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The map label for this gene is nrtC [H]

Identifier: 114797910

GI number: 114797910

Start: 2334064

End: 2335206

Strand: Reverse

Name: nrtC [H]

Synonym: HNE_2232

Alternate gene names: 114797910

Gene position: 2335206-2334064 (Counterclockwise)

Preceding gene: 114799661

Following gene: 114800210

Centisome position: 63.03

GC content: 67.02

Gene sequence:

>1143_bases
ATGATCCCGCTACGCCTCGGCTACGTGCCGCTGAACGATTGCGCCCCGCTGGTCATGGCGCAGGCGCTTGGCCTCTTCGA
GGCTCAGGGACTGGACGTCCGGCTCGTCCGTCAGAATGCCTGGTCCACGGCGCGGGAACTCATCCAGCTCGGGATGCTGG
ACGGGGGGCATATGCTGGCGCCGGCGGTGGTTGCGCGCTGGCTGGACGGCGGTCCCGGGGGACTTGTGGCCCCGATGGCC
CTCAGCCTGAACGGAAATTCGATCATTGTGTCCCTGGCCCTCTACGGGCGTATGTGTGACGCGCTGGGCCATCCCCCGCG
CACCGCCCTGGAAGCGGCCCGGTCCCTTCATACGGTGGTGTCTGCAGATGCGGCGGCGGGGCGGCGGCCCCTGACCTTTG
CGGCTGTGTTTCCGGAATCGCGGCAGTATATCGAGTTGAAGCGGTTTTTTTCTGCGGGCGGGATCGATCCGGACCTCATC
CGCATCCTGATTGTACCCCCACCTGAGGTGGACGGCTTTCTGGAGCGCGACCTCGTCGACGGATACTGTGTCGGGGAGCC
CTGGGGGTCCTACTCGGTGGCGCGCGGCTATGGCGCGATGGTGGCGAGCTCCCTGGATCTGCGACCTGCGGGGATCGAAA
AGGTGCTGGCGGTGGGGCCTCCCATTCTGGAGGCCGACGCCACCGGCGCCCTCGTGCGCGCGGTCTCAGGTGCGTCTGTC
TGGCTGGATCAGCCCGGCAATCGCGCCGCCGCCGCCGGGGTCCTCAGTCAGAAGGGCTTTGTGCCTGTGCCGGAGGAGGT
TGTCCGTCGCGGTCTTGAAGGGCAGATCGTCCGGTATCCGGGCGGCGCGGCAGAGACGCACGCGGATTTCATGGTCTTTG
ATCGTTACGCGGCTGGATTCCCCTGGCTCAGCCAGGCGCGGCTGATCGCAGAGGAACTGGTGGCGAGCGGCGTGTCTGTC
AGCGCAATGGGCGCAGAGCAGGCCTTCCGGCCGGATCTTTACCGCGCGGCGCTTGCAGGGAGCGGGCGCAGTCTGCCGGG
CACCGACGAGAAACCGGAGGCCTGTCATCCTGCGGGCTGGACATTCGGCGACGCGGATCAACCCATCGAAATGGGCCCCG
ATCGCCCGCTTTTTGATCTTTGA

Upstream 100 bases:

>100_bases
CCTTCGCGCTTCTACGCAAATCTGCCATGGACCGGTGCATCACGATTGCGGCGGTCGCCCGCGAGATCCTCGCTTCGGAG
CAATTGCTGGGAGGGGAAGA

Downstream 100 bases:

>100_bases
GCCGTTAAAGCGCGCAAATTTTCGCCGGCGCGCCTGAAAAGCATCCTCCGTGGACAGAGGCTGTCGACTTCAATGCCGCC
ATAAAGGCTGTTCGGGGTGA

Product: putative nitrate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MIPLRLGYVPLNDCAPLVMAQALGLFEAQGLDVRLVRQNAWSTARELIQLGMLDGGHMLAPAVVARWLDGGPGGLVAPMA
LSLNGNSIIVSLALYGRMCDALGHPPRTALEAARSLHTVVSADAAAGRRPLTFAAVFPESRQYIELKRFFSAGGIDPDLI
RILIVPPPEVDGFLERDLVDGYCVGEPWGSYSVARGYGAMVASSLDLRPAGIEKVLAVGPPILEADATGALVRAVSGASV
WLDQPGNRAAAAGVLSQKGFVPVPEEVVRRGLEGQIVRYPGGAAETHADFMVFDRYAAGFPWLSQARLIAEELVASGVSV
SAMGAEQAFRPDLYRAALAGSGRSLPGTDEKPEACHPAGWTFGDADQPIEMGPDRPLFDL

Sequences:

>Translated_380_residues
MIPLRLGYVPLNDCAPLVMAQALGLFEAQGLDVRLVRQNAWSTARELIQLGMLDGGHMLAPAVVARWLDGGPGGLVAPMA
LSLNGNSIIVSLALYGRMCDALGHPPRTALEAARSLHTVVSADAAAGRRPLTFAAVFPESRQYIELKRFFSAGGIDPDLI
RILIVPPPEVDGFLERDLVDGYCVGEPWGSYSVARGYGAMVASSLDLRPAGIEKVLAVGPPILEADATGALVRAVSGASV
WLDQPGNRAAAAGVLSQKGFVPVPEEVVRRGLEGQIVRYPGGAAETHADFMVFDRYAAGFPWLSQARLIAEELVASGVSV
SAMGAEQAFRPDLYRAALAGSGRSLPGTDEKPEACHPAGWTFGDADQPIEMGPDRPLFDL
>Mature_380_residues
MIPLRLGYVPLNDCAPLVMAQALGLFEAQGLDVRLVRQNAWSTARELIQLGMLDGGHMLAPAVVARWLDGGPGGLVAPMA
LSLNGNSIIVSLALYGRMCDALGHPPRTALEAARSLHTVVSADAAAGRRPLTFAAVFPESRQYIELKRFFSAGGIDPDLI
RILIVPPPEVDGFLERDLVDGYCVGEPWGSYSVARGYGAMVASSLDLRPAGIEKVLAVGPPILEADATGALVRAVSGASV
WLDQPGNRAAAAGVLSQKGFVPVPEEVVRRGLEGQIVRYPGGAAETHADFMVFDRYAAGFPWLSQARLIAEELVASGVSV
SAMGAEQAFRPDLYRAALAGSGRSLPGTDEKPEACHPAGWTFGDADQPIEMGPDRPLFDL

Specific function: Probably part of a high-affinity binding-protein- dependent transport system for nitrate. Probably responsible for energy coupling to the transport system [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR015168
- InterPro:   IPR005890 [H]

Pfam domain/function: PF00005 ABC_tran; PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 40160; Mature: 40160

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPLRLGYVPLNDCAPLVMAQALGLFEAQGLDVRLVRQNAWSTARELIQLGMLDGGHMLA
CCCEEECCEECCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCHHH
PAVVARWLDGGPGGLVAPMALSLNGNSIIVSLALYGRMCDALGHPPRTALEAARSLHTVV
HHHHHHHHCCCCCCEEEEEEEEECCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
SADAAAGRRPLTFAAVFPESRQYIELKRFFSAGGIDPDLIRILIVPPPEVDGFLERDLVD
HHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHHEEEEEECCCCCCCHHHHHCCC
GYCVGEPWGSYSVARGYGAMVASSLDLRPAGIEKVLAVGPPILEADATGALVRAVSGASV
CEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCEECCCCHHHHHHHCCCEE
WLDQPGNRAAAAGVLSQKGFVPVPEEVVRRGLEGQIVRYPGGAAETHADFMVFDRYAAGF
EEECCCCCHHHHHHHHCCCCCCCCHHHHHCCCCCEEEECCCCCCCCCCCCEEEHHHHCCC
PWLSQARLIAEELVASGVSVSAMGAEQAFRPDLYRAALAGSGRSLPGTDEKPEACHPAGW
CCHHHHHHHHHHHHHCCCCEEECCCHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
TFGDADQPIEMGPDRPLFDL
CCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIPLRLGYVPLNDCAPLVMAQALGLFEAQGLDVRLVRQNAWSTARELIQLGMLDGGHMLA
CCCEEECCEECCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCHHH
PAVVARWLDGGPGGLVAPMALSLNGNSIIVSLALYGRMCDALGHPPRTALEAARSLHTVV
HHHHHHHHCCCCCCEEEEEEEEECCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
SADAAAGRRPLTFAAVFPESRQYIELKRFFSAGGIDPDLIRILIVPPPEVDGFLERDLVD
HHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHHEEEEEECCCCCCCHHHHHCCC
GYCVGEPWGSYSVARGYGAMVASSLDLRPAGIEKVLAVGPPILEADATGALVRAVSGASV
CEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCEECCCCHHHHHHHCCCEE
WLDQPGNRAAAAGVLSQKGFVPVPEEVVRRGLEGQIVRYPGGAAETHADFMVFDRYAAGF
EEECCCCCHHHHHHHHCCCCCCCCHHHHHCCCCCEEEECCCCCCCCCCCCEEEHHHHCCC
PWLSQARLIAEELVASGVSVSAMGAEQAFRPDLYRAALAGSGRSLPGTDEKPEACHPAGW
CCHHHHHHHHHHHHHCCCCEEECCCHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
TFGDADQPIEMGPDRPLFDL
CCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]