| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798432
Identifier: 114798432
GI number: 114798432
Start: 1518165
End: 1519211
Strand: Reverse
Name: 114798432
Synonym: HNE_1489
Alternate gene names: NA
Gene position: 1519211-1518165 (Counterclockwise)
Preceding gene: 114799249
Following gene: 114799673
Centisome position: 41.0
GC content: 59.41
Gene sequence:
>1047_bases ATGGCTTTTCAGGAACTCCCCCTTATCATCCAGACCAGCTACGTAGAGCTCCTTGACCAGCTCCGCCTGGCGTCCACGTC GGCATTCGCCGAGGGCTCAACATTCCGAAAGCGTAGCATCTCCGGAAAAGAATACTGGTACGTTCAGGAGCCAACGACAC CCCAGGGACGTCCCCCGGAGCGCTATCTGGGTCTCGACACCCCCGAGCGCCGGGCAACAATTGAGGTGGGACAGACCGCC AAAGCCAATGCCAACGCCCGGAAAATCATTCGCCGGTCCCTGGCTGGTGGCGGTCTCCCCGAACCCGACCCCCTGACAGG CGCCGTCATTGAAGCCTTCGCAGAGGCTGGCGTATTTCGTTTGAGGGGCGTCCTTGTGGGAACCATCGCTTTCCAGACCT ATGCCGGACACCTTGGTATACGGCTACCGGGCGCTGCGATCCGGACGGGGGATCTGGATCTCGCTCAGGACTATGGCGTT TCTCTTGCCATCAATGATACGCTGGACAGATCCCTGATTGATATCCTCAGATCGGTGGACCCGGCTTTCGCACCCGTTCC AACCCTGGCCGGACCCAATATCGCAACGACTTATGCCCGGCCCGGCGGTTACCGTGTCGACGTCCTGACGACGAACCGCG GCGCCGAGCGCGACGCGCCTGTCAGACTTCCGAGCCTGCAATCTGACGCCATTCCCCTTCGTTTTCTTGACTATCTCCTC AGAGACACGGTTGAAGCCGCCGTGCTGACAAAGTACGGCGCGATTGTGAACGTCCCTTCTCCGGAACGCTACGCCGCACA CAAACTGATTGTTTCGTCATTGCGGCATGAGTCCGGAGAAAGCGCCGTAAAATCCGACAAGGATGTTCTGCAGGCCGGTT TGATAATTGAAGCCCTCATGGCCAAGCGGCGACTTGAAGAACTGACCGACGCCCTCCTCGAAGCCGCCGGTCGCGGCGCC TCATGGCGGGCAAGGCTTGTAAAGGCTGCAACCCGCCTGACGGATACCCCAAGGGCAATCATTCAAACTGTTTTGAAAGC GCCGTAA
Upstream 100 bases:
>100_bases TGCAGGTATGAAGGGTCAGCGGCGCACCGTAGCTGATATTGTGCTCTGACTGCTGAGAGTAAAGGTACAGCCCGCCGCGC CACTTGCCATTTGCCGGCAA
Downstream 100 bases:
>100_bases GTGGTCGCGCCAAAGGCGTTACCGGCCCGAGGCCCGCACGGTCGCCAGCATGATTTCAGACTCGATATCTTCGCCTCCCG CTTCCTGGCAGGTCTCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MAFQELPLIIQTSYVELLDQLRLASTSAFAEGSTFRKRSISGKEYWYVQEPTTPQGRPPERYLGLDTPERRATIEVGQTA KANANARKIIRRSLAGGGLPEPDPLTGAVIEAFAEAGVFRLRGVLVGTIAFQTYAGHLGIRLPGAAIRTGDLDLAQDYGV SLAINDTLDRSLIDILRSVDPAFAPVPTLAGPNIATTYARPGGYRVDVLTTNRGAERDAPVRLPSLQSDAIPLRFLDYLL RDTVEAAVLTKYGAIVNVPSPERYAAHKLIVSSLRHESGESAVKSDKDVLQAGLIIEALMAKRRLEELTDALLEAAGRGA SWRARLVKAATRLTDTPRAIIQTVLKAP
Sequences:
>Translated_348_residues MAFQELPLIIQTSYVELLDQLRLASTSAFAEGSTFRKRSISGKEYWYVQEPTTPQGRPPERYLGLDTPERRATIEVGQTA KANANARKIIRRSLAGGGLPEPDPLTGAVIEAFAEAGVFRLRGVLVGTIAFQTYAGHLGIRLPGAAIRTGDLDLAQDYGV SLAINDTLDRSLIDILRSVDPAFAPVPTLAGPNIATTYARPGGYRVDVLTTNRGAERDAPVRLPSLQSDAIPLRFLDYLL RDTVEAAVLTKYGAIVNVPSPERYAAHKLIVSSLRHESGESAVKSDKDVLQAGLIIEALMAKRRLEELTDALLEAAGRGA SWRARLVKAATRLTDTPRAIIQTVLKAP >Mature_347_residues AFQELPLIIQTSYVELLDQLRLASTSAFAEGSTFRKRSISGKEYWYVQEPTTPQGRPPERYLGLDTPERRATIEVGQTAK ANANARKIIRRSLAGGGLPEPDPLTGAVIEAFAEAGVFRLRGVLVGTIAFQTYAGHLGIRLPGAAIRTGDLDLAQDYGVS LAINDTLDRSLIDILRSVDPAFAPVPTLAGPNIATTYARPGGYRVDVLTTNRGAERDAPVRLPSLQSDAIPLRFLDYLLR DTVEAAVLTKYGAIVNVPSPERYAAHKLIVSSLRHESGESAVKSDKDVLQAGLIIEALMAKRRLEELTDALLEAAGRGAS WRARLVKAATRLTDTPRAIIQTVLKAP
Specific function: Unknown
COG id: COG5397
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37690; Mature: 37558
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFQELPLIIQTSYVELLDQLRLASTSAFAEGSTFRKRSISGKEYWYVQEPTTPQGRPPE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEECCCCCCCCCCH RYLGLDTPERRATIEVGQTAKANANARKIIRRSLAGGGLPEPDPLTGAVIEAFAEAGVFR HHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH LRGVLVGTIAFQTYAGHLGIRLPGAAIRTGDLDLAQDYGVSLAINDTLDRSLIDILRSVD HHHHHHHHHHHHHHHCCCCEECCCCEEECCCCCHHHHCCCEEEECCHHHHHHHHHHHHCC PAFAPVPTLAGPNIATTYARPGGYRVDVLTTNRGAERDAPVRLPSLQSDAIPLRFLDYLL CCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCEECCCCCCCCCHHHHHHHHH RDTVEAAVLTKYGAIVNVPSPERYAAHKLIVSSLRHESGESAVKSDKDVLQAGLIIEALM HHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH AKRRLEELTDALLEAAGRGASWRARLVKAATRLTDTPRAIIQTVLKAP HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCC >Mature Secondary Structure AFQELPLIIQTSYVELLDQLRLASTSAFAEGSTFRKRSISGKEYWYVQEPTTPQGRPPE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEECCCCCCCCCCH RYLGLDTPERRATIEVGQTAKANANARKIIRRSLAGGGLPEPDPLTGAVIEAFAEAGVFR HHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH LRGVLVGTIAFQTYAGHLGIRLPGAAIRTGDLDLAQDYGVSLAINDTLDRSLIDILRSVD HHHHHHHHHHHHHHHCCCCEECCCCEEECCCCCHHHHCCCEEEECCHHHHHHHHHHHHCC PAFAPVPTLAGPNIATTYARPGGYRVDVLTTNRGAERDAPVRLPSLQSDAIPLRFLDYLL CCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCEECCCCCCCCCHHHHHHHHH RDTVEAAVLTKYGAIVNVPSPERYAAHKLIVSSLRHESGESAVKSDKDVLQAGLIIEALM HHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH AKRRLEELTDALLEAAGRGASWRARLVKAATRLTDTPRAIIQTVLKAP HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA