| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798079
Identifier: 114798079
GI number: 114798079
Start: 456652
End: 457314
Strand: Reverse
Name: 114798079
Synonym: HNE_0462
Alternate gene names: NA
Gene position: 457314-456652 (Counterclockwise)
Preceding gene: 114798476
Following gene: 114799992
Centisome position: 12.34
GC content: 59.73
Gene sequence:
>663_bases ATGTCTGAACTCGTGTCGGTCCTAACCAACGGGCAACCTCAGCTGATTGGCCCGGCACTGGGCGCATTGTTGCTCACATT CTGCGCGATCTGGTTCCTGAACGGACGGATATGGGCGTTTGTCTATGTGGCGTTGATTCCTTTTCTCAACTGGTCGTTCG GCGTGATTCCCGAAGCGCAGATCGTGGCGCCCGGCGGCGACTATGCGCCCGGCATCGCGCTGCACCCGATGACGATGGTG ACGGGCATGGTGTTCGTGATCCGCGACTTCGTGCAGCGCGAGATGGGACACAAGGTGCTGATCCTGATGGCGATCGCGGT GGCCTGGTCATTCTTCTATTCCTGGCCGGTGATTGCGCTGGCCAGCGGGATTGCGTTTGCCGTCTCGGAGATGGTGGACT GGATGGTCTACACCTTCACGAAATACCGGCTTTCAACGCGCATCCTGATTTCCAGCGCGCTGGCAACGCCGGTGGATACG ACCGTGTTTCTCTATGGCGCCGACCTTGCCAAACAGATGGAGCTGGGCATGGAGCCGGGCAACTCACTGCACCCGCTCAA CTGGATCGTGTTCGTGATCGGCAAGATGGTGGGCGCGGTGATCGTTTCATATGTGATCCGCCGGCGCGAGGATAAGGGGC TGATCTCGCCGCATGAGGCGTAG
Upstream 100 bases:
>100_bases TCCCATTTGCGCGCTTCCTCGCTCCGCAGGCATGGTTTAAGCAAGCACGCAACGCAGCGGCAACTGCATTAAAATGGGAC AGCGGGGGGAACGCTCATAA
Downstream 100 bases:
>100_bases TTGAGATTGCTCGGTGCTGTTCGCGAGCCAAGGCTCGCGGCACCTGCGCCTGCGCGTTGCTTGTGGGGGTGGCAGCCGGG AGGTTGGAGGCCCCGTCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MSELVSVLTNGQPQLIGPALGALLLTFCAIWFLNGRIWAFVYVALIPFLNWSFGVIPEAQIVAPGGDYAPGIALHPMTMV TGMVFVIRDFVQREMGHKVLILMAIAVAWSFFYSWPVIALASGIAFAVSEMVDWMVYTFTKYRLSTRILISSALATPVDT TVFLYGADLAKQMELGMEPGNSLHPLNWIVFVIGKMVGAVIVSYVIRRREDKGLISPHEA
Sequences:
>Translated_220_residues MSELVSVLTNGQPQLIGPALGALLLTFCAIWFLNGRIWAFVYVALIPFLNWSFGVIPEAQIVAPGGDYAPGIALHPMTMV TGMVFVIRDFVQREMGHKVLILMAIAVAWSFFYSWPVIALASGIAFAVSEMVDWMVYTFTKYRLSTRILISSALATPVDT TVFLYGADLAKQMELGMEPGNSLHPLNWIVFVIGKMVGAVIVSYVIRRREDKGLISPHEA >Mature_219_residues SELVSVLTNGQPQLIGPALGALLLTFCAIWFLNGRIWAFVYVALIPFLNWSFGVIPEAQIVAPGGDYAPGIALHPMTMVT GMVFVIRDFVQREMGHKVLILMAIAVAWSFFYSWPVIALASGIAFAVSEMVDWMVYTFTKYRLSTRILISSALATPVDTT VFLYGADLAKQMELGMEPGNSLHPLNWIVFVIGKMVGAVIVSYVIRRREDKGLISPHEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24271; Mature: 24140
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELVSVLTNGQPQLIGPALGALLLTFCAIWFLNGRIWAFVYVALIPFLNWSFGVIPEAQ CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCE IVAPGGDYAPGIALHPMTMVTGMVFVIRDFVQREMGHKVLILMAIAVAWSFFYSWPVIAL EECCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH ASGIAFAVSEMVDWMVYTFTKYRLSTRILISSALATPVDTTVFLYGADLAKQMELGMEPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHCCCCC NSLHPLNWIVFVIGKMVGAVIVSYVIRRREDKGLISPHEA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SELVSVLTNGQPQLIGPALGALLLTFCAIWFLNGRIWAFVYVALIPFLNWSFGVIPEAQ HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCE IVAPGGDYAPGIALHPMTMVTGMVFVIRDFVQREMGHKVLILMAIAVAWSFFYSWPVIAL EECCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH ASGIAFAVSEMVDWMVYTFTKYRLSTRILISSALATPVDTTVFLYGADLAKQMELGMEPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHCCCCC NSLHPLNWIVFVIGKMVGAVIVSYVIRRREDKGLISPHEA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA