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The map label for this gene is 114798434

Identifier: 114798434

GI number: 114798434

Start: 2613435

End: 2613953

Strand: Reverse

Name: 114798434

Synonym: HNE_2485

Alternate gene names: NA

Gene position: 2613953-2613435 (Counterclockwise)

Preceding gene: 114800123

Following gene: 114800492

Centisome position: 70.55

GC content: 60.89

Gene sequence:

>519_bases
ATGACAATAATTCTCGATCCGACCGATGAGCGAAAGCCCGTCTCGCGTCAGGTCACGGCGCGCGCCGGAAGCTTGAGCGG
CACGGTTGGCCTGCTCGACATCCGCAAGCCCCGCGGCAACGTCCTGCTCGACGAACTCGAGCGGCAGCTGAAGGCGGCCG
CGCCAGCGATCACCGTGAAGCGCTTCGCCAAGCCCACTTTCACCAAGCCATGCCCCGATGACCTGCGTCGCGACATCGCT
GGCCAGGTCGACTATCTGGTCGAAGCGCTGGCTGATTGAGGTTCCTGTACGACGTGCAGTCTGCACGACACAGTCTGGTT
TGAAATCCAGGGAATCCCATCGGTCTCCATCGCTTCATCAGAGTTCGAAGAAGCTGCCAATTTCCAGCGGAGCGCGCTCG
GTATGCCGGACGCCCGGTATGTTCTTGTGCCGCATCCTATCCAGGATGCGACAGACGATGAGATGCGGGCCAAGGCGAAG
CAGGCGCTATCGGCTATTATCGACGCTTTGACGCGGTGA

Upstream 100 bases:

>100_bases
AAATCGGGTCTCAGTCGGTCTCGCGCAAGATCGATTTGGGGTAGAGCGGGAGGCGCGAACATGTATGATTGTACCGACGT
TCGCAGAAGAAGGGTGAAAG

Downstream 100 bases:

>100_bases
TCGCAAATATGTTGCGGTAGAACAGCTCGAGCTTTGAAGGTCCTCGGGGCGCGGGCTGTGCTTGCGAGGGCGCCTGCGGC
GTGCTGAACTTCTATCGACC

Product: selenoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MTIILDPTDERKPVSRQVTARAGSLSGTVGLLDIRKPRGNVLLDELERQLKAAAPAITVKRFAKPTFTKPCPDDLRRDIA
GQVDYLVEALADUGSCTTCSLHDTVWFEIQGIPSVSIASSEFEEAANFQRSALGMPDARYVLVPHPIQDATDDEMRAKAK
QALSAIIDALTR

Sequences:

>Translated_172_residues
MTIILDPTDERKPVSRQVTARAGSLSGTVGLLDIRKPRGNVLLDELERQLKAAAPAITVKRFAKPTFTKPCPDDLRRDIA
GQVDYLVEALAD*GSCTTCSLHDTVWFEIQGIPSVSIASSEFEEAANFQRSALGMPDARYVLVPHPIQDATDDEMRAKAK
QALSAIIDALTR
>Mature_171_residues
TIILDPTDERKPVSRQVTARAGSLSGTVGLLDIRKPRGNVLLDELERQLKAAAPAITVKRFAKPTFTKPCPDDLRRDIAG
QVDYLVEALAD*GSCTTCSLHDTVWFEIQGIPSVSIASSEFEEAANFQRSALGMPDARYVLVPHPIQDATDDEMRAKAKQ
ALSAIIDALTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18629; Mature: 18498

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIILDPTDERKPVSRQVTARAGSLSGTVGLLDIRKPRGNVLLDELERQLKAAAPAITVK
CEEEECCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCHHHHH
RFAKPTFTKPCPDDLRRDIAGQVDYLVEALADGSCTTCSLHDTVWFEIQGIPSVSIASSE
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEEECCCCCCHHHHH
FEEAANFQRSALGMPDARYVLVPHPIQDATDDEMRAKAKQALSAIIDALTR
HHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TIILDPTDERKPVSRQVTARAGSLSGTVGLLDIRKPRGNVLLDELERQLKAAAPAITVK
EEEECCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCHHHHH
RFAKPTFTKPCPDDLRRDIAGQVDYLVEALADGSCTTCSLHDTVWFEIQGIPSVSIASSE
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEEECCCCCCHHHHH
FEEAANFQRSALGMPDARYVLVPHPIQDATDDEMRAKAKQALSAIIDALTR
HHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA