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The map label for this gene is rpmF

Identifier: 114798161

GI number: 114798161

Start: 2054634

End: 2054819

Strand: Reverse

Name: rpmF

Synonym: HNE_1981

Alternate gene names: 114798161

Gene position: 2054819-2054634 (Counterclockwise)

Preceding gene: 114797379

Following gene: 114797139

Centisome position: 55.46

GC content: 59.68

Gene sequence:

>186_bases
ATGGCAGTCCCAAAGAGTAAGAAATCGAAATCGCGCACGCGCATGCGCCGCTCGCACGACCGTCTGGCGATGAACACATA
CATCGAAGACGCGACCTCCGGCGAACTCCGCCGTCCGCACCACATCGACCTGAAAACGGGCATGTACCGCGGTAAGCAGA
TCCTCGAGCCGACCGACGACATCTAG

Upstream 100 bases:

>100_bases
CCGTTTCGCGCTTGCCATCCCCGTTAGGCTGCGTTAACAGGCGCCCTTTCCCGCGATCCCTCTGGGACAGCGGACCCACC
AGATTCCGGAAGCAAGTGCC

Downstream 100 bases:

>100_bases
TTCCCCGGTTGCGCTCAGCAGCGCACCAGCCTAAGGGTTCCGGCGCCTCCTGCACCTTGCAGGGGGCGCTTTTCATTTGC
ACGACATATGCCTTTAAGGG

Product: 50S ribosomal protein L32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 61; Mature: 60

Protein sequence:

>61_residues
MAVPKSKKSKSRTRMRRSHDRLAMNTYIEDATSGELRRPHHIDLKTGMYRGKQILEPTDDI

Sequences:

>Translated_61_residues
MAVPKSKKSKSRTRMRRSHDRLAMNTYIEDATSGELRRPHHIDLKTGMYRGKQILEPTDDI
>Mature_60_residues
AVPKSKKSKSRTRMRRSHDRLAMNTYIEDATSGELRRPHHIDLKTGMYRGKQILEPTDDI

Specific function: Unknown

COG id: COG0333

COG function: function code J; Ribosomal protein L32

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL32_HYPNA (Q0C0R2)

Other databases:

- EMBL:   CP000158
- RefSeq:   YP_760681.1
- ProteinModelPortal:   Q0C0R2
- SMR:   Q0C0R2
- STRING:   Q0C0R2
- GeneID:   4287650
- GenomeReviews:   CP000158_GR
- KEGG:   hne:HNE_1981
- NMPDR:   fig|228405.5.peg.1908
- TIGR:   HNE_1981
- eggNOG:   COG0333
- HOGENOM:   HBG728381
- OMA:   LKAPTYI
- BioCyc:   HNEP81032:HNE_1981-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00340
- InterPro:   IPR002677
- InterPro:   IPR011332
- TIGRFAMs:   TIGR01031

Pfam domain/function: PF01783 Ribosomal_L32p; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 7125; Mature: 6994

Theoretical pI: Translated: 10.84; Mature: 10.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVPKSKKSKSRTRMRRSHDRLAMNTYIEDATSGELRRPHHIDLKTGMYRGKQILEPTDD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
I
C
>Mature Secondary Structure 
AVPKSKKSKSRTRMRRSHDRLAMNTYIEDATSGELRRPHHIDLKTGMYRGKQILEPTDD
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
I
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA