| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797939
Identifier: 114797939
GI number: 114797939
Start: 3187981
End: 3188547
Strand: Direct
Name: 114797939
Synonym: HNE_3019
Alternate gene names: NA
Gene position: 3187981-3188547 (Clockwise)
Preceding gene: 114798749
Following gene: 114798948
Centisome position: 86.04
GC content: 56.97
Gene sequence:
>567_bases ATGCCCAGCGCCCGATACAGCCTTGCCGCGCGCCTGCGTGAGCGCTTCAGCAGCTATGCCAGCGAAAATCGCGGCGTGGC TGCGGTGGAGTTCGCCCTGATTGCGGCGCCCTTCTTTTTTCTGATTTTTGGCCTGCTCGAAGTGTGCATGATCTTCATCA TGGCCGCGATCCTGGATCATGGGGTTGCCAATGCTGCCCGCCCTCTTCGCACCGGCGCAGCCCAATCCGCCGGTATGTCC GCAGAAGAATTTCGGAGCGCGCTGTGTAACGAAATGATGGGGATGATGGATTGTGAGAACCGCCTCTACTTTGATGTTCA GACAGTTAGTGGATTCTCCAGCACACCATCGGGATCGCCCATCAACGTCGCCGGTCTGATAGATGACGAAGATTTCGGAT TTGCGCCCGGTGGACCAAATGACATTGTCGCCGTGCGCGTGTTTTACGAGTGGGATTTGTTCACTCCCGGCATCACAGCG CCGCTCGCCAATTTGGCTGAGAACAGGCACCTGATCCAGTCCAACGCTGTGTTCCGCAATGAGCCCTTCGGGAGTGAATC AGAATGA
Upstream 100 bases:
>100_bases CAGGACAAGATGCATGAAATTGCATTGACCTGATCAACGGGACACAAACCGGAACATGATAGGTCTTCAGGCTGATCCCA GTGGGGAAGTTCGCCTGATG
Downstream 100 bases:
>100_bases TGTTCCGTCAGTATTTTGAGGCACGCCTGTCTCGGAAGAATGCTCCGCGAAAGCGCGGCGTCAAAAGTCTTTTGCGAAAT GAGGACGGTGTATCCGCTGT
Product: TadE-like protein
Products: NA
Alternate protein names: Flp Pilus Assembly Protein TadG; TadE-Like; Transmembrane Protein; TadE-Like Protein; TadG-Like Pilus Assembly Protein; Signal Peptide; Tade Family Protein
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MPSARYSLAARLRERFSSYASENRGVAAVEFALIAAPFFFLIFGLLEVCMIFIMAAILDHGVANAARPLRTGAAQSAGMS AEEFRSALCNEMMGMMDCENRLYFDVQTVSGFSSTPSGSPINVAGLIDDEDFGFAPGGPNDIVAVRVFYEWDLFTPGITA PLANLAENRHLIQSNAVFRNEPFGSESE
Sequences:
>Translated_188_residues MPSARYSLAARLRERFSSYASENRGVAAVEFALIAAPFFFLIFGLLEVCMIFIMAAILDHGVANAARPLRTGAAQSAGMS AEEFRSALCNEMMGMMDCENRLYFDVQTVSGFSSTPSGSPINVAGLIDDEDFGFAPGGPNDIVAVRVFYEWDLFTPGITA PLANLAENRHLIQSNAVFRNEPFGSESE >Mature_187_residues PSARYSLAARLRERFSSYASENRGVAAVEFALIAAPFFFLIFGLLEVCMIFIMAAILDHGVANAARPLRTGAAQSAGMSA EEFRSALCNEMMGMMDCENRLYFDVQTVSGFSSTPSGSPINVAGLIDDEDFGFAPGGPNDIVAVRVFYEWDLFTPGITAP LANLAENRHLIQSNAVFRNEPFGSESE
Specific function: Unknown
COG id: COG4961
COG function: function code U; Flp pilus assembly protein TadG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20409; Mature: 20278
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSARYSLAARLRERFSSYASENRGVAAVEFALIAAPFFFLIFGLLEVCMIFIMAAILDH CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GVANAARPLRTGAAQSAGMSAEEFRSALCNEMMGMMDCENRLYFDVQTVSGFSSTPSGSP CHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCC INVAGLIDDEDFGFAPGGPNDIVAVRVFYEWDLFTPGITAPLANLAENRHLIQSNAVFRN EEEEEEECCCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHCCHHHHCCCEECC EPFGSESE CCCCCCCC >Mature Secondary Structure PSARYSLAARLRERFSSYASENRGVAAVEFALIAAPFFFLIFGLLEVCMIFIMAAILDH CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GVANAARPLRTGAAQSAGMSAEEFRSALCNEMMGMMDCENRLYFDVQTVSGFSSTPSGSP CHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCC INVAGLIDDEDFGFAPGGPNDIVAVRVFYEWDLFTPGITAPLANLAENRHLIQSNAVFRN EEEEEEECCCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHCCHHHHCCCEECC EPFGSESE CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA