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The map label for this gene is yoqW [H]

Identifier: 114798387

GI number: 114798387

Start: 1405589

End: 1406263

Strand: Direct

Name: yoqW [H]

Synonym: HNE_1375

Alternate gene names: 114798387

Gene position: 1405589-1406263 (Clockwise)

Preceding gene: 114797614

Following gene: 114800217

Centisome position: 37.94

GC content: 62.07

Gene sequence:

>675_bases
ATGTGCGGACGATTTTTCCGGGAAGGCGTGACCTGGGGCGAGTATTATACCTGGCTCAACATCATGGAAATTCAGGGTGT
GGAGCCGCCCGAAGCCCACTGGAATGTTGCGCCGACGACGATCCAGCCGATCATTCGCCTGAACCATGACAAGTCTGCGC
GCGAGATGGCGCCCGCCCGGTGGGGGCTGGTGCCGAGCTGGTGGACCAAGCCGCTTAAAGAGTGGCGGGCCCTTTCGATC
AATGCGCGGGCTGAAGAGGTGGCGGAGAAGCCGACCTTTCGCGGTGCTTACCGGCACAAGCGCTGCCTGGTGCCGGTGTC
GGGCTATTATGAATGGTCGGTGCAGGGGAAGAGTAAGACGCCGTTTGCGTTCCGCCTGCGCAACCGGCGGCTGTTCTGCC
TGGCGGGTCTCTGGGACGCGGCGCTGATCGATGGCTCGGAAATCCAGAGCTTCACGATCCTCACTACCAAGCCCAATGAC
TTCACGGCTGGCATTCATGACCGGATGCCGGTGATCCTGCGGCCGGAAGATTATGACCGGTGGCTGGACCCGGCCTCGGG
CGATCCGTCCGGCCTGTTCGAGCCCTTTCCCAACGAGGATATGGATGCCTGGCCGATTGGGCCGGCGGTGGGCAAGGTCA
GCAATAATTACCCCGGATTGCTCGACGAGGTGTGA

Upstream 100 bases:

>100_bases
AGCGCTATTACGGGCCGTGGGACCGGGATGTGCGCAAGGTGTTTGCCGAAGAGGCGTATTGAGGCTGGCGCGGGCATCTC
GCCCTCGCTAGCGTGACGCC

Downstream 100 bases:

>100_bases
GGCATTGCCCCTGAAGCGCCGGGGCGGGGCATGACCGCATTGCCGGCGCCGCTGGCCTAACGGCAGAAACTGCCTTGAGC
GCCCGCCCTCCCCGTGGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MCGRFFREGVTWGEYYTWLNIMEIQGVEPPEAHWNVAPTTIQPIIRLNHDKSAREMAPARWGLVPSWWTKPLKEWRALSI
NARAEEVAEKPTFRGAYRHKRCLVPVSGYYEWSVQGKSKTPFAFRLRNRRLFCLAGLWDAALIDGSEIQSFTILTTKPND
FTAGIHDRMPVILRPEDYDRWLDPASGDPSGLFEPFPNEDMDAWPIGPAVGKVSNNYPGLLDEV

Sequences:

>Translated_224_residues
MCGRFFREGVTWGEYYTWLNIMEIQGVEPPEAHWNVAPTTIQPIIRLNHDKSAREMAPARWGLVPSWWTKPLKEWRALSI
NARAEEVAEKPTFRGAYRHKRCLVPVSGYYEWSVQGKSKTPFAFRLRNRRLFCLAGLWDAALIDGSEIQSFTILTTKPND
FTAGIHDRMPVILRPEDYDRWLDPASGDPSGLFEPFPNEDMDAWPIGPAVGKVSNNYPGLLDEV
>Mature_224_residues
MCGRFFREGVTWGEYYTWLNIMEIQGVEPPEAHWNVAPTTIQPIIRLNHDKSAREMAPARWGLVPSWWTKPLKEWRALSI
NARAEEVAEKPTFRGAYRHKRCLVPVSGYYEWSVQGKSKTPFAFRLRNRRLFCLAGLWDAALIDGSEIQSFTILTTKPND
FTAGIHDRMPVILRPEDYDRWLDPASGDPSGLFEPFPNEDMDAWPIGPAVGKVSNNYPGLLDEV

Specific function: Unknown

COG id: COG2135

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0361 family [H]

Homologues:

Organism=Escherichia coli, GI48994894, Length=232, Percent_Identity=28.8793103448276, Blast_Score=88, Evalue=5e-19,
Organism=Saccharomyces cerevisiae, GI6323761, Length=200, Percent_Identity=30, Blast_Score=95, Evalue=7e-21,
Organism=Drosophila melanogaster, GI21355761, Length=184, Percent_Identity=27.1739130434783, Blast_Score=73, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003738 [H]

Pfam domain/function: PF02586 DUF159 [H]

EC number: NA

Molecular weight: Translated: 25665; Mature: 25665

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGRFFREGVTWGEYYTWLNIMEIQGVEPPEAHWNVAPTTIQPIIRLNHDKSAREMAPAR
CCCHHHHHCCCCCHHHEEEEEEEECCCCCCCCCCCCCCHHEEEHEEECCCCCHHHHCCHH
WGLVPSWWTKPLKEWRALSINARAEEVAEKPTFRGAYRHKRCLVPVSGYYEWSVQGKSKT
CCCCCHHHHHHHHHHHEEECCCHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEEECCCCC
PFAFRLRNRRLFCLAGLWDAALIDGSEIQSFTILTTKPNDFTAGIHDRMPVILRPEDYDR
CEEEEECCCEEEEEECCCHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCHHH
WLDPASGDPSGLFEPFPNEDMDAWPIGPAVGKVSNNYPGLLDEV
HCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHCCC
>Mature Secondary Structure
MCGRFFREGVTWGEYYTWLNIMEIQGVEPPEAHWNVAPTTIQPIIRLNHDKSAREMAPAR
CCCHHHHHCCCCCHHHEEEEEEEECCCCCCCCCCCCCCHHEEEHEEECCCCCHHHHCCHH
WGLVPSWWTKPLKEWRALSINARAEEVAEKPTFRGAYRHKRCLVPVSGYYEWSVQGKSKT
CCCCCHHHHHHHHHHHEEECCCHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEEECCCCC
PFAFRLRNRRLFCLAGLWDAALIDGSEIQSFTILTTKPNDFTAGIHDRMPVILRPEDYDR
CEEEEECCCEEEEEECCCHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCHHH
WLDPASGDPSGLFEPFPNEDMDAWPIGPAVGKVSNNYPGLLDEV
HCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]