| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is sugE [H]
Identifier: 114797945
GI number: 114797945
Start: 2769593
End: 2769907
Strand: Direct
Name: sugE [H]
Synonym: HNE_2609
Alternate gene names: 114797945
Gene position: 2769593-2769907 (Clockwise)
Preceding gene: 114797415
Following gene: 114798935
Centisome position: 74.75
GC content: 61.59
Gene sequence:
>315_bases ATGCCTTGGGTCTTTCTTGTTATCGCCGGTCTTCTGGAAATCGTCTGGGCAACCTCGATGAAGCAATCGGCCGGGTTCAC CCGCCTCGGCCCCAGCCTCATTACCCTCGCCGCCATGCCTGCCAGCTTCCTGCTGCTGGCGCTTGCCATGCGCAGCCTGC CGCTGGGCACGTCTTACATGGTGTGGACGGGCATTGGCGCGGTGGGCGCGTTTATTGTGGGCATCCTGTGGATGGGCGAA GCCATAACGCCTCTGCGCGTGCTGGCGGCGGCGCTGATTGCCGGCGGTATGATCCTGATGAAAATCGCTGAATAA
Upstream 100 bases:
>100_bases TGAGCTCTGCCCCAAACCGCCTATCTAACCTGCACAGGCAGGAGGACGGCCTCCCCCATATCGGGAACGCTTCGGGACGG CCCGTTTACGGGAGCCCCCC
Downstream 100 bases:
>100_bases TTCCGCATTTAATCCGGTCCGCGAGCCCCCGAGAATTTAGGCATATCCAAGTGAGGTTGAGCGGGGCGACGAAATGCCCG CTTTGCTTTGGATCAATTGG
Product: quaternary ammonium compound-resistance protein SugE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MPWVFLVIAGLLEIVWATSMKQSAGFTRLGPSLITLAAMPASFLLLALAMRSLPLGTSYMVWTGIGAVGAFIVGILWMGE AITPLRVLAAALIAGGMILMKIAE
Sequences:
>Translated_104_residues MPWVFLVIAGLLEIVWATSMKQSAGFTRLGPSLITLAAMPASFLLLALAMRSLPLGTSYMVWTGIGAVGAFIVGILWMGE AITPLRVLAAALIAGGMILMKIAE >Mature_103_residues PWVFLVIAGLLEIVWATSMKQSAGFTRLGPSLITLAAMPASFLLLALAMRSLPLGTSYMVWTGIGAVGAFIVGILWMGEA ITPLRVLAAALIAGGMILMKIAE
Specific function: Quaternary ammonium compound efflux pump. Confers resistance to cetylpyridinium, cetyldimethylethyl ammonium and cetrimide cations [H]
COG id: COG2076
COG function: function code P; Membrane transporters of cations and cationic drugs
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the small multidrug resistance (SMR) protein family. SugE (TC 2.A.7.1.4) subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082378, Length=103, Percent_Identity=57.2815533980583, Blast_Score=111, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000390 [H]
Pfam domain/function: PF00893 Multi_Drug_Res [H]
EC number: NA
Molecular weight: Translated: 10934; Mature: 10802
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.7 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.8 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWVFLVIAGLLEIVWATSMKQSAGFTRLGPSLITLAAMPASFLLLALAMRSLPLGTSYM CCHHHHHHHHHHHHHHHHHHHHHCCCCHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH VWTGIGAVGAFIVGILWMGEAITPLRVLAAALIAGGMILMKIAE HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHEEECC >Mature Secondary Structure PWVFLVIAGLLEIVWATSMKQSAGFTRLGPSLITLAAMPASFLLLALAMRSLPLGTSYM CHHHHHHHHHHHHHHHHHHHHHCCCCHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH VWTGIGAVGAFIVGILWMGEAITPLRVLAAALIAGGMILMKIAE HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]