| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is slyA [C]
Identifier: 114798495
GI number: 114798495
Start: 3207909
End: 3208892
Strand: Direct
Name: slyA [C]
Synonym: HNE_3038
Alternate gene names: 114798495
Gene position: 3207909-3208892 (Clockwise)
Preceding gene: 114800086
Following gene: 114799704
Centisome position: 86.58
GC content: 63.01
Gene sequence:
>984_bases ATGACCAGAGATGTTCTCGCAGAGATGGGCTATCTCGCCCTCGGCAGCCGGATGAAGCGCCTTGCCGAGCGTATGCAGGC GGACGCCACAAAGGTGTTTGCCGATCGCGGCCTTCCCATCCAGGGCACACATTTCCCGCTGCTGGCAGCCCTCACGACCT ATGGCCCGCTCAGCGTCACCGAAGCTGTCGAGGCCGTTGGCATCAGCCAACCTGCGGTCACCCGCATTCACAACGCCCTG CAGAAACTCGGCATCACCACGACCAGCCGCGTGAAGGGCGATAACCGCCAGAAGCTGATCCGCCTCACCGCGAAAGGCGA AGCTCTGCTGGAGGAGCTGAAGGCCGATCTCTGGCCGCAGGTGCGCCGCGCCGCGCAAGGCCTCTGTGAAGGCGAGGAGA CAGACTTCCTCTCCTGGATCGCCCGCCTGGAAGGCGCGCTTCAGGACCTCTCCCTGCACGACCGCATACGGAGCGAAGGA GCCAGCCGCCACCCGGCCCTGCGGCTGGTCGAGTTTGACGACCGCCTCGCGCCGGAGTTTGACGCCATCACCCGCGAATG GGTGGAAGCCATGTTCACGCTGGAAAAGAAGGACATCGAGATCATCGAAAACCCGCGCGAGAAAATCCTCGCGCCGGGCG GAGAGATCCTGTTCGTGGAGGCAGACGGGCTCGGCATCATCGGCACCTGCGCGCTGATGCAGGTGGAAGGAAATGTCTTT GAATTGACCAAGATGGGCGTGCGCGAAACAGCCCGCGGCCTGAAGGCCGGCGAGTTTCTGCTTCAGCGGACATTGGAGCG CGCCCGGCAGATGCCCATCGGGGAACTCTTCCTGCTGACCAACTCCAAATGCGCCGCCGCCATCCACCTCTATGAAAAGG CCGGCTTCATGCATGACGCAGACATTATGGCGCGTTACGGCGCCAGCTATGCCCGCTGCAATGTGGCGATGTCCTATGAT CTCTCGAAGCCGCCCCGGATCTGA
Upstream 100 bases:
>100_bases CACCCCTGAAACGCGCCGCGCCCAATCCCGCGCCTGCCCGCCCGCTTGACACAGCAGATATATAACATGTTATATATCTG CTGATATTGGAGCGCCACGC
Downstream 100 bases:
>100_bases TCCGGCGCGGCTTCAAAGGGAAGATCAACCCGTCTCGCGGTCGCCGCGCACTTCCAGGTCGTATTCACGCACCTTGCGGT AAAGCGTCGAGCGGCCAATC
Product: transcriptional regulator, MarR family/acetyltransferase, GNAT family protein
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; Acetyltransferase; Gcn5-Related N-Acetyltransferase; Transcriptional Regulator MarR Family; GNAT Family Acetyltransferase; Transcriptional Regulator; Acetyltransferase Family Protein; GCN5-Like N-Acetyltransferase; Transcriptional Regulator MarR Family Protein; Acetyltransferase Family
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MTRDVLAEMGYLALGSRMKRLAERMQADATKVFADRGLPIQGTHFPLLAALTTYGPLSVTEAVEAVGISQPAVTRIHNAL QKLGITTTSRVKGDNRQKLIRLTAKGEALLEELKADLWPQVRRAAQGLCEGEETDFLSWIARLEGALQDLSLHDRIRSEG ASRHPALRLVEFDDRLAPEFDAITREWVEAMFTLEKKDIEIIENPREKILAPGGEILFVEADGLGIIGTCALMQVEGNVF ELTKMGVRETARGLKAGEFLLQRTLERARQMPIGELFLLTNSKCAAAIHLYEKAGFMHDADIMARYGASYARCNVAMSYD LSKPPRI
Sequences:
>Translated_327_residues MTRDVLAEMGYLALGSRMKRLAERMQADATKVFADRGLPIQGTHFPLLAALTTYGPLSVTEAVEAVGISQPAVTRIHNAL QKLGITTTSRVKGDNRQKLIRLTAKGEALLEELKADLWPQVRRAAQGLCEGEETDFLSWIARLEGALQDLSLHDRIRSEG ASRHPALRLVEFDDRLAPEFDAITREWVEAMFTLEKKDIEIIENPREKILAPGGEILFVEADGLGIIGTCALMQVEGNVF ELTKMGVRETARGLKAGEFLLQRTLERARQMPIGELFLLTNSKCAAAIHLYEKAGFMHDADIMARYGASYARCNVAMSYD LSKPPRI >Mature_326_residues TRDVLAEMGYLALGSRMKRLAERMQADATKVFADRGLPIQGTHFPLLAALTTYGPLSVTEAVEAVGISQPAVTRIHNALQ KLGITTTSRVKGDNRQKLIRLTAKGEALLEELKADLWPQVRRAAQGLCEGEETDFLSWIARLEGALQDLSLHDRIRSEGA SRHPALRLVEFDDRLAPEFDAITREWVEAMFTLEKKDIEIIENPREKILAPGGEILFVEADGLGIIGTCALMQVEGNVFE LTKMGVRETARGLKAGEFLLQRTLERARQMPIGELFLLTNSKCAAAIHLYEKAGFMHDADIMARYGASYARCNVAMSYDL SKPPRI
Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36279; Mature: 36148
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRDVLAEMGYLALGSRMKRLAERMQADATKVFADRGLPIQGTHFPLLAALTTYGPLSVT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHH EAVEAVGISQPAVTRIHNALQKLGITTTSRVKGDNRQKLIRLTAKGEALLEELKADLWPQ HHHHHHCCCCHHHHHHHHHHHHHCCCCHHHCCCCCHHHEEEEECCHHHHHHHHHHHHCHH VRRAAQGLCEGEETDFLSWIARLEGALQDLSLHDRIRSEGASRHPALRLVEFDDRLAPEF HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHH DAITREWVEAMFTLEKKDIEIIENPREKILAPGGEILFVEADGLGIIGTCALMQVEGNVF HHHHHHHHHHHHHHHHCCHHHHCCCHHHHCCCCCCEEEEECCCCCEEHHHEEEEECCCCH ELTKMGVRETARGLKAGEFLLQRTLERARQMPIGELFLLTNSKCAAAIHLYEKAGFMHDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCH DIMARYGASYARCNVAMSYDLSKPPRI HHHHHHCCCHHEEEEEEEECCCCCCCC >Mature Secondary Structure TRDVLAEMGYLALGSRMKRLAERMQADATKVFADRGLPIQGTHFPLLAALTTYGPLSVT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHH EAVEAVGISQPAVTRIHNALQKLGITTTSRVKGDNRQKLIRLTAKGEALLEELKADLWPQ HHHHHHCCCCHHHHHHHHHHHHHCCCCHHHCCCCCHHHEEEEECCHHHHHHHHHHHHCHH VRRAAQGLCEGEETDFLSWIARLEGALQDLSLHDRIRSEGASRHPALRLVEFDDRLAPEF HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHH DAITREWVEAMFTLEKKDIEIIENPREKILAPGGEILFVEADGLGIIGTCALMQVEGNVF HHHHHHHHHHHHHHHHCCHHHHCCCHHHHCCCCCCEEEEECCCCCEEHHHEEEEECCCCH ELTKMGVRETARGLKAGEFLLQRTLERARQMPIGELFLLTNSKCAAAIHLYEKAGFMHDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCH DIMARYGASYARCNVAMSYDLSKPPRI HHHHHHCCCHHEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA