| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is pspC [C]
Identifier: 114798290
GI number: 114798290
Start: 3457967
End: 3458383
Strand: Direct
Name: pspC [C]
Synonym: HNE_3296
Alternate gene names: 114798290
Gene position: 3457967-3458383 (Clockwise)
Preceding gene: 114798410
Following gene: 114797327
Centisome position: 93.33
GC content: 60.19
Gene sequence:
>417_bases ATGTCCCGCCCCAACGACCCTTACGCCTCCCAGAACCCGAAACGCTTTTACCGCTCCCGTCAGGACAAGGTCATTGCCGG CGTCTGCGGCGGCATCGCTGAAAGATTTGGCTGGGAACCCGTTCTCGTCCGCATCCTGACGGTTCTGGCAACTCTCTTCT TCATGGGGCCGATGGCCCCCATCATCTACATCGTGATCTGGATGATCACGCCGCGCGCGCCCATCGGCTACGGCTCGATG AGCCCGGACGAAGACGCCTTCTGGCGCGGCGTGCAGGACCGCCCCCGCGCGACCTTCGGCACCATCAAGTACACCTTTAT GGATCTCGACGAGCGCCTGAAGAATATCGAACGCACAGTGACTTCGGATGAATGGCGCCTTCGCCAGGAATTCCGCGACC TTGAAAAAGGCAACTAA
Upstream 100 bases:
>100_bases TCGAAACCCTCGAATCCCTGCTCGAAGCCCGCGACGCACAGGCCCATCGCCAGCCGCCGCGCCCACACCGCACCCACCTT GACGATTAAGGAGACAGGAA
Downstream 100 bases:
>100_bases CCGGCCACTCGGCCCAACCACACCTACTCCGTCCAAGGACCGGAACGATGAAACAGGGGAATATCGTGCACAATAACTGG CTACTCGGCGGACTTGCCGT
Product: phage shock protein C
Products: NA
Alternate protein names: Phage Shock Protein C
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MSRPNDPYASQNPKRFYRSRQDKVIAGVCGGIAERFGWEPVLVRILTVLATLFFMGPMAPIIYIVIWMITPRAPIGYGSM SPDEDAFWRGVQDRPRATFGTIKYTFMDLDERLKNIERTVTSDEWRLRQEFRDLEKGN
Sequences:
>Translated_138_residues MSRPNDPYASQNPKRFYRSRQDKVIAGVCGGIAERFGWEPVLVRILTVLATLFFMGPMAPIIYIVIWMITPRAPIGYGSM SPDEDAFWRGVQDRPRATFGTIKYTFMDLDERLKNIERTVTSDEWRLRQEFRDLEKGN >Mature_137_residues SRPNDPYASQNPKRFYRSRQDKVIAGVCGGIAERFGWEPVLVRILTVLATLFFMGPMAPIIYIVIWMITPRAPIGYGSMS PDEDAFWRGVQDRPRATFGTIKYTFMDLDERLKNIERTVTSDEWRLRQEFRDLEKGN
Specific function: The Phage Shock Protein (Psp) Operon (Pspabce) May Play A Significant Role In The Competition For Survival Under Nutrient- Or Energy-Limited Conditions. Pspc Is Involved In Transcription Regulation. [C]
COG id: COG1983
COG function: function code KT; Putative stress-responsive transcriptional regulator
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16053; Mature: 15922
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPNDPYASQNPKRFYRSRQDKVIAGVCGGIAERFGWEPVLVRILTVLATLFFMGPMAP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHH IIYIVIWMITPRAPIGYGSMSPDEDAFWRGVQDRPRATFGTIKYTFMDLDERLKNIERTV HHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH TSDEWRLRQEFRDLEKGN CCHHHHHHHHHHHHCCCC >Mature Secondary Structure SRPNDPYASQNPKRFYRSRQDKVIAGVCGGIAERFGWEPVLVRILTVLATLFFMGPMAP CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHH IIYIVIWMITPRAPIGYGSMSPDEDAFWRGVQDRPRATFGTIKYTFMDLDERLKNIERTV HHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH TSDEWRLRQEFRDLEKGN CCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA