| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798088
Identifier: 114798088
GI number: 114798088
Start: 3647863
End: 3648510
Strand: Reverse
Name: 114798088
Synonym: HNE_3513
Alternate gene names: NA
Gene position: 3648510-3647863 (Counterclockwise)
Preceding gene: 114799040
Following gene: 114799300
Centisome position: 98.47
GC content: 64.51
Gene sequence:
>648_bases ATGCGACTGCCCGCCCTGTTCGTCCTGCTACTGGCTGCGTTTGCGGCGCCTTCGGCGCATGCAGACGGCCCGGTTCTGGT TGAACTTTTTGCCTCCAAGAACTGCCGGTCCTGCCCGGCGGCCTACCGGGCGATGGACGAGCTGGAAGCGCAGCGCGATG ACGTGCTGGTGCTGACCTGGCCGGTCGATTACTGGGACTATCTCGGCAGCAAGGAAAAGATGGCCTTGCCGGAGTCGAAA GACCGCCAGCGCGGGTATGTCGAGCGGTTCTCCCTGCGCGGGCCCTATACGCCGCAGGCCGTCTTCAACGGCGCCGAGCA GGCGCCCGGCAACAAGGCAAGCAAGGTAGGCGCGGCGCTGGGAAAGGCGATGACCCTTCCTGAATCCGGCATCCGCCTTG TCAGCAAGACCGGCAAGGTCTCGCTGAAAGGGGAAACCGCCAGCCTCACTGATCTCTGGTGGGTCACCTATCTGACCGAC GAAGACAATCCCACCAAGATGCCAAATCCCGTGACCTCTGCCCGTCAGATCGGCCCCTGGCTCGGCGGCCGCGCTGACAT CGACCTGCCGGCCTGCGAATCGGGCTGCATGCTGATCGTTCAGGAAGCCGGCTTTGGCCCGGTCCTCACCGTCATGGACG TGCGCTGA
Upstream 100 bases:
>100_bases TGGCCCGCCGCAGGATCAGCCCGCGGCGGGCTTTTTACAGCCTCTCACGCGGCTGTGACTGTCGGCATGTTGCCCCAGAG CATATAAGCGGCCTGTGATG
Downstream 100 bases:
>100_bases TCACTCTTCGGGCGTTTCGCCGTCCGGTGTGACATCTTCAGGCGGGCGCGCAATCTCCGACACGGCCGGGGCAAAATCCA TCCAGTCGATCTCTGACACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MRLPALFVLLLAAFAAPSAHADGPVLVELFASKNCRSCPAAYRAMDELEAQRDDVLVLTWPVDYWDYLGSKEKMALPESK DRQRGYVERFSLRGPYTPQAVFNGAEQAPGNKASKVGAALGKAMTLPESGIRLVSKTGKVSLKGETASLTDLWWVTYLTD EDNPTKMPNPVTSARQIGPWLGGRADIDLPACESGCMLIVQEAGFGPVLTVMDVR
Sequences:
>Translated_215_residues MRLPALFVLLLAAFAAPSAHADGPVLVELFASKNCRSCPAAYRAMDELEAQRDDVLVLTWPVDYWDYLGSKEKMALPESK DRQRGYVERFSLRGPYTPQAVFNGAEQAPGNKASKVGAALGKAMTLPESGIRLVSKTGKVSLKGETASLTDLWWVTYLTD EDNPTKMPNPVTSARQIGPWLGGRADIDLPACESGCMLIVQEAGFGPVLTVMDVR >Mature_215_residues MRLPALFVLLLAAFAAPSAHADGPVLVELFASKNCRSCPAAYRAMDELEAQRDDVLVLTWPVDYWDYLGSKEKMALPESK DRQRGYVERFSLRGPYTPQAVFNGAEQAPGNKASKVGAALGKAMTLPESGIRLVSKTGKVSLKGETASLTDLWWVTYLTD EDNPTKMPNPVTSARQIGPWLGGRADIDLPACESGCMLIVQEAGFGPVLTVMDVR
Specific function: Unknown
COG id: COG5429
COG function: function code S; Uncharacterized secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23347; Mature: 23347
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLPALFVLLLAAFAAPSAHADGPVLVELFASKNCRSCPAAYRAMDELEAQRDDVLVLTW CCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEE PVDYWDYLGSKEKMALPESKDRQRGYVERFSLRGPYTPQAVFNGAEQAPGNKASKVGAAL CCHHHHHCCCCCCCCCCCCCCHHCCHHHHHCCCCCCCHHHHHCCHHCCCCCHHHHHHHHH GKAMTLPESGIRLVSKTGKVSLKGETASLTDLWWVTYLTDEDNPTKMPNPVTSARQIGPW HHHHCCCHHCCEEEECCCEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCHHHHHHCCC LGGRADIDLPACESGCMLIVQEAGFGPVLTVMDVR CCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECC >Mature Secondary Structure MRLPALFVLLLAAFAAPSAHADGPVLVELFASKNCRSCPAAYRAMDELEAQRDDVLVLTW CCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEE PVDYWDYLGSKEKMALPESKDRQRGYVERFSLRGPYTPQAVFNGAEQAPGNKASKVGAAL CCHHHHHCCCCCCCCCCCCCCHHCCHHHHHCCCCCCCHHHHHCCHHCCCCCHHHHHHHHH GKAMTLPESGIRLVSKTGKVSLKGETASLTDLWWVTYLTDEDNPTKMPNPVTSARQIGPW HHHHCCCHHCCEEEECCCEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCHHHHHHCCC LGGRADIDLPACESGCMLIVQEAGFGPVLTVMDVR CCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA