCCCHHHHHEEEECCHHH
LNQSLLEERMSSVLGKPADTSEINEALDRIYALGPFERVDYTMTEQDGLTGLIVRAEDSR
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHCCEEEECCCCCEEEEEEECCCC
RNVGRLRLGMIVENDFNTESDVAVSLDYRSPALDAYGSELRAIATIGDINEFGVEYFRLL
CCCCEEEEEEEEECCCCCCCCEEEEEECCCCCHHHHCCHHEEEEEECCCHHHHHHHHHHC
EPEQSWFAVARAEVENRPVNIYTNRGFKTAGYDLTYGLLGIDAGRQFGNIAEVRVGTELG
CCCHHHHHHHHHHHCCCCEEEEECCCCEECCCEEEEEEEEECCCCCCCCEEEEEECCCCC
TGRAKLNEGAAPVEEVDIDSGRIFASAGLDTLDNPFFPQTGLTAKARWTHGLESLGDNAD
CCCHHCCCCCCCHHHEECCCCEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCC
YQTLSASGLHAFTMGRNTLLTSVSGGVRLSGAPPLDTLYRIGGLFSLSGYRLDELAGENF
CEEEECCCCEEEECCCCEEEEECCCCEEECCCCCHHHHHHHCCEEEECCCCHHHHCCCCC
VAGRLIYRRSLTNTEGSLFGIPLFVGGSLEAGEVWSNPDEFSLDDMRFGGSVYVGANTAL
HHHHEEEEHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEECCCEEEECCCCCC
GPVYLAFGRSEGGRQSAYLVIGRSF
CEEEEEECCCCCCCCEEEEEEEECC
>Mature Secondary Structure 
TQTISRTPALRLTMQALAVLSLLTFAAIASAQDAPESQPGRPKVALVLSGGGALGLSHV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHH
GAIQELEAMGIRPDIVVGTSMGAVIGGLYASGLSSAELEEVVNSANWSGVFNPAPQRDKL
HHHHHHHHCCCCCCEEECCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCH
TFRQKQQQVDFPGTASLGVSGAGLLLPTGAISDQALMKELRRVTPARMEVDNFDDLTIPF
HHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCH
RAVATDIATGEAVVISAGELPMAMRASMSVPGVFPAFDLDGKLLVDGGLAANIPVSVARE
HHHHHHHCCCCEEEEECCCCCHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHH
MGADIVIALWTPNELLQQEQIGSVVDVLSQTVSLLILANERAEIASMLPQDVLVRVNTGS
CCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHCCCCEEEEEECCC
ISPAAFTRSKELIEAGRASIRAEAEKFAPIAQGREPVSYAGIGDAPAPVISFVRIENASR
CCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCEECCCCCCCHHHHHEEEECCHHH
LNQSLLEERMSSVLGKPADTSEINEALDRIYALGPFERVDYTMTEQDGLTGLIVRAEDSR
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHCCEEEECCCCCEEEEEEECCCC
RNVGRLRLGMIVENDFNTESDVAVSLDYRSPALDAYGSELRAIATIGDINEFGVEYFRLL
CCCCEEEEEEEEECCCCCCCCEEEEEECCCCCHHHHCCHHEEEEEECCCHHHHHHHHHHC
EPEQSWFAVARAEVENRPVNIYTNRGFKTAGYDLTYGLLGIDAGRQFGNIAEVRVGTELG
CCCHHHHHHHHHHHCCCCEEEEECCCCEECCCEEEEEEEEECCCCCCCCEEEEEECCCCC
TGRAKLNEGAAPVEEVDIDSGRIFASAGLDTLDNPFFPQTGLTAKARWTHGLESLGDNAD
CCCHHCCCCCCCHHHEECCCCEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCC
YQTLSASGLHAFTMGRNTLLTSVSGGVRLSGAPPLDTLYRIGGLFSLSGYRLDELAGENF
CEEEECCCCEEEECCCCEEEEECCCCEEECCCCCHHHHHHHCCEEEECCCCHHHHCCCCC
VAGRLIYRRSLTNTEGSLFGIPLFVGGSLEAGEVWSNPDEFSLDDMRFGGSVYVGANTAL
HHHHEEEEHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEECCCEEEECCCCCC
GPVYLAFGRSEGGRQSAYLVIGRSF
CEEEEEECCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]