| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798207
Identifier: 114798207
GI number: 114798207
Start: 2899705
End: 2900592
Strand: Reverse
Name: 114798207
Synonym: HNE_2739
Alternate gene names: NA
Gene position: 2900592-2899705 (Counterclockwise)
Preceding gene: 114798919
Following gene: 114798091
Centisome position: 78.29
GC content: 62.5
Gene sequence:
>888_bases ATGCGTCATGACGTGATCGTCATAGGGGGCAGCTACGCCGGTATGGCCGCTGCTCTCCAGCTGCTGCGTGCGCGCCGGAA AGTGCTGGTGATTGATGCCGGCCAGCGGCGAAACCGGTTTGCAGGCAGCTCCCACGGCTTTCTCGGACAGGACGGCGCCG ACCCCGCCGCGATTGCCACAGAGGCCCGCAAACAGCTTGAAGCCTATCCCACGCTGGACTGGCTGGAAGATGTAGCGCTT GAGGCGGCTAAACTTGAGGATGATGGCGGCTTCCATGTCCGCAGCTGGAGCGGCGGCCGGTATCAAGCCGCGCGCCTGAT TTTCGCAACAGGGGTCAGCGATACATTGCCGGAAATTGAAGGCCTGGCAGAGCGCTGGGGGCAGCATGTGTTCCACTGCC CCTATTGCCACGGTTATGAGCTTGCGCAGGGCAAGATCGGCGTCATTGCGACCAGTCCCATGTCACTCCACCAGGCGGAA TTCCTGACGGAATGGGGCGATGTCACCTTGTTCCTGAACGGCGTATTTGAGCCGGACGGCGCGGCGCGCGCCAGGCTGGA AGCCCGCCGTGTGCGGATCGAGGCGGCGCCCATCATCCGGATCGAAGGCCGGGCAGAGGTTGTGATCGAAGGCGGGCAAC GCTTAACGTTTGCCGGCCTCTTCACAGCCTCGCGAAATGCGCCGGCAACGCCCATTGCGCAGCAACTCGGTTGCGCCCTC GAAGAAACACCTTTCGGAACGCAGATCCGGCGAAATGACATGAAGGAGACAAGCGTGCCTGGCACGTATGCGTGCGGGGA CGCCGCGCATGTGCCTCACTCGGTTTCATTGGCTGTCGGTGACGGTGCCTTGACGGGCATAATGGTTCACAGGTCGCTTC TGCTCTAG
Upstream 100 bases:
>100_bases GCGCTGCTGCTCGAGCGGTTCGCGTCGGTGACGCTTGCTGATCTCGCGGCGGAATTCACGCGGCGGTTCAAGGATTACAA ACTCCAAAAAGGATAGACCC
Downstream 100 bases:
>100_bases GGGCGGCGCTGGCGCATCGGGGTCGATGGTCGGAGTGAGAGGATTCGAACCTCCGGCCCCTAGCTCCCGAAGCTAGTGCT CTACCAGGCTGAGCTACACT
Product: pyridine nucleotide-disulfide oxidoreductase
Products: NA
Alternate protein names: Thioredoxin Reductase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Oxidoreductase; Reductase; Pyridine Nucleotide-Disulphide Oxidoreductase Class II; Thioredoxin-Disulfide Reductase; FAD Dependent Oxidoreductase; Pyridine Nucleotide-Disulphide Oxidoreductase; Pyridine Nucleotide-Disulfide Oxidoreductase; Thioredoxin Reductase Protein; Pyridine Nucleotide-Disulfide Oxidoreductase Domain Protein; Methyltransferase Type; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Alkyl Hydroperoxide Reductase; Pyridine Nucleotide-Disulfide Oxidoreductase Family Protein; NADPH Dependent Thioredoxin Reductase; Oxidoreductase Protein; Methyltransferase; Disulfide Oxidoreductase; Alkyl Hydroperoxide Reductase Large Subunit
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MRHDVIVIGGSYAGMAAALQLLRARRKVLVIDAGQRRNRFAGSSHGFLGQDGADPAAIATEARKQLEAYPTLDWLEDVAL EAAKLEDDGGFHVRSWSGGRYQAARLIFATGVSDTLPEIEGLAERWGQHVFHCPYCHGYELAQGKIGVIATSPMSLHQAE FLTEWGDVTLFLNGVFEPDGAARARLEARRVRIEAAPIIRIEGRAEVVIEGGQRLTFAGLFTASRNAPATPIAQQLGCAL EETPFGTQIRRNDMKETSVPGTYACGDAAHVPHSVSLAVGDGALTGIMVHRSLLL
Sequences:
>Translated_295_residues MRHDVIVIGGSYAGMAAALQLLRARRKVLVIDAGQRRNRFAGSSHGFLGQDGADPAAIATEARKQLEAYPTLDWLEDVAL EAAKLEDDGGFHVRSWSGGRYQAARLIFATGVSDTLPEIEGLAERWGQHVFHCPYCHGYELAQGKIGVIATSPMSLHQAE FLTEWGDVTLFLNGVFEPDGAARARLEARRVRIEAAPIIRIEGRAEVVIEGGQRLTFAGLFTASRNAPATPIAQQLGCAL EETPFGTQIRRNDMKETSVPGTYACGDAAHVPHSVSLAVGDGALTGIMVHRSLLL >Mature_295_residues MRHDVIVIGGSYAGMAAALQLLRARRKVLVIDAGQRRNRFAGSSHGFLGQDGADPAAIATEARKQLEAYPTLDWLEDVAL EAAKLEDDGGFHVRSWSGGRYQAARLIFATGVSDTLPEIEGLAERWGQHVFHCPYCHGYELAQGKIGVIATSPMSLHQAE FLTEWGDVTLFLNGVFEPDGAARARLEARRVRIEAAPIIRIEGRAEVVIEGGQRLTFAGLFTASRNAPATPIAQQLGCAL EETPFGTQIRRNDMKETSVPGTYACGDAAHVPHSVSLAVGDGALTGIMVHRSLLL
Specific function: Unknown
COG id: COG0492
COG function: function code O; Thioredoxin reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31795; Mature: 31795
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHDVIVIGGSYAGMAAALQLLRARRKVLVIDAGQRRNRFAGSSHGFLGQDGADPAAIAT CCCCEEEECCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHH EARKQLEAYPTLDWLEDVALEAAKLEDDGGFHVRSWSGGRYQAARLIFATGVSDTLPEIE HHHHHHHHCCCHHHHHHHHHHHHEECCCCCEEEEECCCCCEEEEEEEEECCCCHHHHHHH GLAERWGQHVFHCPYCHGYELAQGKIGVIATSPMSLHQAEFLTEWGDVTLFLNGVFEPDG HHHHHHCCCEEECCCCCCCEECCCCEEEEEECCCHHHHHHHHHHCCCEEEEEEEEECCCC AARARLEARRVRIEAAPIIRIEGRAEVVIEGGQRLTFAGLFTASRNAPATPIAQQLGCAL HHHHHHHHHHEEEEECCEEEECCCEEEEEECCCEEEEEEEEEECCCCCCCHHHHHHCCCC EETPFGTQIRRNDMKETSVPGTYACGDAAHVPHSVSLAVGDGALTGIMVHRSLLL CCCCCCCHHHHCCCHHCCCCCCEECCCCCCCCCEEEEEECCCHHHHHHHHHHHCC >Mature Secondary Structure MRHDVIVIGGSYAGMAAALQLLRARRKVLVIDAGQRRNRFAGSSHGFLGQDGADPAAIAT CCCCEEEECCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHH EARKQLEAYPTLDWLEDVALEAAKLEDDGGFHVRSWSGGRYQAARLIFATGVSDTLPEIE HHHHHHHHCCCHHHHHHHHHHHHEECCCCCEEEEECCCCCEEEEEEEEECCCCHHHHHHH GLAERWGQHVFHCPYCHGYELAQGKIGVIATSPMSLHQAEFLTEWGDVTLFLNGVFEPDG HHHHHHCCCEEECCCCCCCEECCCCEEEEEECCCHHHHHHHHHHCCCEEEEEEEEECCCC AARARLEARRVRIEAAPIIRIEGRAEVVIEGGQRLTFAGLFTASRNAPATPIAQQLGCAL HHHHHHHHHHEEEEECCEEEECCCEEEEEECCCEEEEEEEEEECCCCCCCHHHHHHCCCC EETPFGTQIRRNDMKETSVPGTYACGDAAHVPHSVSLAVGDGALTGIMVHRSLLL CCCCCCCHHHHCCCHHCCCCCCEECCCCCCCCCEEEEEECCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA