| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798057
Identifier: 114798057
GI number: 114798057
Start: 1966085
End: 1967077
Strand: Direct
Name: 114798057
Synonym: HNE_1899
Alternate gene names: NA
Gene position: 1966085-1967077 (Clockwise)
Preceding gene: 114799649
Following gene: 114798981
Centisome position: 53.07
GC content: 60.02
Gene sequence:
>993_bases ATGGCAAAAGACGTGACTTCCGGCTACGAGCCGCTGACCTCGATCGAGGCAATCACCGCAGGGCTCGGCACCGCCGGCTA TATCTCCACAGCGCAGATCTCGACGGCGGTTTATCTCGCCCATGGGCTGCGCAAGCCGATCCTGATCGAAGGCCCGGCGG GCGTGGGCAAAACCGATCTTGCCGCCTCGCTTGGCCGCTGGCTCGACCTGCCGATCATCCGCCTGCAGTGCTATGAAGGC CTCGATGAAGGCAAGGCGCTGTATGAATGGAAATACGGCAAGCAACTGCTCTACACGCAGATCCTGAAAGAGAAGCTCAA CGAGCTGATCGGCGAGGCCGACAATCTCAGCAAGTCACTGGGCAAGCTCGCCGACTTTGAAGACCTGTTCTTCTCGCCAC AATTCCTGGAAGCGCGCCCCCTGCTCCACGCCATGCAGCAGGACAGTGGCTCGATCCTGCTGATCGACGAAATCGACAAG TCAGATGAAGCGTTCGAGGCGTTCCTGCTGGAAGTGCTCTCTGATTATCAGGTCTCCGTGCCCGAAATCGGCACCATCCG GGCGAAAGTTCCGCCCATCGTGATCCTGACCTCGAACAATGTCCGCGAGCTGGGCGACGCACTGAAGCGGCGCTGCTTGC ACTTGCATATCGGCTTCCCCGATCATGTCCGGGAACAGAAGATTGTGCGGGCACGTGTGGACGGAATTTCGGATACGCTG CTGAACCAGCTTGTGCGGTTTGTTCAGTCCGTTCGCGAGGCCGACATCAAGAAGCGGCCCTCCATCGCCGAGACGGTGGA CTGGGCACGCACGCTGCTGCTGCTCCATTCCAGCAGCCTTGATGAACAGTTCGTGCGCGATACGCTCAACGTGCTGCTCA AGCATGAGAGCGACATTGCCGCGATCTCTCCGCAGATCCCCAAGATGGTGCGCGAAGCGATTGGCACGGATTCGGGCGGG CGGACGGCTTCCGGCTACCCGGACATCGGATAA
Upstream 100 bases:
>100_bases CTCGCCAGTCCGCGCGCGGCTTAGCTCCCGGACGGGCGCCCTGCGAATTGCCCTAGCGTGAGTGCTTGCCACTCTTCCCG GCCCCCCCTACCCCTTAAGA
Downstream 100 bases:
>100_bases GGCGGCGCGCCGATGGAGCGCCAGATTTCCAATTTCATCCGGGCCCTGAGGTCTGCTGATGTGAAGGTCTCGACCGGCGA AGCTTTGGACGCGGCGCGCA
Product: AAA family ATPase
Products: NA
Alternate protein names: ATPase AAA Family; AAA ATPase Central Domain Protein; AAA_5 ATPase; MoxR-Like ATPase; AAA Family ATPase; AAA ATPase; ATPase AAA Family Protein; ATPase Associated With Various Cellular Activities; ATPase Central Domain-Containing Protein; Carbon Monoxide Dehydrogenase D Protein; Oxidoreductase; MoxR Family ATPase; ATP-Dependent Protease; ATPase Protein; Aaa ATPase; Chaperone ClpB; Oligopeptide ABC Transporter; Membrane Oxidoreductase; AAA ATPase Central RegionATPase; Carbon Monoxide Dehydrogenase CoxD Accessory Protein; ATP-Dependent Protease LA Protein; CoxD-Like Protein; ATP-Dependent Protease Subunit; ATPase Associated With Various Cellular; Carbon Monoxide Dehydrogenase Accesory Protein; ClpA/ClpB Family Protein; ATPase Aaa Family; AAA ATPase Family Protein; MoxR-Like ATPase CoxD
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MAKDVTSGYEPLTSIEAITAGLGTAGYISTAQISTAVYLAHGLRKPILIEGPAGVGKTDLAASLGRWLDLPIIRLQCYEG LDEGKALYEWKYGKQLLYTQILKEKLNELIGEADNLSKSLGKLADFEDLFFSPQFLEARPLLHAMQQDSGSILLIDEIDK SDEAFEAFLLEVLSDYQVSVPEIGTIRAKVPPIVILTSNNVRELGDALKRRCLHLHIGFPDHVREQKIVRARVDGISDTL LNQLVRFVQSVREADIKKRPSIAETVDWARTLLLLHSSSLDEQFVRDTLNVLLKHESDIAAISPQIPKMVREAIGTDSGG RTASGYPDIG
Sequences:
>Translated_330_residues MAKDVTSGYEPLTSIEAITAGLGTAGYISTAQISTAVYLAHGLRKPILIEGPAGVGKTDLAASLGRWLDLPIIRLQCYEG LDEGKALYEWKYGKQLLYTQILKEKLNELIGEADNLSKSLGKLADFEDLFFSPQFLEARPLLHAMQQDSGSILLIDEIDK SDEAFEAFLLEVLSDYQVSVPEIGTIRAKVPPIVILTSNNVRELGDALKRRCLHLHIGFPDHVREQKIVRARVDGISDTL LNQLVRFVQSVREADIKKRPSIAETVDWARTLLLLHSSSLDEQFVRDTLNVLLKHESDIAAISPQIPKMVREAIGTDSGG RTASGYPDIG >Mature_329_residues AKDVTSGYEPLTSIEAITAGLGTAGYISTAQISTAVYLAHGLRKPILIEGPAGVGKTDLAASLGRWLDLPIIRLQCYEGL DEGKALYEWKYGKQLLYTQILKEKLNELIGEADNLSKSLGKLADFEDLFFSPQFLEARPLLHAMQQDSGSILLIDEIDKS DEAFEAFLLEVLSDYQVSVPEIGTIRAKVPPIVILTSNNVRELGDALKRRCLHLHIGFPDHVREQKIVRARVDGISDTLL NQLVRFVQSVREADIKKRPSIAETVDWARTLLLLHSSSLDEQFVRDTLNVLLKHESDIAAISPQIPKMVREAIGTDSGGR TASGYPDIG
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36402; Mature: 36271
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKDVTSGYEPLTSIEAITAGLGTAGYISTAQISTAVYLAHGLRKPILIEGPAGVGKTDL CCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHH AASLGRWLDLPIIRLQCYEGLDEGKALYEWKYGKQLLYTQILKEKLNELIGEADNLSKSL HHHHHHHHCCHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH GKLADFEDLFFSPQFLEARPLLHAMQQDSGSILLIDEIDKSDEAFEAFLLEVLSDYQVSV HHHCCHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCC PEIGTIRAKVPPIVILTSNNVRELGDALKRRCLHLHIGFPDHVREQKIVRARVDGISDTL CCCCEEEECCCCEEEEECCCHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHCCHHHHH LNQLVRFVQSVREADIKKRPSIAETVDWARTLLLLHSSSLDEQFVRDTLNVLLKHESDIA HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHH AISPQIPKMVREAIGTDSGGRTASGYPDIG HCCCHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure AKDVTSGYEPLTSIEAITAGLGTAGYISTAQISTAVYLAHGLRKPILIEGPAGVGKTDL CCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHH AASLGRWLDLPIIRLQCYEGLDEGKALYEWKYGKQLLYTQILKEKLNELIGEADNLSKSL HHHHHHHHCCHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH GKLADFEDLFFSPQFLEARPLLHAMQQDSGSILLIDEIDKSDEAFEAFLLEVLSDYQVSV HHHCCHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCC PEIGTIRAKVPPIVILTSNNVRELGDALKRRCLHLHIGFPDHVREQKIVRARVDGISDTL CCCCEEEECCCCEEEEECCCHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHCCHHHHH LNQLVRFVQSVREADIKKRPSIAETVDWARTLLLLHSSSLDEQFVRDTLNVLLKHESDIA HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHH AISPQIPKMVREAIGTDSGGRTASGYPDIG HCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA