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The map label for this gene is traG [H]

Identifier: 114798235

GI number: 114798235

Start: 1474788

End: 1476200

Strand: Direct

Name: traG [H]

Synonym: HNE_1445

Alternate gene names: 114798235

Gene position: 1474788-1476200 (Clockwise)

Preceding gene: 114797466

Following gene: 114798901

Centisome position: 39.81

GC content: 63.48

Gene sequence:

>1413_bases
ATGTCTCCTTCAAAAATTCTGATTGGCCAGTTCTTCATTGTCCTGACGATCATCCTTGCCGCAACCTGGTCTGCGACCCA
GTGGGCTGCCCATTCGCTCGGCTATCAGTCCGCGCTCGGCCCGCCCTGGTTCGTCGTCAATGACATACCGGTCTATATTC
CCTGGCGGCTTTATCAGTGGTGGTACGCCTACGAGGCTTATGCGCCCGGCGTGTTCGCCCGGGCCGGCGCGATCGCGGCC
AGTGGCGGGCTCCTGGGTATCCTGGCTGCGGTCATCGGGTCACTCTGGCGCGCGCGCTGGGAGCGGCATGTGACGACCTA
CGGCTCAGCACGCTGGGCGAACCGGCGGGACATCAGGAAGGCAGGGCTCCTTCGCAATGACGGCGTCCTCCTCGGGCTAT
GGCAGGGGCGCTACCTGCGCCATGGCGGCCCGGAACATGTGCTCGCCGTTGCGCCCACCCGGTCGGGCAAGGGGGTCGGC
CTTGTCATCCCGACGCTTCTGTCCTGGACCGGGAGCTGCGTGGTTCATGATATCAAGGGTGAGAACTGGCAGCTGACATC
TGGCTGGCGGTCAACGCTCGGTCCTTGCATCCGCTTTGATCCGACCGACCGGGAGAGCCTGCGCTACAATCCGCTTCTCG
AAATCCGCAAAGGGGAGTTTGAGGTTCGCGACGTCCAGAACATTGCCGACATCCTCGTGGATCCTGAAGGCAGCGCCGAG
CGGCGCGATCACTGGGACAAGACAGGCTACGCCCTCCTCGTCGCGGTCATCCTGCATGTGCTCTATGCCGAGGAGGACAA
GTCCCTGGCCGGCTGCGCCCGCTTCCTCGCCCATCCCGAGCGCACCCTGTTCCAGACTCTCGACCGGATGCGCACGGCCC
ATCATCTTGTCGGACCAGACGGGCGGGGCCGGGTCCACCCCAAGGTCGCCGAAGGCGCCCGCGCGATGCTCAACAAGTCT
GAGAACGAACGCTCCGGCGTCCTCTCGACAACACTGACCTTGCTGGAAGTCTATACCGATCCGGTGATCGCCCGGCTGAC
GTCTGCCAGCGACTGGGGCGTGATGGATCTGGTGGCGGCTGCTCGGCCCGTTTCACTCTATCTGGTTGTTCCGCCCTCGG
ACATCTCCCGGACGCGGCCTCTGATGCGTCTGATACTCAACCAGATCGGGCGCCGGCTGACCGAAGAACTGCCCGGCTCC
TCCCGGAGAGAGCTGCTCCTGATGCTGGATGAGTTTCCGGCGCTCGGTCGGCTTGATTTTTTTGAGACGGCGCTCGCCTT
CCTGGCCGGCTACCGTATCCGGGCATTCCTGATCACTCAGTCCCTGAACCAGATCGAGAAAGCTTACGGGCCGAACAATT
CAATCCTCGACAATTGTCATGTCCGGGTTCGGGCGGCGAGCGCCAGAGGGTAG

Upstream 100 bases:

>100_bases
GCGATATGCCGCCATTTGCCGCCATTTGCCGCCATTCACGATGGCCAGCCGGGCATCCTGAGGGGAAACTGGCCTGAAGC
AGAAACCGGAATCTTGTCCC

Downstream 100 bases:

>100_bases
CGATCGCGCGGGCCCTGATGCGGCGCCCGCGGCTGGTGCTGGCTGATGAACCCACGTCGGCCCTCGATCCGGAGACCGAA
TCCCGCATTCTTGGGGAATT

Product: TraG/TraD family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 470; Mature: 469

Protein sequence:

>470_residues
MSPSKILIGQFFIVLTIILAATWSATQWAAHSLGYQSALGPPWFVVNDIPVYIPWRLYQWWYAYEAYAPGVFARAGAIAA
SGGLLGILAAVIGSLWRARWERHVTTYGSARWANRRDIRKAGLLRNDGVLLGLWQGRYLRHGGPEHVLAVAPTRSGKGVG
LVIPTLLSWTGSCVVHDIKGENWQLTSGWRSTLGPCIRFDPTDRESLRYNPLLEIRKGEFEVRDVQNIADILVDPEGSAE
RRDHWDKTGYALLVAVILHVLYAEEDKSLAGCARFLAHPERTLFQTLDRMRTAHHLVGPDGRGRVHPKVAEGARAMLNKS
ENERSGVLSTTLTLLEVYTDPVIARLTSASDWGVMDLVAAARPVSLYLVVPPSDISRTRPLMRLILNQIGRRLTEELPGS
SRRELLLMLDEFPALGRLDFFETALAFLAGYRIRAFLITQSLNQIEKAYGPNNSILDNCHVRVRAASARG

Sequences:

>Translated_470_residues
MSPSKILIGQFFIVLTIILAATWSATQWAAHSLGYQSALGPPWFVVNDIPVYIPWRLYQWWYAYEAYAPGVFARAGAIAA
SGGLLGILAAVIGSLWRARWERHVTTYGSARWANRRDIRKAGLLRNDGVLLGLWQGRYLRHGGPEHVLAVAPTRSGKGVG
LVIPTLLSWTGSCVVHDIKGENWQLTSGWRSTLGPCIRFDPTDRESLRYNPLLEIRKGEFEVRDVQNIADILVDPEGSAE
RRDHWDKTGYALLVAVILHVLYAEEDKSLAGCARFLAHPERTLFQTLDRMRTAHHLVGPDGRGRVHPKVAEGARAMLNKS
ENERSGVLSTTLTLLEVYTDPVIARLTSASDWGVMDLVAAARPVSLYLVVPPSDISRTRPLMRLILNQIGRRLTEELPGS
SRRELLLMLDEFPALGRLDFFETALAFLAGYRIRAFLITQSLNQIEKAYGPNNSILDNCHVRVRAASARG
>Mature_469_residues
SPSKILIGQFFIVLTIILAATWSATQWAAHSLGYQSALGPPWFVVNDIPVYIPWRLYQWWYAYEAYAPGVFARAGAIAAS
GGLLGILAAVIGSLWRARWERHVTTYGSARWANRRDIRKAGLLRNDGVLLGLWQGRYLRHGGPEHVLAVAPTRSGKGVGL
VIPTLLSWTGSCVVHDIKGENWQLTSGWRSTLGPCIRFDPTDRESLRYNPLLEIRKGEFEVRDVQNIADILVDPEGSAER
RDHWDKTGYALLVAVILHVLYAEEDKSLAGCARFLAHPERTLFQTLDRMRTAHHLVGPDGRGRVHPKVAEGARAMLNKSE
NERSGVLSTTLTLLEVYTDPVIARLTSASDWGVMDLVAAARPVSLYLVVPPSDISRTRPLMRLILNQIGRRLTEELPGSS
RRELLLMLDEFPALGRLDFFETALAFLAGYRIRAFLITQSLNQIEKAYGPNNSILDNCHVRVRAASARG

Specific function: Required for conjugative transfer of plasmid RP4. Binds tightly and specifically to the relaxase traI. Can also bind to DNA without sequence specificity. May form a pore-like structure that could serve as a channel for DNA transfer [H]

COG id: COG3505

COG function: function code U; Type IV secretory pathway, VirD4 components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the virD4/traG family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003688 [H]

Pfam domain/function: PF02534 TraG [H]

EC number: NA

Molecular weight: Translated: 52374; Mature: 52243

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPSKILIGQFFIVLTIILAATWSATQWAAHSLGYQSALGPPWFVVNDIPVYIPWRLYQW
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHCCCCCEEEEECCCEEECHHHHHH
WYAYEAYAPGVFARAGAIAASGGLLGILAAVIGSLWRARWERHVTTYGSARWANRRDIRK
HHHHHHHCCCHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
AGLLRNDGVLLGLWQGRYLRHGGPEHVLAVAPTRSGKGVGLVIPTLLSWTGSCVVHDIKG
HCCEECCCEEEEEECCCHHHCCCCCCEEEEECCCCCCCCEEHHHHHHCCCCCEEEEECCC
ENWQLTSGWRSTLGPCIRFDPTDRESLRYNPLLEIRKGEFEVRDVQNIADILVDPEGSAE
CCEEECCCHHHHCCCEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHEECCCCCCH
RRDHWDKTGYALLVAVILHVLYAEEDKSLAGCARFLAHPERTLFQTLDRMRTAHHLVGPD
HHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC
GRGRVHPKVAEGARAMLNKSENERSGVLSTTLTLLEVYTDPVIARLTSASDWGVMDLVAA
CCCCCCCHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHH
ARPVSLYLVVPPSDISRTRPLMRLILNQIGRRLTEELPGSSRRELLLMLDEFPALGRLDF
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEECCCCCCCCHHH
FETALAFLAGYRIRAFLITQSLNQIEKAYGPNNSILDNCHVRVRAASARG
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCC
>Mature Secondary Structure 
SPSKILIGQFFIVLTIILAATWSATQWAAHSLGYQSALGPPWFVVNDIPVYIPWRLYQW
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHCCCCCEEEEECCCEEECHHHHHH
WYAYEAYAPGVFARAGAIAASGGLLGILAAVIGSLWRARWERHVTTYGSARWANRRDIRK
HHHHHHHCCCHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
AGLLRNDGVLLGLWQGRYLRHGGPEHVLAVAPTRSGKGVGLVIPTLLSWTGSCVVHDIKG
HCCEECCCEEEEEECCCHHHCCCCCCEEEEECCCCCCCCEEHHHHHHCCCCCEEEEECCC
ENWQLTSGWRSTLGPCIRFDPTDRESLRYNPLLEIRKGEFEVRDVQNIADILVDPEGSAE
CCEEECCCHHHHCCCEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHEECCCCCCH
RRDHWDKTGYALLVAVILHVLYAEEDKSLAGCARFLAHPERTLFQTLDRMRTAHHLVGPD
HHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC
GRGRVHPKVAEGARAMLNKSENERSGVLSTTLTLLEVYTDPVIARLTSASDWGVMDLVAA
CCCCCCCHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHH
ARPVSLYLVVPPSDISRTRPLMRLILNQIGRRLTEELPGSSRRELLLMLDEFPALGRLDF
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEECCCCCCCCHHH
FETALAFLAGYRIRAFLITQSLNQIEKAYGPNNSILDNCHVRVRAASARG
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1665997; 8021214; 11976307 [H]