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The map label for this gene is bkdR [H]

Identifier: 114798269

GI number: 114798269

Start: 1648706

End: 1649191

Strand: Reverse

Name: bkdR [H]

Synonym: HNE_1613

Alternate gene names: 114798269

Gene position: 1649191-1648706 (Counterclockwise)

Preceding gene: 114798514

Following gene: 114800158

Centisome position: 44.51

GC content: 54.32

Gene sequence:

>486_bases
TTGACTACCTCCATCGACCGAATTGACCGCCGGATACTTGAAGAGCTCCAGGCCGACGCGAGTCTGTCAGCCAGCGCCCT
CGGGGAAAAAGTGGGATTGTCTCAGACGGCATGCTGGCGGCGAGTACAGCGCCTGGAAGAAGAAGGTGTGATCCGGAAAA
GGGTCGCTCTGGTCGACGCCAGGGCGGTGGGGTGCGAGACCATCATTCTGGCAAATGTAAAACTAACCGCCCACGGACGT
TCCAATCTGGAAGACGTCGCCGAACGTATCCGGGAAATTCCGAATGTACTCGAATGCTTTGTCGTTCTGGGCAGTCAGGA
TTTCTTCCTGAAGATCGCTGTTAAAGACATTTTCGCATACGAGAAGCTGTTCTTTGAGAAGCTCTCCACGCTCAATGGCG
TCGCTGAAGTCCGCAGTTCAGTAGCATTGTCGCAGATCAAGAACGACACCGCCCTTCCTGTAACGGAAACTTCGGGAAAG
ACCTGA

Upstream 100 bases:

>100_bases
ATATATAGCTGGGAATCCGCGCAATGTGCTTGCTTGCTCTCGATTTTTGAGGATTTAAATGCAACGATATTGCGCGCCAT
CAGATTCAGGAGCATAAAAA

Downstream 100 bases:

>100_bases
AGGAGGCGCGCAGGCGCTGATAAGGGCTACCGCAGAAGCGAGGGTGCAGATCGCCTTCCATAAAAGTGAGGCAATCGGCG
TGCGCGACATCAACCTGCAC

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MTTSIDRIDRRILEELQADASLSASALGEKVGLSQTACWRRVQRLEEEGVIRKRVALVDARAVGCETIILANVKLTAHGR
SNLEDVAERIREIPNVLECFVVLGSQDFFLKIAVKDIFAYEKLFFEKLSTLNGVAEVRSSVALSQIKNDTALPVTETSGK
T

Sequences:

>Translated_161_residues
MTTSIDRIDRRILEELQADASLSASALGEKVGLSQTACWRRVQRLEEEGVIRKRVALVDARAVGCETIILANVKLTAHGR
SNLEDVAERIREIPNVLECFVVLGSQDFFLKIAVKDIFAYEKLFFEKLSTLNGVAEVRSSVALSQIKNDTALPVTETSGK
T
>Mature_160_residues
TTSIDRIDRRILEELQADASLSASALGEKVGLSQTACWRRVQRLEEEGVIRKRVALVDARAVGCETIILANVKLTAHGRS
NLEDVAERIREIPNVLECFVVLGSQDFFLKIAVKDIFAYEKLFFEKLSTLNGVAEVRSSVALSQIKNDTALPVTETSGKT

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=33.3333333333333, Blast_Score=106, Evalue=8e-25,
Organism=Escherichia coli, GI1787116, Length=148, Percent_Identity=35.1351351351351, Blast_Score=98, Evalue=3e-22,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17793; Mature: 17661

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSIDRIDRRILEELQADASLSASALGEKVGLSQTACWRRVQRLEEEGVIRKRVALVDA
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RAVGCETIILANVKLTAHGRSNLEDVAERIREIPNVLECFVVLGSQDFFLKIAVKDIFAY
HHHCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHH
EKLFFEKLSTLNGVAEVRSSVALSQIKNDTALPVTETSGKT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTSIDRIDRRILEELQADASLSASALGEKVGLSQTACWRRVQRLEEEGVIRKRVALVDA
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RAVGCETIILANVKLTAHGRSNLEDVAERIREIPNVLECFVVLGSQDFFLKIAVKDIFAY
HHHCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHH
EKLFFEKLSTLNGVAEVRSSVALSQIKNDTALPVTETSGKT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]