| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is gspK [H]
Identifier: 114798322
GI number: 114798322
Start: 1937416
End: 1938387
Strand: Direct
Name: gspK [H]
Synonym: HNE_1872
Alternate gene names: 114798322
Gene position: 1937416-1938387 (Clockwise)
Preceding gene: 114799191
Following gene: 114800477
Centisome position: 52.29
GC content: 61.01
Gene sequence:
>972_bases ATGATAAAACCTCATCCCCAACGCGGCGCTGCCCTGCTGTCCATACTCCTGATCGTTGCGGCCCTGGCTGTTGCAGCTCT CATCGCGACGACAGCGATTGCCCGGCAAACCGATCTGGCAAAAGCCGCCGCCCGCCGCTCCGACGCCAGCTGGGCAGCTT ATTCGGCCGAAGCTCTGGCGCTCAGTGCTGTTGGTGAACTCTCCACCCTCACCAATGGACAGCTCACACCCCTGACGACC GGCCTCATGGAGCCTGTCGTTATTCCGGTGCGGGGCGGCGTTGTGTCTCTGGAAGTTTCGGACGCGTCCAACTGCTTCAA TGTCAACGCTCTGGGTAGTCCAGATGAAGGCGCCGCTACACTCGCGCGCCTATCCTGGATCAGCCTCCTGGGCGACATGG AAATCCCCACCACTGACGCAGCCAGCCTCGCCAACGCGCTCAGTGATTGGCTTGATGCAGACAGTGACGCACGCCAGGGC GGCGCGGAGGACGGATATTATCTCACATTGCAGCCCGCCTACCGGGCTGCAAACCAGCTCATGGACAGCCCCCGCGAACT GGCCTCAGTATTGGGGTATTCCAAGGCCCTTCAGGACGCTTTGGAACCTTTCATTTGCGCCCGGCGGGAGCCTTTGATGT CGCGACTGAATATAAATACCCTCCGCCCGGATCAGGCACCGCTACTGCGCGCCAGCTATTCCGAGGCTCTCACTCTGGCG GCGGCAACACGCATACTCGAAAATCGGCCGGAAACAGGATGGCCGGGTGTTGACCAGTTCGAAGCACTCCCTGACATACG CACAATCCCTGAAGGTCAGAAGCGGACGGAAGCCTTGTCGACAACCAGCAGCATGTACCTGGCCGAAGGGCAAACAGTTC TGGACGGCGGAAGCTGGCCCTTCTCCTTCGTCATTTCCGCCGGTGGCGGAGCCGCCCCCACCATTGTCTGGCGCAGGACG GGGGAAGAATAA
Upstream 100 bases:
>100_bases CCTCATCGGCAGACACTCCGTTCCCGGACAAGATTGAACTGACGATGTCATTTGGCGAAGAAGACACACTGACTGCATTG TTTCGCCTAGGCCTGCGCGA
Downstream 100 bases:
>100_bases TGAAATCTGTTCTCTATGTAGCCCTCCCTTCAGATGCGGATGGTTTGATCCAGATTGCCCAGGAACGCGGCGACCGCCTC GAGATTGTAAATCACCGCGG
Product: general secretion pathway protein K
Products: NA
Alternate protein names: Pectic enzymes secretion protein OUTK [H]
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MIKPHPQRGAALLSILLIVAALAVAALIATTAIARQTDLAKAAARRSDASWAAYSAEALALSAVGELSTLTNGQLTPLTT GLMEPVVIPVRGGVVSLEVSDASNCFNVNALGSPDEGAATLARLSWISLLGDMEIPTTDAASLANALSDWLDADSDARQG GAEDGYYLTLQPAYRAANQLMDSPRELASVLGYSKALQDALEPFICARREPLMSRLNINTLRPDQAPLLRASYSEALTLA AATRILENRPETGWPGVDQFEALPDIRTIPEGQKRTEALSTTSSMYLAEGQTVLDGGSWPFSFVISAGGGAAPTIVWRRT GEE
Sequences:
>Translated_323_residues MIKPHPQRGAALLSILLIVAALAVAALIATTAIARQTDLAKAAARRSDASWAAYSAEALALSAVGELSTLTNGQLTPLTT GLMEPVVIPVRGGVVSLEVSDASNCFNVNALGSPDEGAATLARLSWISLLGDMEIPTTDAASLANALSDWLDADSDARQG GAEDGYYLTLQPAYRAANQLMDSPRELASVLGYSKALQDALEPFICARREPLMSRLNINTLRPDQAPLLRASYSEALTLA AATRILENRPETGWPGVDQFEALPDIRTIPEGQKRTEALSTTSSMYLAEGQTVLDGGSWPFSFVISAGGGAAPTIVWRRT GEE >Mature_323_residues MIKPHPQRGAALLSILLIVAALAVAALIATTAIARQTDLAKAAARRSDASWAAYSAEALALSAVGELSTLTNGQLTPLTT GLMEPVVIPVRGGVVSLEVSDASNCFNVNALGSPDEGAATLARLSWISLLGDMEIPTTDAASLANALSDWLDADSDARQG GAEDGYYLTLQPAYRAANQLMDSPRELASVLGYSKALQDALEPFICARREPLMSRLNINTLRPDQAPLLRASYSEALTLA AATRILENRPETGWPGVDQFEALPDIRTIPEGQKRTEALSTTSSMYLAEGQTVLDGGSWPFSFVISAGGGAAPTIVWRRT GEE
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of the multiple pectic enzymes [H]
COG id: COG3156
COG function: function code U; Type II secretory pathway, component PulK
Gene ontology:
Cell location: Cell inner membrane (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP K family [H]
Homologues:
Organism=Escherichia coli, GI1789729, Length=214, Percent_Identity=29.4392523364486, Blast_Score=91, Evalue=9e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005628 [H]
Pfam domain/function: PF03934 GspK [H]
EC number: NA
Molecular weight: Translated: 34094; Mature: 34094
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKPHPQRGAALLSILLIVAALAVAALIATTAIARQTDLAKAAARRSDASWAAYSAEALA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LSAVGELSTLTNGQLTPLTTGLMEPVVIPVRGGVVSLEVSDASNCFNVNALGSPDEGAAT HHHHHHHHHCCCCCCCHHHHHHHCCEEEEECCCEEEEEECCCCCCEEECCCCCCCHHHHH LARLSWISLLGDMEIPTTDAASLANALSDWLDADSDARQGGAEDGYYLTLQPAYRAANQL HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCEEEEECHHHHHHHHH MDSPRELASVLGYSKALQDALEPFICARREPLMSRLNINTLRPDQAPLLRASYSEALTLA HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH AATRILENRPETGWPGVDQFEALPDIRTIPEGQKRTEALSTTSSMYLAEGQTVLDGGSWP HHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHEEECCCEEEECCCCC FSFVISAGGGAAPTIVWRRTGEE EEEEEECCCCCCCEEEEECCCCC >Mature Secondary Structure MIKPHPQRGAALLSILLIVAALAVAALIATTAIARQTDLAKAAARRSDASWAAYSAEALA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LSAVGELSTLTNGQLTPLTTGLMEPVVIPVRGGVVSLEVSDASNCFNVNALGSPDEGAAT HHHHHHHHHCCCCCCCHHHHHHHCCEEEEECCCEEEEEECCCCCCEEECCCCCCCHHHHH LARLSWISLLGDMEIPTTDAASLANALSDWLDADSDARQGGAEDGYYLTLQPAYRAANQL HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCEEEEECHHHHHHHHH MDSPRELASVLGYSKALQDALEPFICARREPLMSRLNINTLRPDQAPLLRASYSEALTLA HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH AATRILENRPETGWPGVDQFEALPDIRTIPEGQKRTEALSTTSSMYLAEGQTVLDGGSWP HHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHEEECCCEEEECCCCC FSFVISAGGGAAPTIVWRRTGEE EEEEEECCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8326859 [H]