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The map label for this gene is ybaA [H]

Identifier: 114798018

GI number: 114798018

Start: 1028586

End: 1029302

Strand: Direct

Name: ybaA [H]

Synonym: HNE_1019

Alternate gene names: 114798018

Gene position: 1028586-1029302 (Clockwise)

Preceding gene: 114797829

Following gene: 114798934

Centisome position: 27.76

GC content: 59.83

Gene sequence:

>717_bases
GTGACATATGTAAGTGGATTTCTTCTGGCCGTGCCGACGGCCAACAAGGACGCCTATCGCAAGCAGGCCGAAGAGGCCTG
GCCGATGTTCAAGGGCTATGGCGCGGTGGCTATGGTGGAAGGCTGGGGGGATGACGTGCCCCAGGGCAAGGTCAACTGCA
TCAACTCGGCCGTGAAGCGGAAGCCGGACGAGACCGCCATGTTCTCATGGGTGGTCTGGCCGGACAAGAAGACCAGCGAT
GAAGCCGAGCAGAAGATGATGGCCGACATGGAGGGCAAGGAATTTCCAGAAATGCCGTTTGATGGCAAGCGGATGATTGT
CGGCGGCTTTGAAACCATCGTGGGCGATGCAACGGTCAAGACCGGCTATATCGACGGGACGGTTATCCCGGTGCCGGCGG
ACAAGCGGGGCGCCTATACCGCCGCCTCACACAAGATGGCGGAGCTGTTCCAGGAGTTTGGCGCCATTTCGGTCGTCGAT
GCCTGGGGGGATAACCTGCCTGAGGGCAAGGTCAATGATTTCCACACTGCCACCCTGCGCAAGCCCGAAGAAGCGGTGGT
GTTCTCCTGGATCAACTGGAAGGACAAGGCCACGCGCGATGCGGGCTGGGAAAAGATCATGGAAGACCCGCGCATGCAGG
AGTTTGGTCCGCATACGGTCGGGGCCGACATGGGCCGCATGATCTTCGGCAGCTTTGTTCCCCTTGTGGATGTCTGA

Upstream 100 bases:

>100_bases
TTGCGGCGCCTGTCTGGCCGCCCAAATCGCCCGAGGAAATGGAAGCGGCGGCCAAGGCCGCCATGGCGCAGATGGCGCAA
TCATAAAAGGAGTGATGGTA

Downstream 100 bases:

>100_bases
ACGCCAGCCGGGCATCTTTCCGTGAACTCTGCCTTGGGGCGCCTTTGCGGGCGCCCCTTTTTTTTCGGAAAGTGTCGGCG
GCCGGGAAGGCGCGCGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MTYVSGFLLAVPTANKDAYRKQAEEAWPMFKGYGAVAMVEGWGDDVPQGKVNCINSAVKRKPDETAMFSWVVWPDKKTSD
EAEQKMMADMEGKEFPEMPFDGKRMIVGGFETIVGDATVKTGYIDGTVIPVPADKRGAYTAASHKMAELFQEFGAISVVD
AWGDNLPEGKVNDFHTATLRKPEEAVVFSWINWKDKATRDAGWEKIMEDPRMQEFGPHTVGADMGRMIFGSFVPLVDV

Sequences:

>Translated_238_residues
MTYVSGFLLAVPTANKDAYRKQAEEAWPMFKGYGAVAMVEGWGDDVPQGKVNCINSAVKRKPDETAMFSWVVWPDKKTSD
EAEQKMMADMEGKEFPEMPFDGKRMIVGGFETIVGDATVKTGYIDGTVIPVPADKRGAYTAASHKMAELFQEFGAISVVD
AWGDNLPEGKVNDFHTATLRKPEEAVVFSWINWKDKATRDAGWEKIMEDPRMQEFGPHTVGADMGRMIFGSFVPLVDV
>Mature_237_residues
TYVSGFLLAVPTANKDAYRKQAEEAWPMFKGYGAVAMVEGWGDDVPQGKVNCINSAVKRKPDETAMFSWVVWPDKKTSDE
AEQKMMADMEGKEFPEMPFDGKRMIVGGFETIVGDATVKTGYIDGTVIPVPADKRGAYTAASHKMAELFQEFGAISVVDA
WGDNLPEGKVNDFHTATLRKPEEAVVFSWINWKDKATRDAGWEKIMEDPRMQEFGPHTVGADMGRMIFGSFVPLVDV

Specific function: Unknown

COG id: COG5507

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786661, Length=115, Percent_Identity=54.7826086956522, Blast_Score=125, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009874 [H]

Pfam domain/function: PF07237 DUF1428 [H]

EC number: NA

Molecular weight: Translated: 26418; Mature: 26287

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYVSGFLLAVPTANKDAYRKQAEEAWPMFKGYGAVAMVEGWGDDVPQGKVNCINSAVKR
CCCCCCEEEEECCCCHHHHHHHHHHHCCHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHC
KPDETAMFSWVVWPDKKTSDEAEQKMMADMEGKEFPEMPFDGKRMIVGGFETIVGDATVK
CCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHHCCCEEE
TGYIDGTVIPVPADKRGAYTAASHKMAELFQEFGAISVVDAWGDNLPEGKVNDFHTATLR
ECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHCC
KPEEAVVFSWINWKDKATRDAGWEKIMEDPRMQEFGPHTVGADMGRMIFGSFVPLVDV
CCCCEEEEEEECCCCCCCHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHCCCHHCCC
>Mature Secondary Structure 
TYVSGFLLAVPTANKDAYRKQAEEAWPMFKGYGAVAMVEGWGDDVPQGKVNCINSAVKR
CCCCCEEEEECCCCHHHHHHHHHHHCCHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHC
KPDETAMFSWVVWPDKKTSDEAEQKMMADMEGKEFPEMPFDGKRMIVGGFETIVGDATVK
CCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHHCCCEEE
TGYIDGTVIPVPADKRGAYTAASHKMAELFQEFGAISVVDAWGDNLPEGKVNDFHTATLR
ECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHCC
KPEEAVVFSWINWKDKATRDAGWEKIMEDPRMQEFGPHTVGADMGRMIFGSFVPLVDV
CCCCEEEEEEECCCCCCCHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]