| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798496
Identifier: 114798496
GI number: 114798496
Start: 2551071
End: 2551907
Strand: Reverse
Name: 114798496
Synonym: HNE_2439
Alternate gene names: NA
Gene position: 2551907-2551071 (Counterclockwise)
Preceding gene: 114799144
Following gene: 114798900
Centisome position: 68.88
GC content: 58.42
Gene sequence:
>837_bases ATGAAACAGTCCCCTGAAGATGTAACGATCATTCCCCGCGACATTCGTTTTGATGTCTCCGGCGCCCAGCAGGAACACTG GATGGACGGCGACCCGGTCGCCACTGCCGTCATGAATACGCTCTCGCTGACCTTCCCGGATGGCGAGCGCCTCTTCATCG ATGCCGTGCGCGCCTACAAGGACCAGGTCAGCGGCAAGGTCGCCCAGGACGTAAAAGACTTCATCGCCCAGGAAGCAATC CACGCCCGCGAGCATCATCTCCTCAACAAGGTCATCAACCGGGACAAATACCCTGTCGAGCGCATCGAAGGGATGATCCG GGAGCGGATCGCCTTCTCGCGCGCCGGTGGCCCGATGCGCATGCTGATCGCCACGATCTGCCTTGAGCATTTCACCGCCA TGCTGGCCGATATGCGCGCCCTGCATCAGGACATGTTCAGCAAGACCGATCCCGGCATCGAGCGCATGTGGCGCTGGCAC GCTATGGAAGAAACCGAGCATAAGGCCGTCACCTATGACGTCTTCATGGAAGTCACAAAAGACTGGTCGCCATGGAAGCG CTATGTCCGCCGCTGCGTCGCCATGGCCCTCATAAGCTACTATTTCACCCGCAACATCGCGACCTATTCGGGCTGGATGC TGGAAGCAGATGGCTACACGCCGGATGAGGCCGAGAAAGCCGTCAAAAACTTCCTCTGGAAAAAACCCGGCTTCTTCGCG CGCGGCTGGAAAATCTGGATCAGCTGGTTCAAGCCCGGTTTTCACCCTTGGGATCACGACAATCGCGCCCTCATGGCCGA GTGGAAATCGGAATTTGATCTCGTCGCTGCCGAATAG
Upstream 100 bases:
>100_bases TTTCTCTATCGACATTTTTGTCAGTAGCGCCTATATATCAGCAAATAGGCAGCCTTAAAGGCTCTGCCCGCTCCTTGTAA GCCGGATTTGCGAGATGGCC
Downstream 100 bases:
>100_bases GTGCGGACCGCCCGCGTGACGTCAGGAACAATTTGCGTATACCCTTGAGGCACAATCCTCAGGAGTTTCCCGCATGACCC GTATCCTCGGCCTCTCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Metal-Dependent Hydrolase-Like Protein; FF Domain-Containing Protein; Conserved Protein UCP; FF Domain Protein; Phthalate 4 5-Dioxygenase; Metal-Dependent Hydrolase-Like; Metal Hydrolase
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MKQSPEDVTIIPRDIRFDVSGAQQEHWMDGDPVATAVMNTLSLTFPDGERLFIDAVRAYKDQVSGKVAQDVKDFIAQEAI HAREHHLLNKVINRDKYPVERIEGMIRERIAFSRAGGPMRMLIATICLEHFTAMLADMRALHQDMFSKTDPGIERMWRWH AMEETEHKAVTYDVFMEVTKDWSPWKRYVRRCVAMALISYYFTRNIATYSGWMLEADGYTPDEAEKAVKNFLWKKPGFFA RGWKIWISWFKPGFHPWDHDNRALMAEWKSEFDLVAAE
Sequences:
>Translated_278_residues MKQSPEDVTIIPRDIRFDVSGAQQEHWMDGDPVATAVMNTLSLTFPDGERLFIDAVRAYKDQVSGKVAQDVKDFIAQEAI HAREHHLLNKVINRDKYPVERIEGMIRERIAFSRAGGPMRMLIATICLEHFTAMLADMRALHQDMFSKTDPGIERMWRWH AMEETEHKAVTYDVFMEVTKDWSPWKRYVRRCVAMALISYYFTRNIATYSGWMLEADGYTPDEAEKAVKNFLWKKPGFFA RGWKIWISWFKPGFHPWDHDNRALMAEWKSEFDLVAAE >Mature_278_residues MKQSPEDVTIIPRDIRFDVSGAQQEHWMDGDPVATAVMNTLSLTFPDGERLFIDAVRAYKDQVSGKVAQDVKDFIAQEAI HAREHHLLNKVINRDKYPVERIEGMIRERIAFSRAGGPMRMLIATICLEHFTAMLADMRALHQDMFSKTDPGIERMWRWH AMEETEHKAVTYDVFMEVTKDWSPWKRYVRRCVAMALISYYFTRNIATYSGWMLEADGYTPDEAEKAVKNFLWKKPGFFA RGWKIWISWFKPGFHPWDHDNRALMAEWKSEFDLVAAE
Specific function: Unknown
COG id: COG3687
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32558; Mature: 32558
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQSPEDVTIIPRDIRFDVSGAQQEHWMDGDPVATAVMNTLSLTFPDGERLFIDAVRAYK CCCCCCCEEEECCCEEECCCCCCHHHCCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHH DQVSGKVAQDVKDFIAQEAIHAREHHLLNKVINRDKYPVERIEGMIRERIAFSRAGGPMR HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHH MLIATICLEHFTAMLADMRALHQDMFSKTDPGIERMWRWHAMEETEHKAVTYDVFMEVTK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHCCHHHHHHHHHHHHC DWSPWKRYVRRCVAMALISYYFTRNIATYSGWMLEADGYTPDEAEKAVKNFLWKKPGFFA CCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCEEEEECCCCCHHHHHHHHHHHHCCCCCCH RGWKIWISWFKPGFHPWDHDNRALMAEWKSEFDLVAAE HHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCEEECC >Mature Secondary Structure MKQSPEDVTIIPRDIRFDVSGAQQEHWMDGDPVATAVMNTLSLTFPDGERLFIDAVRAYK CCCCCCCEEEECCCEEECCCCCCHHHCCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHH DQVSGKVAQDVKDFIAQEAIHAREHHLLNKVINRDKYPVERIEGMIRERIAFSRAGGPMR HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHH MLIATICLEHFTAMLADMRALHQDMFSKTDPGIERMWRWHAMEETEHKAVTYDVFMEVTK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHCCHHHHHHHHHHHHC DWSPWKRYVRRCVAMALISYYFTRNIATYSGWMLEADGYTPDEAEKAVKNFLWKKPGFFA CCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCEEEEECCCCCHHHHHHHHHHHHCCCCCCH RGWKIWISWFKPGFHPWDHDNRALMAEWKSEFDLVAAE HHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA