| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798371
Identifier: 114798371
GI number: 114798371
Start: 459625
End: 460329
Strand: Reverse
Name: 114798371
Synonym: HNE_0466
Alternate gene names: NA
Gene position: 460329-459625 (Counterclockwise)
Preceding gene: 114799949
Following gene: 114798476
Centisome position: 12.42
GC content: 64.96
Gene sequence:
>705_bases ATGACATTTTTTGCCGCCGCCCTGCGCCGCCGGGCGCCTTTGCTTTTTGCGGGGCTTTTTGCGGGACTTTTCACGGGCAG CCTGATGCTGGCGCCCGGCATTGCCGCCGCGCAGACCGCCGCCTCGCCAGGGCCGGAAAACTCCAGCGCGCGGGCATATG GCGATGGCTGGAGCTGTGACGCGGGTTACCGCGAAACCGGCAAGCAATGCGACGCCATTACCCTGCCACCCAATGCCTAC CTTTCCGGGGGCGCTTATGGCAGCGGATGGGAATGCAGCTTTGGCTACAAGCTGGAGGGGGCGGGCTGCGTGGCCCTTGC CGTTCCGGCGAACGCTTTTCTCGAGAGTTCGGGCACGCGCTGGCAGTGCGAACGGGGCTATGTTGCCGCGGGCAATCTGT GCGCGCCGATCAAGGTGCCGGAGAATGGCTATCTGACGAATTCAAGCTATGGGCCTGGCTGGGATTGCGACCGGGGCTTT CGCGCGACGGGCAGCAAATGCGTCCCGATCCGCCTGCCCGACAATGCCTATCTGACCAATAGCGGCTCGGGCACGGGCTG GACCTGCGAGCGGGGATTCCGGGTTCGCGGTGAAACGTGCGAGGCGGTTTCGGTGCCGAAATTTGCCCACCTCAATTCAT CCGGCGACGGATGGCAGTGCGACCGCCCGTATCGCCAGATGGGCACCGGATGTGTCGCGCCCTGA
Upstream 100 bases:
>100_bases CGGCGCGTGAAAAGCGCGCTTTCGCCCGCCAAGCTCTGAAGGTTCTGCCGCGCCCAATTGCGGCCGCCCCCACTGCCCGC CTGCGGGCTGAAAGACAGTC
Downstream 100 bases:
>100_bases AGGCGCAGCGCGCCTGAGCAGGACTGCTCAGGAATGAAGCTGGCCAGTCAATTGCCGATGGCGTCGCGCCCCTGCCCCTC CCCCTTCGGGGGATAAGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MTFFAAALRRRAPLLFAGLFAGLFTGSLMLAPGIAAAQTAASPGPENSSARAYGDGWSCDAGYRETGKQCDAITLPPNAY LSGGAYGSGWECSFGYKLEGAGCVALAVPANAFLESSGTRWQCERGYVAAGNLCAPIKVPENGYLTNSSYGPGWDCDRGF RATGSKCVPIRLPDNAYLTNSGSGTGWTCERGFRVRGETCEAVSVPKFAHLNSSGDGWQCDRPYRQMGTGCVAP
Sequences:
>Translated_234_residues MTFFAAALRRRAPLLFAGLFAGLFTGSLMLAPGIAAAQTAASPGPENSSARAYGDGWSCDAGYRETGKQCDAITLPPNAY LSGGAYGSGWECSFGYKLEGAGCVALAVPANAFLESSGTRWQCERGYVAAGNLCAPIKVPENGYLTNSSYGPGWDCDRGF RATGSKCVPIRLPDNAYLTNSGSGTGWTCERGFRVRGETCEAVSVPKFAHLNSSGDGWQCDRPYRQMGTGCVAP >Mature_233_residues TFFAAALRRRAPLLFAGLFAGLFTGSLMLAPGIAAAQTAASPGPENSSARAYGDGWSCDAGYRETGKQCDAITLPPNAYL SGGAYGSGWECSFGYKLEGAGCVALAVPANAFLESSGTRWQCERGYVAAGNLCAPIKVPENGYLTNSSYGPGWDCDRGFR ATGSKCVPIRLPDNAYLTNSGSGTGWTCERGFRVRGETCEAVSVPKFAHLNSSGDGWQCDRPYRQMGTGCVAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24564; Mature: 24432
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFFAAALRRRAPLLFAGLFAGLFTGSLMLAPGIAAAQTAASPGPENSSARAYGDGWSCD CCHHHHHHHHCCCHHHHHHHHHHHHCCHHCCCCCHHHHHCCCCCCCCCCCEECCCCCCCC AGYRETGKQCDAITLPPNAYLSGGAYGSGWECSFGYKLEGAGCVALAVPANAFLESSGTR CCHHHCCCCCCEEEECCCCEECCCCCCCCEEEECCEEECCCCEEEEEECCHHHHHCCCCE WQCERGYVAAGNLCAPIKVPENGYLTNSSYGPGWDCDRGFRATGSKCVPIRLPDNAYLTN EEECCCEEEECCEEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEC SGSGTGWTCERGFRVRGETCEAVSVPKFAHLNSSGDGWQCDRPYRQMGTGCVAP CCCCCCEEECCCCEECCCCCCEECCCCEEECCCCCCCCCCCCCHHHHCCCCCCC >Mature Secondary Structure TFFAAALRRRAPLLFAGLFAGLFTGSLMLAPGIAAAQTAASPGPENSSARAYGDGWSCD CHHHHHHHHCCCHHHHHHHHHHHHCCHHCCCCCHHHHHCCCCCCCCCCCEECCCCCCCC AGYRETGKQCDAITLPPNAYLSGGAYGSGWECSFGYKLEGAGCVALAVPANAFLESSGTR CCHHHCCCCCCEEEECCCCEECCCCCCCCEEEECCEEECCCCEEEEEECCHHHHHCCCCE WQCERGYVAAGNLCAPIKVPENGYLTNSSYGPGWDCDRGFRATGSKCVPIRLPDNAYLTN EEECCCEEEECCEEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEC SGSGTGWTCERGFRVRGETCEAVSVPKFAHLNSSGDGWQCDRPYRQMGTGCVAP CCCCCCEEECCCCEECCCCCCEECCCCEEECCCCCCCCCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA