| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798512
Identifier: 114798512
GI number: 114798512
Start: 2365009
End: 2365740
Strand: Reverse
Name: 114798512
Synonym: HNE_2261
Alternate gene names: NA
Gene position: 2365740-2365009 (Counterclockwise)
Preceding gene: 114800481
Following gene: 114799243
Centisome position: 63.85
GC content: 64.48
Gene sequence:
>732_bases GTGACATCTGATAAAAACGGATCGCAGGACGGTCCGGCTCAGCCATTACTTTCCTTCCCTGTGCCAGTGGCGCATTGGGA CGGGCTGATTTCAGGTGGGCCGAATGAAGCGGCAGTAGGGCTGGCGAGCCGGCCGGAAGCCTGGGCGACGCATGCGCTGT GCGTGACCGGTCCGGCGCGGTGCGGATTGACCTATCTGGCGCGGGCCTGGGCCGGGCGATTTGGCGGGCAGTACATGACC GCGGCAGAGTTTGGCGCGCTGAAGCTCGGCGCGCTGGACGGGCTGGCGGGCGGATATGTGGCGCTTGACGATGTGGACAT GATTGCCGCCCGGCGCGATGAACCGCTGCTGCTTTTCTACAATATGATCGCCGCCAAGGGCGGGCGGGTGTTGCTGGTGG CCCATACCGGGCCTGCGGGCTGGCGGACGGGCATTGCGGACCTGCGCTCGCGCCTCAATTCGATGCCTGTGGCCGAAATC AGCCAACCGGACGAGGCGCATGTGCGGGCGCGGCTTCGGGCCGCAGCGGCTCAGCGTTTCATGAAACTGTCGCCGGAGAC GATCAATTACCTCGTGCCGCGCATTGACCTGTCGTATGAGGCGATTGAGACCCTTATGGACAGGCTCAGCGGGGAAGTGA GCATAGCCGGAAAGGCACCGGGGCTGGCATTGGCGCGCCTGGTGCTTGAGGGTTTGGATGAAGATCGCGAAGAAGACGAA GGCGCAGGCTGA
Upstream 100 bases:
>100_bases AAAACCGCCTGCGCAGTGATCTGGTTCAGCGCGGGGTGACCCTGAGCCAGGAAGAGGGCACGCTGACCCTTCGCTCGGCC GTCACAACGACTGGTATCCA
Downstream 100 bases:
>100_bases AAGCCGGGCGCCGGAGCAGGGGAAACCGATGCCGGACGGGCAACAGCAGCGTGCACTCAGACAACTCATGTCATCGCCGC AGCGATTTCTGAACCGGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: DNAA-Related Protein; ATPase-Like Protein Involved In DNA Replication Initiation; Chromosomal Replication Initiator
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MTSDKNGSQDGPAQPLLSFPVPVAHWDGLISGGPNEAAVGLASRPEAWATHALCVTGPARCGLTYLARAWAGRFGGQYMT AAEFGALKLGALDGLAGGYVALDDVDMIAARRDEPLLLFYNMIAAKGGRVLLVAHTGPAGWRTGIADLRSRLNSMPVAEI SQPDEAHVRARLRAAAAQRFMKLSPETINYLVPRIDLSYEAIETLMDRLSGEVSIAGKAPGLALARLVLEGLDEDREEDE GAG
Sequences:
>Translated_243_residues MTSDKNGSQDGPAQPLLSFPVPVAHWDGLISGGPNEAAVGLASRPEAWATHALCVTGPARCGLTYLARAWAGRFGGQYMT AAEFGALKLGALDGLAGGYVALDDVDMIAARRDEPLLLFYNMIAAKGGRVLLVAHTGPAGWRTGIADLRSRLNSMPVAEI SQPDEAHVRARLRAAAAQRFMKLSPETINYLVPRIDLSYEAIETLMDRLSGEVSIAGKAPGLALARLVLEGLDEDREEDE GAG >Mature_242_residues TSDKNGSQDGPAQPLLSFPVPVAHWDGLISGGPNEAAVGLASRPEAWATHALCVTGPARCGLTYLARAWAGRFGGQYMTA AEFGALKLGALDGLAGGYVALDDVDMIAARRDEPLLLFYNMIAAKGGRVLLVAHTGPAGWRTGIADLRSRLNSMPVAEIS QPDEAHVRARLRAAAAQRFMKLSPETINYLVPRIDLSYEAIETLMDRLSGEVSIAGKAPGLALARLVLEGLDEDREEDEG AG
Specific function: Unknown
COG id: COG0593
COG function: function code L; ATPase involved in DNA replication initiation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25736; Mature: 25604
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSDKNGSQDGPAQPLLSFPVPVAHWDGLISGGPNEAAVGLASRPEAWATHALCVTGPAR CCCCCCCCCCCCCCCHHHCCCCHHHHCCCCCCCCCHHEECCCCCCCHHHHEEEEECCCHH CGLTYLARAWAGRFGGQYMTAAEFGALKLGALDGLAGGYVALDDVDMIAARRDEPLLLFY HHHHHHHHHHHHHCCCCEEEHHHHCCEEECCCCCCCCCEEEECCHHHHHHCCCCCEEEEH NMIAAKGGRVLLVAHTGPAGWRTGIADLRSRLNSMPVAEISQPDEAHVRARLRAAAAQRF HHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHH MKLSPETINYLVPRIDLSYEAIETLMDRLSGEVSIAGKAPGLALARLVLEGLDEDREEDE HHCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCCCCCCC GAG CCC >Mature Secondary Structure TSDKNGSQDGPAQPLLSFPVPVAHWDGLISGGPNEAAVGLASRPEAWATHALCVTGPAR CCCCCCCCCCCCCCHHHCCCCHHHHCCCCCCCCCHHEECCCCCCCHHHHEEEEECCCHH CGLTYLARAWAGRFGGQYMTAAEFGALKLGALDGLAGGYVALDDVDMIAARRDEPLLLFY HHHHHHHHHHHHHCCCCEEEHHHHCCEEECCCCCCCCCEEEECCHHHHHHCCCCCEEEEH NMIAAKGGRVLLVAHTGPAGWRTGIADLRSRLNSMPVAEISQPDEAHVRARLRAAAAQRF HHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHH MKLSPETINYLVPRIDLSYEAIETLMDRLSGEVSIAGKAPGLALARLVLEGLDEDREEDE HHCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCCCCCCC GAG CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA