| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797856
Identifier: 114797856
GI number: 114797856
Start: 2443047
End: 2444651
Strand: Reverse
Name: 114797856
Synonym: HNE_2339
Alternate gene names: NA
Gene position: 2444651-2443047 (Counterclockwise)
Preceding gene: 114798823
Following gene: 114800505
Centisome position: 65.98
GC content: 61.18
Gene sequence:
>1605_bases ATGGCGGTCGTCCTTAGCCCGCTGCTGATAATGGGCGCCATACACGCCTGGAGCGAACAGCAGTTTTCCCGGCAGCTCCG GTTCCATGAACTTCATCAGAGTGCGCAGGATCGCCTGCGCCAGACCGATGCCATGCTGGTGCGCGCCCGCATGGCGCTGC GCATGATCACGATCGACGACCGGGAGCTGACCTGTAACGAAATCGGTGACCGTCTGGCGGTGCTTGAACTGCCGCTGCGC AATACCATCCGCTTTGATGCGGACGGCCTGGTGACCTGTAATGAGGTGGGGGAAGGCCTGGTCGGGATGCCGATGCCCCA GCTCGAATGGAACGACCGGATGCGCAAGGGCGTGGAGTCGTTCGAGGATAGCGGTCAACGCGGCATGGCGCTGGGAGACC CGGCGATCTACCTGCTGCGCCGGCAGTCTGACGCGCTCGGCAACTATAGCGGATCTATCGCGCTCACCTTGTCGCTGGAG GATATTGTCGCCCGTATGTCGGGCATGTCCCAGTCCAGTGGGGTGACGGTGTCGCTGGTAGTGCCGGGCGGGCAGGTCAT CGGCTCCAACATCGTTGCTGGCATTCCCATGGAATGGATCAGTGATGGGGCGGCGCTGAACAAAAGAACCTACCGGCTCC GGCCCGACCAGGGCCCACCTCTGGATGTGGTGCTGCTGCCTCTTTCGGAAAATGGGCTGTGGCTGATGGTGGGATCACCC GCGCCGCCCCAGCGCGTGGAGGTCATTCTCGCCTTTCTGGTGCCGATCCTGGCCTATCTCGCGGCGCTTCTGGCGGCCAG CTGGATTGCCGACGCCATGGTACTGCGTTGGCTGGAGCGGATACGCCTGCGGATCTTGGATATGCGCAGCTCGGCCCGAT ATGCGCTGCTTGCGCCAGAGCTGTCGCGCGCGCCTCTGGAGGTACAGCAGGTCGCCGAAGCCTTTGACGACCTGACCAGC CGTGTTTCAAAACATGAGTCAGACCTGCAACTGGCGCTCGTCCAGATGAAGGCGGCGTTCCGTGAAGTGCACCACCGCGT AAAAAATAACCTGCAGGTGATGCTCAGCATGCTGAAGCTGCAAGGTCGGGGCGAGGCACTGCCTGAAACCCAAAGCGCTC TCAAGGTGGCCGCTCATCGTGTGGCGATGATGGCGGCGGTGCATCATACCCTTCTGAACGAGGGAGACCTTGATACGGTT GAAGCGCTCGACCTGTTCAATGCCATCTGCAACCAGGTGGATGAACAGAAAGGTTGGGGTGAAGGCGGCCGGCAAATCAT TCCGGATGTTACGCCCGGCCCGCTGCCTGCAGATCTTGCCGTTCCCGTGGGAATGTTCGTGCTGGAATCTGTAAGCCTGC TTTGCCCGGAAGCGGATGAGGACGAGGTCGCAGATGTTACGTTGCATTTCGACCGGGAGCATGGCGATTGCCGACTGGCG CTCACCTGTGGCGGCGGTGAGGAAGGCTCCGTTGAGATGGACCGGGATACCAGCCTGTTTCTCTCAGCCTTTGCCCGTCA GATTGGTGGAACCGTTTCGGTCAATGCCCAGGAAGATGGCCGGATTGCCATTGAACTGTTGTTCTCCATCCCGGTTCCGG ACTGA
Upstream 100 bases:
>100_bases AGGTTGACGTCCTCAGCCGCCATAACGGATGACGGTAGTCAGCGGGGAAGGACGCGCCAAGCGCAGGCGCCTGAGCCTCA GGCTTCAGGTAATTTCTGCC
Downstream 100 bases:
>100_bases TCCGACGGTCCTTCAGATACGTAGACAAAGAAAAAGGCGCGCCTCGGGAGGCGCGCCTTTATGTCTGGATATTGGACTGT TGATTAGTCCGTAAGTTCGT
Product: sensor histidine kinase
Products: NA
Alternate protein names: Sensor Histidine Kinase; Sensory Transduction Protein Kinase; Sensory Transduction Histidine Kinase; Two Component Hybrid Sensor Histidine Kinase And Regulator
Number of amino acids: Translated: 534; Mature: 533
Protein sequence:
>534_residues MAVVLSPLLIMGAIHAWSEQQFSRQLRFHELHQSAQDRLRQTDAMLVRARMALRMITIDDRELTCNEIGDRLAVLELPLR NTIRFDADGLVTCNEVGEGLVGMPMPQLEWNDRMRKGVESFEDSGQRGMALGDPAIYLLRRQSDALGNYSGSIALTLSLE DIVARMSGMSQSSGVTVSLVVPGGQVIGSNIVAGIPMEWISDGAALNKRTYRLRPDQGPPLDVVLLPLSENGLWLMVGSP APPQRVEVILAFLVPILAYLAALLAASWIADAMVLRWLERIRLRILDMRSSARYALLAPELSRAPLEVQQVAEAFDDLTS RVSKHESDLQLALVQMKAAFREVHHRVKNNLQVMLSMLKLQGRGEALPETQSALKVAAHRVAMMAAVHHTLLNEGDLDTV EALDLFNAICNQVDEQKGWGEGGRQIIPDVTPGPLPADLAVPVGMFVLESVSLLCPEADEDEVADVTLHFDREHGDCRLA LTCGGGEEGSVEMDRDTSLFLSAFARQIGGTVSVNAQEDGRIAIELLFSIPVPD
Sequences:
>Translated_534_residues MAVVLSPLLIMGAIHAWSEQQFSRQLRFHELHQSAQDRLRQTDAMLVRARMALRMITIDDRELTCNEIGDRLAVLELPLR NTIRFDADGLVTCNEVGEGLVGMPMPQLEWNDRMRKGVESFEDSGQRGMALGDPAIYLLRRQSDALGNYSGSIALTLSLE DIVARMSGMSQSSGVTVSLVVPGGQVIGSNIVAGIPMEWISDGAALNKRTYRLRPDQGPPLDVVLLPLSENGLWLMVGSP APPQRVEVILAFLVPILAYLAALLAASWIADAMVLRWLERIRLRILDMRSSARYALLAPELSRAPLEVQQVAEAFDDLTS RVSKHESDLQLALVQMKAAFREVHHRVKNNLQVMLSMLKLQGRGEALPETQSALKVAAHRVAMMAAVHHTLLNEGDLDTV EALDLFNAICNQVDEQKGWGEGGRQIIPDVTPGPLPADLAVPVGMFVLESVSLLCPEADEDEVADVTLHFDREHGDCRLA LTCGGGEEGSVEMDRDTSLFLSAFARQIGGTVSVNAQEDGRIAIELLFSIPVPD >Mature_533_residues AVVLSPLLIMGAIHAWSEQQFSRQLRFHELHQSAQDRLRQTDAMLVRARMALRMITIDDRELTCNEIGDRLAVLELPLRN TIRFDADGLVTCNEVGEGLVGMPMPQLEWNDRMRKGVESFEDSGQRGMALGDPAIYLLRRQSDALGNYSGSIALTLSLED IVARMSGMSQSSGVTVSLVVPGGQVIGSNIVAGIPMEWISDGAALNKRTYRLRPDQGPPLDVVLLPLSENGLWLMVGSPA PPQRVEVILAFLVPILAYLAALLAASWIADAMVLRWLERIRLRILDMRSSARYALLAPELSRAPLEVQQVAEAFDDLTSR VSKHESDLQLALVQMKAAFREVHHRVKNNLQVMLSMLKLQGRGEALPETQSALKVAAHRVAMMAAVHHTLLNEGDLDTVE ALDLFNAICNQVDEQKGWGEGGRQIIPDVTPGPLPADLAVPVGMFVLESVSLLCPEADEDEVADVTLHFDREHGDCRLAL TCGGGEEGSVEMDRDTSLFLSAFARQIGGTVSVNAQEDGRIAIELLFSIPVPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58493; Mature: 58362
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVVLSPLLIMGAIHAWSEQQFSRQLRFHELHQSAQDRLRQTDAMLVRARMALRMITIDD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC RELTCNEIGDRLAVLELPLRNTIRFDADGLVTCNEVGEGLVGMPMPQLEWNDRMRKGVES CCCCHHHHCCEEEEEECCCCCCEEECCCCCEEHHHHCCCCCCCCCCCCCHHHHHHHHHHH FEDSGQRGMALGDPAIYLLRRQSDALGNYSGSIALTLSLEDIVARMSGMSQSSGVTVSLV HHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCEEEEEE VPGGQVIGSNIVAGIPMEWISDGAALNKRTYRLRPDQGPPLDVVLLPLSENGLWLMVGSP ECCCCEECCCCEECCCHHHHCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCEEEEECCC APPQRVEVILAFLVPILAYLAALLAASWIADAMVLRWLERIRLRILDMRSSARYALLAPE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC LSRAPLEVQQVAEAFDDLTSRVSKHESDLQLALVQMKAAFREVHHRVKNNLQVMLSMLKL CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGRGEALPETQSALKVAAHRVAMMAAVHHTLLNEGDLDTVEALDLFNAICNQVDEQKGWG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC EGGRQIIPDVTPGPLPADLAVPVGMFVLESVSLLCPEADEDEVADVTLHFDREHGDCRLA CCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCEEEE LTCGGGEEGSVEMDRDTSLFLSAFARQIGGTVSVNAQEDGRIAIELLFSIPVPD EEECCCCCCCEEECCCHHHHHHHHHHHHCCEEEECCCCCCCEEEEEEEECCCCC >Mature Secondary Structure AVVLSPLLIMGAIHAWSEQQFSRQLRFHELHQSAQDRLRQTDAMLVRARMALRMITIDD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC RELTCNEIGDRLAVLELPLRNTIRFDADGLVTCNEVGEGLVGMPMPQLEWNDRMRKGVES CCCCHHHHCCEEEEEECCCCCCEEECCCCCEEHHHHCCCCCCCCCCCCCHHHHHHHHHHH FEDSGQRGMALGDPAIYLLRRQSDALGNYSGSIALTLSLEDIVARMSGMSQSSGVTVSLV HHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCEEEEEE VPGGQVIGSNIVAGIPMEWISDGAALNKRTYRLRPDQGPPLDVVLLPLSENGLWLMVGSP ECCCCEECCCCEECCCHHHHCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCEEEEECCC APPQRVEVILAFLVPILAYLAALLAASWIADAMVLRWLERIRLRILDMRSSARYALLAPE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC LSRAPLEVQQVAEAFDDLTSRVSKHESDLQLALVQMKAAFREVHHRVKNNLQVMLSMLKL CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGRGEALPETQSALKVAAHRVAMMAAVHHTLLNEGDLDTVEALDLFNAICNQVDEQKGWG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC EGGRQIIPDVTPGPLPADLAVPVGMFVLESVSLLCPEADEDEVADVTLHFDREHGDCRLA CCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCEEEE LTCGGGEEGSVEMDRDTSLFLSAFARQIGGTVSVNAQEDGRIAIELLFSIPVPD EEECCCCCCCEEECCCHHHHHHHHHHHHCCEEEECCCCCCCEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA