| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797967
Identifier: 114797967
GI number: 114797967
Start: 1210140
End: 1211444
Strand: Direct
Name: 114797967
Synonym: HNE_1193
Alternate gene names: NA
Gene position: 1210140-1211444 (Clockwise)
Preceding gene: 114797740
Following gene: 114799879
Centisome position: 32.66
GC content: 58.77
Gene sequence:
>1305_bases GTGAGAATGGTAAACAGCATGACTGATCTGAAACGCCTGAGCCTGACCAGCGTTGCCGTGTGCGCCGTTGCAGCTTCAGT GGCCAATGCACAAGGCTCCGATTACTACAGCCGTGACAAGTACACAGCCGTACTTGACCGCCCGCAGCCGGAGTTCGATC CCGAACCGGTTCGCCTTGGCACATTCAGGGTCAACTCCGCGGCCGAACTGGGTGTCTCATATACCGACAACGTTTATGTG ATCTCGGCCAACGAAGAGTCCGGCGCCATCGGACGGGCCGGCCTGCGGGCATCGGGTGACACCACCTGGAGCGTTCACTC GCTCGGCTTTGATGTTTCGGCCCGCCGCAACGAGTATTTTGACCAGGGCGACGAGTCCAATAACGACCTGCGCGCGCGTC TGCGCGGCCGTGTCGATGTTTCGCGCAGCTTCTCGATCGGTGGCTCGGTCTTTGTGGAAGACCGTGTTGAACCCCGTACC GACATTTCCAACATCTTCAGCTCTGACAAGCCGATCGGCGTGTCCGTTCAGGGCGCAACGGTTGATGTGAACTATGTGAA TGACCGGGTGCGCTGGACCAACGGTCTGGGCATTCGCAACGAAGACTATGAAAACGGCCGCCAGATCGGCACGGGTCTTC CGATTGATCAGAGCTACCGTGATCGCACGGTCCTGGATGGCCGCACGCGGGTTTCCTATGCCGTATCGCCTAACTTCGCC GTATTCGGCCAAGGCACCTATGAGCAGCGCGACTATGATGCAGAGCAGATTTTCGGCGGTCTGCCACGGTCGCGCGACTC TGCAGGATATACGGTTGCGGGCGGTGTGGACTTCGAACTCAACTCCCTGATCCGCGGCGATGTCGCCGTGGGCTACCTCA AGGAAACGAAGGATGATGATTTCTTCGAAGAAGTCAGCGGTCTGTCGTTTGATGGGCGCATTCAGTGGTTCCCCACACAG CTGACCACGCTGACATTCAACGGGAACCGCCGCGTCAGCGACACCGGCCTGTTTGAATCGCCCACGGCGATTGAAAGCCG GGCTGGCGTGCGTGTCGATCACGAGCTTCGCCGCAATATCGTCCTTTCTGCCAGAGCGGACTATCTGTCTTACGAGTTCG AGGAAATCGACCGGAAAGACGAGGGCACTGACCTGGAAGTTTCCGCGATCTACAAGATGAACCGCCGCGTGCATTTTGAT ACCTTCGTGACGCGCGCAGATCGCGACGTGTCGGGGGTCGATGTCTTCGGTGATCCTTCCTACGGCGTAACGACCATCGG CGTCGGCGTCACTCTCTTCCCGTAA
Upstream 100 bases:
>100_bases AAATCCGTTGACGTAAATCTGTTCAAAGTCCGCCTGGCGGGGTGGCGCTGAACTTGCAGGGAACCGCCAAAGACCGGGCC TAACCGGCCTCGCAATCAAA
Downstream 100 bases:
>100_bases CACCTGCTAATCCGGAGGCCTGCATCCTGCGGGCCTCCAACAGTTTTCCAGAGGCACTGCCTTGTCCAAGTCGTATACTG TAGAAATTCCATCCAATGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MRMVNSMTDLKRLSLTSVAVCAVAASVANAQGSDYYSRDKYTAVLDRPQPEFDPEPVRLGTFRVNSAAELGVSYTDNVYV ISANEESGAIGRAGLRASGDTTWSVHSLGFDVSARRNEYFDQGDESNNDLRARLRGRVDVSRSFSIGGSVFVEDRVEPRT DISNIFSSDKPIGVSVQGATVDVNYVNDRVRWTNGLGIRNEDYENGRQIGTGLPIDQSYRDRTVLDGRTRVSYAVSPNFA VFGQGTYEQRDYDAEQIFGGLPRSRDSAGYTVAGGVDFELNSLIRGDVAVGYLKETKDDDFFEEVSGLSFDGRIQWFPTQ LTTLTFNGNRRVSDTGLFESPTAIESRAGVRVDHELRRNIVLSARADYLSYEFEEIDRKDEGTDLEVSAIYKMNRRVHFD TFVTRADRDVSGVDVFGDPSYGVTTIGVGVTLFP
Sequences:
>Translated_434_residues MRMVNSMTDLKRLSLTSVAVCAVAASVANAQGSDYYSRDKYTAVLDRPQPEFDPEPVRLGTFRVNSAAELGVSYTDNVYV ISANEESGAIGRAGLRASGDTTWSVHSLGFDVSARRNEYFDQGDESNNDLRARLRGRVDVSRSFSIGGSVFVEDRVEPRT DISNIFSSDKPIGVSVQGATVDVNYVNDRVRWTNGLGIRNEDYENGRQIGTGLPIDQSYRDRTVLDGRTRVSYAVSPNFA VFGQGTYEQRDYDAEQIFGGLPRSRDSAGYTVAGGVDFELNSLIRGDVAVGYLKETKDDDFFEEVSGLSFDGRIQWFPTQ LTTLTFNGNRRVSDTGLFESPTAIESRAGVRVDHELRRNIVLSARADYLSYEFEEIDRKDEGTDLEVSAIYKMNRRVHFD TFVTRADRDVSGVDVFGDPSYGVTTIGVGVTLFP >Mature_434_residues MRMVNSMTDLKRLSLTSVAVCAVAASVANAQGSDYYSRDKYTAVLDRPQPEFDPEPVRLGTFRVNSAAELGVSYTDNVYV ISANEESGAIGRAGLRASGDTTWSVHSLGFDVSARRNEYFDQGDESNNDLRARLRGRVDVSRSFSIGGSVFVEDRVEPRT DISNIFSSDKPIGVSVQGATVDVNYVNDRVRWTNGLGIRNEDYENGRQIGTGLPIDQSYRDRTVLDGRTRVSYAVSPNFA VFGQGTYEQRDYDAEQIFGGLPRSRDSAGYTVAGGVDFELNSLIRGDVAVGYLKETKDDDFFEEVSGLSFDGRIQWFPTQ LTTLTFNGNRRVSDTGLFESPTAIESRAGVRVDHELRRNIVLSARADYLSYEFEEIDRKDEGTDLEVSAIYKMNRRVHFD TFVTRADRDVSGVDVFGDPSYGVTTIGVGVTLFP
Specific function: Unknown
COG id: COG5338
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48074; Mature: 48074
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS00214 FABP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMVNSMTDLKRLSLTSVAVCAVAASVANAQGSDYYSRDKYTAVLDRPQPEFDPEPVRLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEE TFRVNSAAELGVSYTDNVYVISANEESGAIGRAGLRASGDTTWSVHSLGFDVSARRNEYF EEEECCHHHCCCEECCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHC DQGDESNNDLRARLRGRVDVSRSFSIGGSVFVEDRVEPRTDISNIFSSDKPIGVSVQGAT CCCCCCCCHHHHEEECCEEECEEEECCCEEEEECCCCCCHHHHHHHCCCCCCEEEEECCE VDVNYVNDRVRWTNGLGIRNEDYENGRQIGTGLPIDQSYRDRTVLDGRTRVSYAVSPNFA EEEEECCCEEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCEEECCCCEEEEEECCCEE VFGQGTYEQRDYDAEQIFGGLPRSRDSAGYTVAGGVDFELNSLIRGDVAVGYLKETKDDD EEECCCCCCCCCCHHHHHCCCCCCCCCCCEEEECCCCEEHHHHEECCEEEEEHHCCCCCH FFEEVSGLSFDGRIQWFPTQLTTLTFNGNRRVSDTGLFESPTAIESRAGVRVDHELRRNI HHHHHHCCCCCCEEEEEEEEEEEEEECCCEEECCCCCCCCCCHHHHCCCCEECHHHHCCE VLSARADYLSYEFEEIDRKDEGTDLEVSAIYKMNRRVHFDTFVTRADRDVSGVDVFGDPS EEEECCCHHEEEHHHHCCCCCCCCEEEEEEEECCCEEEEHHHHHHCCCCCCCEEEECCCC YGVTTIGVGVTLFP CCEEEEECCEEECC >Mature Secondary Structure MRMVNSMTDLKRLSLTSVAVCAVAASVANAQGSDYYSRDKYTAVLDRPQPEFDPEPVRLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEE TFRVNSAAELGVSYTDNVYVISANEESGAIGRAGLRASGDTTWSVHSLGFDVSARRNEYF EEEECCHHHCCCEECCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHC DQGDESNNDLRARLRGRVDVSRSFSIGGSVFVEDRVEPRTDISNIFSSDKPIGVSVQGAT CCCCCCCCHHHHEEECCEEECEEEECCCEEEEECCCCCCHHHHHHHCCCCCCEEEEECCE VDVNYVNDRVRWTNGLGIRNEDYENGRQIGTGLPIDQSYRDRTVLDGRTRVSYAVSPNFA EEEEECCCEEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCEEECCCCEEEEEECCCEE VFGQGTYEQRDYDAEQIFGGLPRSRDSAGYTVAGGVDFELNSLIRGDVAVGYLKETKDDD EEECCCCCCCCCCHHHHHCCCCCCCCCCCEEEECCCCEEHHHHEECCEEEEEHHCCCCCH FFEEVSGLSFDGRIQWFPTQLTTLTFNGNRRVSDTGLFESPTAIESRAGVRVDHELRRNI HHHHHHCCCCCCEEEEEEEEEEEEEECCCEEECCCCCCCCCCHHHHCCCCEECHHHHCCE VLSARADYLSYEFEEIDRKDEGTDLEVSAIYKMNRRVHFDTFVTRADRDVSGVDVFGDPS EEEECCCHHEEEHHHHCCCCCCCCEEEEEEEECCCEEEEHHHHHHCCCCCCCEEEECCCC YGVTTIGVGVTLFP CCEEEEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA