| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is narK [H]
Identifier: 114798304
GI number: 114798304
Start: 1584853
End: 1587588
Strand: Direct
Name: narK [H]
Synonym: HNE_1559
Alternate gene names: 114798304
Gene position: 1584853-1587588 (Clockwise)
Preceding gene: 114797605
Following gene: 114798640
Centisome position: 42.78
GC content: 59.65
Gene sequence:
>2736_bases ATGCCACTTTCCACTCCAACGCCCGCAAAAGGCGCCGGGCGCGCCCTGGGCCTGACGACATTTGCTTTTACGGCCTGTTT TGCCGTGTGGACGATCTTTGCCATTCTCGGCTTGCAGATTCAGAAGGAACTCGGGCTCTCCGAGACTCAATTCGGACTGC TCGTGGGCACTCCGATCCTGACCGGATCCCTTTCCCGGCTGTTCCTTGGAATATGGGCTGACCAGTTCGGCGGCCGAATT GTCAATCTCGCCGTAATGCTGCTGTCAGCGCTGGCGACCTGGCTTTTGACATTCGCAACGACCTATCCGGAGTTTCTCCT GGCGGCGTTGGGAATAGGCATTGCGGGCGGATCTTTCTCCGTCTCGATCACCTATGTCTCGAAATTCTTCCCACCGGAAA AGCAGGGGTCTGCTCTTGGGATCGTCGGCGCCGGCAATGTAGGCGCAGCGGTCACGAAATTTGCGGCGCCCATCGTCATG GCCTCGATGGGCTGGAAGGGTGTCGCCAATGTCTGGGCGATCGCGCTCGTGCTTGTGGCGCTCGTCTTCTTCTTCCTGAC GTCTGACGATCCTGAGCTCGCCGAGCGCCGCCGCACGGGCGCAAAGCCACGCAGTTTTGCCTCCCAGTTCGAGCCGCTCC GCAATATCCAGGTCTGGCGCTTCTCGCTTTATTACTTCTTCGTGTTCGGCGCGTTCGTTGCGCTGGCGCTCTGGCTCCCG CGCTATCTGATCGGCGTTTATGGCTTCGATGTGAAGACAGCCGGTATGTTGGCAGCGGCCTATTCGATCCCGGCTTCCAT TTTCCGGATTTATGGCGGGCACCTCTCCGACAGGGTCGGCGCGCGGACCGTTATGTACTGGACATTCCTCGTCTCAGTCG TGGTTACCTTTTTCCTGTCTTACCCGCCGACTTCCTATGTCGTCGATGGCGTGCGCGGGCCAATCAGCTTCCGGCTTGCC ACAGGTCCGGTCGCCTTTGTGATCGCGATCTTCGTGCTCGGCTTCTTCATGAGCCTCGGCAAGGCAGCGGTCTACAAGCA CATCCCGGTCTATTATCCCAAGGACGTCGGCGCTGTCGGTGGTCTGGTCGGGCTGATGGGCGGGCTCGGTGGCTTCGTCC TTCCGATACTGTTTGGTGTACTGAATGACCTGACCGGCATCTGGACGAGCTGCTTCATGCTGCTGTTCCTGATCGTATCG GCTTCGCTGATCTGGATGCACCTTGCTATCCGGCACATGGAGCGCGAAGCGGCCGGCGCAACGCTCGATTCCCTGCCGCA ACTGCCGGAGATGCAGCCCATTCATGGAGAGCGCGAAGCCCGGGCGCTGGCGCCTAAGCTCATCGAGGACTGGCGCCCGG AAGAGCCCCAGTTCTGGGAGGAGACCGGCAAGAAGATTGCCAGCCGCAATCTCTGGCTCTCGATCCCAGCCCTGTTCCTG TCCTTCGCTGTCTGGATGGTGTGGTCGGTAGTTGTCGCCAAACTGCCGCAAATCGGATTTGCCTACACGACAGACCAGCT TTTCTGGCTCGCTGCATTGCCCGGCCTGTCGGGGGCCACGCTGAGGATTTTCTATAGCTTCATGGTGCCGGTGTTCGGCG GACGGCTGTGGACGACGCTGACGACCTGGTCCCTCATGCTCCCCGCGCTCGGGATCGGTTTTGCCGTTCAGAACCCCGAA ACGCCCTATTGGATCATGCTTGTGCTCGCATTGCTGTGCGGCTTCGGCGGCGGGAACTTCGCATCGTCGATGTCAAATAT CGGCTTCTTCTATCCTAAGCGTGAGAAGGGAAATGCGCTCGCCATGAATGCCGGGCTCGGCAATCTGGGGGTCAGCGCGA TGCAGTTTCTCGTGCCTCTTGTCATTACTGTCGGCGTGTTTGGCTTTCTCGGCGGGCAGCCACAGGCAACAGAGGAGGGG GGAGAACTCTTCCTCCAGAATGCCGGATTTATCTGGGTACCCCTCATTATAGCCAGCGCCTTTGCCGCCTGGTTCGGAAT GAATGACCTGTCCAGCGCCAAGGCATCCTTCTCAGATCAGGCCGTTATTTTCAAACGCCGGCACAACTGGATCATGTGCT GGCTCTACACGGGAACGTTCGGCTCTTTCATCGGCTTTTCTGCGGCCTTTCCGCTGCTGACGAAAACGCAGTTTCCGGAA ATCAACGTTCTGCAGATTGCCTTCCTCGGCCCCCTGGTCGGCGCATTGTCCCGCTCCTTCACCGGATGGATCGCCGACCG GTTTGGCGGCGCACGGGTCACGCTCGCGGTCTTTGTCCTGATGATGGTGGGTACAGTCGGGGTCCTCTACTTCCTTGCCA ACAAGGACGCACCGGGAGCTTTCATAGGGTTCTTCGTCTCCTTCATCGTCCTTTTCTTTGCAACGGGGGTCGGAAATGCC TCGACCTTCCAGATGATCCCAGCGATCATGCGCAAGGAGATTGACCGGCTGGAGCCGCAGATGAGTGGAGCCGACCGTCT GCGCCAGGCCGAAAAGGAAAGCGCCGCCATCACTGGCTTTACCAGCGCCATCGCTGCGTACGGAGCTTTCTTCATCCCGA AGAGCTTCGGTATGTCGCTTGCCGCCTCTGGCAGCGCCGCACCTGCGCTCTACGGGTTCCTCGCCTTCTATGTCTCCTGC CTTCTCGTCACCTGGTTCGTCTATGCGCGCCCCGGCGGTCTCCTCTTCGATGTGGAAAACCGCAAGCGCTCCGGACCTGC AACAGCCGCTGCCTAA
Upstream 100 bases:
>100_bases CAAAAGCGGACATCCGCCAAGAAAGCGCTTCACAATTATCAAGGCACAGGCGCCCCACTGCTGACACCTCTGGACCCCGA ACACGAGACGCGGGGGCCAT
Downstream 100 bases:
>100_bases AAAGGAACCTTTTCCATGAGCCATACACTCGACAGACTGACTTTCTTCCGGCGGCAGACTGAGACCTTTTCCGGCGGACA CGGCGTTCTCAATGATGAGG
Product: nitrite extrusion protein
Products: NA
Alternate protein names: Nitrite facilitator 1 [H]
Number of amino acids: Translated: 911; Mature: 910
Protein sequence:
>911_residues MPLSTPTPAKGAGRALGLTTFAFTACFAVWTIFAILGLQIQKELGLSETQFGLLVGTPILTGSLSRLFLGIWADQFGGRI VNLAVMLLSALATWLLTFATTYPEFLLAALGIGIAGGSFSVSITYVSKFFPPEKQGSALGIVGAGNVGAAVTKFAAPIVM ASMGWKGVANVWAIALVLVALVFFFLTSDDPELAERRRTGAKPRSFASQFEPLRNIQVWRFSLYYFFVFGAFVALALWLP RYLIGVYGFDVKTAGMLAAAYSIPASIFRIYGGHLSDRVGARTVMYWTFLVSVVVTFFLSYPPTSYVVDGVRGPISFRLA TGPVAFVIAIFVLGFFMSLGKAAVYKHIPVYYPKDVGAVGGLVGLMGGLGGFVLPILFGVLNDLTGIWTSCFMLLFLIVS ASLIWMHLAIRHMEREAAGATLDSLPQLPEMQPIHGEREARALAPKLIEDWRPEEPQFWEETGKKIASRNLWLSIPALFL SFAVWMVWSVVVAKLPQIGFAYTTDQLFWLAALPGLSGATLRIFYSFMVPVFGGRLWTTLTTWSLMLPALGIGFAVQNPE TPYWIMLVLALLCGFGGGNFASSMSNIGFFYPKREKGNALAMNAGLGNLGVSAMQFLVPLVITVGVFGFLGGQPQATEEG GELFLQNAGFIWVPLIIASAFAAWFGMNDLSSAKASFSDQAVIFKRRHNWIMCWLYTGTFGSFIGFSAAFPLLTKTQFPE INVLQIAFLGPLVGALSRSFTGWIADRFGGARVTLAVFVLMMVGTVGVLYFLANKDAPGAFIGFFVSFIVLFFATGVGNA STFQMIPAIMRKEIDRLEPQMSGADRLRQAEKESAAITGFTSAIAAYGAFFIPKSFGMSLAASGSAAPALYGFLAFYVSC LLVTWFVYARPGGLLFDVENRKRSGPATAAA
Sequences:
>Translated_911_residues MPLSTPTPAKGAGRALGLTTFAFTACFAVWTIFAILGLQIQKELGLSETQFGLLVGTPILTGSLSRLFLGIWADQFGGRI VNLAVMLLSALATWLLTFATTYPEFLLAALGIGIAGGSFSVSITYVSKFFPPEKQGSALGIVGAGNVGAAVTKFAAPIVM ASMGWKGVANVWAIALVLVALVFFFLTSDDPELAERRRTGAKPRSFASQFEPLRNIQVWRFSLYYFFVFGAFVALALWLP RYLIGVYGFDVKTAGMLAAAYSIPASIFRIYGGHLSDRVGARTVMYWTFLVSVVVTFFLSYPPTSYVVDGVRGPISFRLA TGPVAFVIAIFVLGFFMSLGKAAVYKHIPVYYPKDVGAVGGLVGLMGGLGGFVLPILFGVLNDLTGIWTSCFMLLFLIVS ASLIWMHLAIRHMEREAAGATLDSLPQLPEMQPIHGEREARALAPKLIEDWRPEEPQFWEETGKKIASRNLWLSIPALFL SFAVWMVWSVVVAKLPQIGFAYTTDQLFWLAALPGLSGATLRIFYSFMVPVFGGRLWTTLTTWSLMLPALGIGFAVQNPE TPYWIMLVLALLCGFGGGNFASSMSNIGFFYPKREKGNALAMNAGLGNLGVSAMQFLVPLVITVGVFGFLGGQPQATEEG GELFLQNAGFIWVPLIIASAFAAWFGMNDLSSAKASFSDQAVIFKRRHNWIMCWLYTGTFGSFIGFSAAFPLLTKTQFPE INVLQIAFLGPLVGALSRSFTGWIADRFGGARVTLAVFVLMMVGTVGVLYFLANKDAPGAFIGFFVSFIVLFFATGVGNA STFQMIPAIMRKEIDRLEPQMSGADRLRQAEKESAAITGFTSAIAAYGAFFIPKSFGMSLAASGSAAPALYGFLAFYVSC LLVTWFVYARPGGLLFDVENRKRSGPATAAA >Mature_910_residues PLSTPTPAKGAGRALGLTTFAFTACFAVWTIFAILGLQIQKELGLSETQFGLLVGTPILTGSLSRLFLGIWADQFGGRIV NLAVMLLSALATWLLTFATTYPEFLLAALGIGIAGGSFSVSITYVSKFFPPEKQGSALGIVGAGNVGAAVTKFAAPIVMA SMGWKGVANVWAIALVLVALVFFFLTSDDPELAERRRTGAKPRSFASQFEPLRNIQVWRFSLYYFFVFGAFVALALWLPR YLIGVYGFDVKTAGMLAAAYSIPASIFRIYGGHLSDRVGARTVMYWTFLVSVVVTFFLSYPPTSYVVDGVRGPISFRLAT GPVAFVIAIFVLGFFMSLGKAAVYKHIPVYYPKDVGAVGGLVGLMGGLGGFVLPILFGVLNDLTGIWTSCFMLLFLIVSA SLIWMHLAIRHMEREAAGATLDSLPQLPEMQPIHGEREARALAPKLIEDWRPEEPQFWEETGKKIASRNLWLSIPALFLS FAVWMVWSVVVAKLPQIGFAYTTDQLFWLAALPGLSGATLRIFYSFMVPVFGGRLWTTLTTWSLMLPALGIGFAVQNPET PYWIMLVLALLCGFGGGNFASSMSNIGFFYPKREKGNALAMNAGLGNLGVSAMQFLVPLVITVGVFGFLGGQPQATEEGG ELFLQNAGFIWVPLIIASAFAAWFGMNDLSSAKASFSDQAVIFKRRHNWIMCWLYTGTFGSFIGFSAAFPLLTKTQFPEI NVLQIAFLGPLVGALSRSFTGWIADRFGGARVTLAVFVLMMVGTVGVLYFLANKDAPGAFIGFFVSFIVLFFATGVGNAS TFQMIPAIMRKEIDRLEPQMSGADRLRQAEKESAAITGFTSAIAAYGAFFIPKSFGMSLAASGSAAPALYGFLAFYVSCL LVTWFVYARPGGLLFDVENRKRSGPATAAA
Specific function: Involved in excretion of nitrite produced by the dissimilatory reduction of nitrate [H]
COG id: COG2223
COG function: function code P; Nitrate/nitrite transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family [H]
Homologues:
Organism=Escherichia coli, GI1787475, Length=459, Percent_Identity=51.8518518518518, Blast_Score=458, Evalue=1e-130, Organism=Escherichia coli, GI1787743, Length=461, Percent_Identity=51.6268980477223, Blast_Score=427, Evalue=1e-120, Organism=Escherichia coli, GI2367379, Length=241, Percent_Identity=25.3112033195021, Blast_Score=63, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004737 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 98558; Mature: 98427
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSTPTPAKGAGRALGLTTFAFTACFAVWTIFAILGLQIQKELGLSETQFGLLVGTPIL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEECCHHH TGSLSRLFLGIWADQFGGRIVNLAVMLLSALATWLLTFATTYPEFLLAALGIGIAGGSFS HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE VSITYVSKFFPPEKQGSALGIVGAGNVGAAVTKFAAPIVMASMGWKGVANVWAIALVLVA EEEEEHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LVFFFLTSDDPELAERRRTGAKPRSFASQFEPLRNIQVWRFSLYYFFVFGAFVALALWLP HHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH RYLIGVYGFDVKTAGMLAAAYSIPASIFRIYGGHLSDRVGARTVMYWTFLVSVVVTFFLS HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC YPPTSYVVDGVRGPISFRLATGPVAFVIAIFVLGFFMSLGKAAVYKHIPVYYPKDVGAVG CCCHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH GLVGLMGGLGGFVLPILFGVLNDLTGIWTSCFMLLFLIVSASLIWMHLAIRHMEREAAGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TLDSLPQLPEMQPIHGEREARALAPKLIEDWRPEEPQFWEETGKKIASRNLWLSIPALFL CHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHEEHHHHHH SFAVWMVWSVVVAKLPQIGFAYTTDQLFWLAALPGLSGATLRIFYSFMVPVFGGRLWTTL HHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHH TTWSLMLPALGIGFAVQNPETPYWIMLVLALLCGFGGGNFASSMSNIGFFYPKREKGNAL HHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCEE AMNAGLGNLGVSAMQFLVPLVITVGVFGFLGGQPQATEEGGELFLQNAGFIWVPLIIASA EEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHH FAAWFGMNDLSSAKASFSDQAVIFKRRHNWIMCWLYTGTFGSFIGFSAAFPLLTKTQFPE HHHHHCCCHHHHHHHCCCCCHHEEEECCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCC INVLQIAFLGPLVGALSRSFTGWIADRFGGARVTLAVFVLMMVGTVGVLYFLANKDAPGA CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH FIGFFVSFIVLFFATGVGNASTFQMIPAIMRKEIDRLEPQMSGADRLRQAEKESAAITGF HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH TSAIAAYGAFFIPKSFGMSLAASGSAAPALYGFLAFYVSCLLVTWFVYARPGGLLFDVEN HHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC RKRSGPATAAA CCCCCCCCCCC >Mature Secondary Structure PLSTPTPAKGAGRALGLTTFAFTACFAVWTIFAILGLQIQKELGLSETQFGLLVGTPIL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEECCHHH TGSLSRLFLGIWADQFGGRIVNLAVMLLSALATWLLTFATTYPEFLLAALGIGIAGGSFS HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE VSITYVSKFFPPEKQGSALGIVGAGNVGAAVTKFAAPIVMASMGWKGVANVWAIALVLVA EEEEEHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LVFFFLTSDDPELAERRRTGAKPRSFASQFEPLRNIQVWRFSLYYFFVFGAFVALALWLP HHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH RYLIGVYGFDVKTAGMLAAAYSIPASIFRIYGGHLSDRVGARTVMYWTFLVSVVVTFFLS HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC YPPTSYVVDGVRGPISFRLATGPVAFVIAIFVLGFFMSLGKAAVYKHIPVYYPKDVGAVG CCCHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH GLVGLMGGLGGFVLPILFGVLNDLTGIWTSCFMLLFLIVSASLIWMHLAIRHMEREAAGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TLDSLPQLPEMQPIHGEREARALAPKLIEDWRPEEPQFWEETGKKIASRNLWLSIPALFL CHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHEEHHHHHH SFAVWMVWSVVVAKLPQIGFAYTTDQLFWLAALPGLSGATLRIFYSFMVPVFGGRLWTTL HHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHH TTWSLMLPALGIGFAVQNPETPYWIMLVLALLCGFGGGNFASSMSNIGFFYPKREKGNAL HHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCEE AMNAGLGNLGVSAMQFLVPLVITVGVFGFLGGQPQATEEGGELFLQNAGFIWVPLIIASA EEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHH FAAWFGMNDLSSAKASFSDQAVIFKRRHNWIMCWLYTGTFGSFIGFSAAFPLLTKTQFPE HHHHHCCCHHHHHHHCCCCCHHEEEECCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCC INVLQIAFLGPLVGALSRSFTGWIADRFGGARVTLAVFVLMMVGTVGVLYFLANKDAPGA CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH FIGFFVSFIVLFFATGVGNASTFQMIPAIMRKEIDRLEPQMSGADRLRQAEKESAAITGF HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH TSAIAAYGAFFIPKSFGMSLAASGSAAPALYGFLAFYVSCLLVTWFVYARPGGLLFDVEN HHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC RKRSGPATAAA CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2668029; 8905232; 9278503; 2657652 [H]