| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798443
Identifier: 114798443
GI number: 114798443
Start: 2664788
End: 2665861
Strand: Reverse
Name: 114798443
Synonym: HNE_2524
Alternate gene names: NA
Gene position: 2665861-2664788 (Counterclockwise)
Preceding gene: 114798171
Following gene: 114799527
Centisome position: 71.95
GC content: 52.05
Gene sequence:
>1074_bases ATGAGGACAAGTGTGCGGAATATTTTAGCATTTCGAATGCTGTACGCTTCGATTTCACTTTCGGCCGTTGCTGAAGTCGC TGCGGCGCAAACGGTCACCTACACTTACGACGCGCTCGGTAGATTGACGGGCGCCGACTATCCGGCTGGCGCCTCCACCA AATATGTCTACGATGCTGCCGGCAACCGGACTTCTGTTGTATCGATTCAATCGCCTATTGCGGTCAATGACGCGATCTCA ACCAATTCGAACACGTCAAAATCGTTCGATCCCCGCATCAATGACAGCGATCCACAAGGCGGCGCGCTGACGATAGTTTC GGTTGACGGGCCGCCGGTTGGTTCTGCCATAATTACCGGTGGCGGTACGGGAATCACCTACGCGCCACCGATTGGTTCGA TTGGATTGGCAACATTTGATTATACCATTCGGAATCCTCAGAATGCGACCGCTACGGCGAGAGTAACCGTCACGATCCTG AACCAAGGACCAGTTGCTGTTGCCGATAGTGTGACCACCGCATACAATACGCCGGTCACTTTCAATCCCCTCTCCAACGA CTATGATCGCGAAGGCGATGATAAAACGCTTGTTTCGGTTTCGACCCCATCAAGCGGTTCGACGTCGTTCAACCCGGCGG GCCCAAGTATTACCTACACGCCTGCTAATGGGTTTTCGGGGGCGGCGACTTTCACATATGTCGTCGCAGATCACGAGGGG GCTGCTGGAACCGGGACCGTAACAGTGGCCGTCTCGCCTCAGGCGAATAGTCCGCCCGTTGCCAATAATGATATCCTCTA TTTTATGCTGGACAATCCAGGCAATACCCACTTCTACGGAGAAATTTATGGGTGGAGGCAGAATGATTACGACCCAGATG CGGGTGATGTCATTTTTCTGGATAGTATCAGCGGAAACTCAAATTTTTACATACTTACATCACCGTCTGGCGGTAAGACG CTTAGGTATTCGGGTGCAATCGGATCTGGTCACCAGTCTGTTAATTACACAATTGCCGATTCATCTGGCGCTACAGACAG CGCCAGGATCGATGTTTATTTCTACGCAGACTGA
Upstream 100 bases:
>100_bases CAGATAATATCCTCGCGTTTTTGAGATTGTCACGAGGTTCAGGACGTGTACCGCTTATTAGGTGGGATGCAGGGAAAAAT GGCGTGATGGGCGGGGCGGG
Downstream 100 bases:
>100_bases GAGCAGAGGCTGGACATGAAGCTACTTTTCCTGGCGGGCCTACTGTTAGGTATCGCAGTCCTAGACTCAAATGCTCAGGA CGCAGATCAAATATCGAAAG
Product: RHS/YD repeat-containing protein
Products: NA
Alternate protein names: Proprotein Convertase P; Outer Membrane Adhesin Like Protein; Hyalin Domain-Containing Protein; Fibronectin Type III Domain-Containing Protein; Vcbs Repeat Domain Protein; Hemagglutinin/Hemolysin-Related Protein; Copper Amine Oxidase Domain Protein; Type I Secretion Target Repeat Protein; RHS/YD Repeat-Containing Protein
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MRTSVRNILAFRMLYASISLSAVAEVAAAQTVTYTYDALGRLTGADYPAGASTKYVYDAAGNRTSVVSIQSPIAVNDAIS TNSNTSKSFDPRINDSDPQGGALTIVSVDGPPVGSAIITGGGTGITYAPPIGSIGLATFDYTIRNPQNATATARVTVTIL NQGPVAVADSVTTAYNTPVTFNPLSNDYDREGDDKTLVSVSTPSSGSTSFNPAGPSITYTPANGFSGAATFTYVVADHEG AAGTGTVTVAVSPQANSPPVANNDILYFMLDNPGNTHFYGEIYGWRQNDYDPDAGDVIFLDSISGNSNFYILTSPSGGKT LRYSGAIGSGHQSVNYTIADSSGATDSARIDVYFYAD
Sequences:
>Translated_357_residues MRTSVRNILAFRMLYASISLSAVAEVAAAQTVTYTYDALGRLTGADYPAGASTKYVYDAAGNRTSVVSIQSPIAVNDAIS TNSNTSKSFDPRINDSDPQGGALTIVSVDGPPVGSAIITGGGTGITYAPPIGSIGLATFDYTIRNPQNATATARVTVTIL NQGPVAVADSVTTAYNTPVTFNPLSNDYDREGDDKTLVSVSTPSSGSTSFNPAGPSITYTPANGFSGAATFTYVVADHEG AAGTGTVTVAVSPQANSPPVANNDILYFMLDNPGNTHFYGEIYGWRQNDYDPDAGDVIFLDSISGNSNFYILTSPSGGKT LRYSGAIGSGHQSVNYTIADSSGATDSARIDVYFYAD >Mature_357_residues MRTSVRNILAFRMLYASISLSAVAEVAAAQTVTYTYDALGRLTGADYPAGASTKYVYDAAGNRTSVVSIQSPIAVNDAIS TNSNTSKSFDPRINDSDPQGGALTIVSVDGPPVGSAIITGGGTGITYAPPIGSIGLATFDYTIRNPQNATATARVTVTIL NQGPVAVADSVTTAYNTPVTFNPLSNDYDREGDDKTLVSVSTPSSGSTSFNPAGPSITYTPANGFSGAATFTYVVADHEG AAGTGTVTVAVSPQANSPPVANNDILYFMLDNPGNTHFYGEIYGWRQNDYDPDAGDVIFLDSISGNSNFYILTSPSGGKT LRYSGAIGSGHQSVNYTIADSSGATDSARIDVYFYAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37052; Mature: 37052
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTSVRNILAFRMLYASISLSAVAEVAAAQTVTYTYDALGRLTGADYPAGASTKYVYDAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHCCCCCCCCCCCEEEEECC GNRTSVVSIQSPIAVNDAISTNSNTSKSFDPRINDSDPQGGALTIVSVDGPPVGSAIITG CCEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEC GGTGITYAPPIGSIGLATFDYTIRNPQNATATARVTVTILNQGPVAVADSVTTAYNTPVT CCCCEEECCCCCCCEEEEEEEEEECCCCCCEEEEEEEEEECCCCEEEECCEEEEECCCEE FNPLSNDYDREGDDKTLVSVSTPSSGSTSFNPAGPSITYTPANGFSGAATFTYVVADHEG ECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEECCC AAGTGTVTVAVSPQANSPPVANNDILYFMLDNPGNTHFYGEIYGWRQNDYDPDAGDVIFL CCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCEEEE DSISGNSNFYILTSPSGGKTLRYSGAIGSGHQSVNYTIADSSGATDSARIDVYFYAD EECCCCCCEEEEECCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEC >Mature Secondary Structure MRTSVRNILAFRMLYASISLSAVAEVAAAQTVTYTYDALGRLTGADYPAGASTKYVYDAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHCCCCCCCCCCCEEEEECC GNRTSVVSIQSPIAVNDAISTNSNTSKSFDPRINDSDPQGGALTIVSVDGPPVGSAIITG CCEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEC GGTGITYAPPIGSIGLATFDYTIRNPQNATATARVTVTILNQGPVAVADSVTTAYNTPVT CCCCEEECCCCCCCEEEEEEEEEECCCCCCEEEEEEEEEECCCCEEEECCEEEEECCCEE FNPLSNDYDREGDDKTLVSVSTPSSGSTSFNPAGPSITYTPANGFSGAATFTYVVADHEG ECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEECCC AAGTGTVTVAVSPQANSPPVANNDILYFMLDNPGNTHFYGEIYGWRQNDYDPDAGDVIFL CCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCEEEE DSISGNSNFYILTSPSGGKTLRYSGAIGSGHQSVNYTIADSSGATDSARIDVYFYAD EECCCCCCEEEEECCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA