The gene/protein map for NC_008358 is currently unavailable.
Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is fyuA [H]

Identifier: 114797811

GI number: 114797811

Start: 1495892

End: 1498114

Strand: Direct

Name: fyuA [H]

Synonym: HNE_1470

Alternate gene names: 114797811

Gene position: 1495892-1498114 (Clockwise)

Preceding gene: 114799401

Following gene: 114797255

Centisome position: 40.37

GC content: 59.56

Gene sequence:

>2223_bases
ATGAAACCACTTTCGATCCGTCTTGCGGCGGGCGCTTGTTCACTTGGCGTGATGGCATTCTGCGTGGCCACAGCCCATGC
GCAGGAGACGATGGGGCAGGCGAGCGGGGAGACCGCTGCGGCCGCGGAAGCATCCCAGGAGAGCGCGCGGACGCTCGGCA
CCGTGACAGTAACCGCGCAACGCCGCAGCGAGAGCCTGCAGGACGTCCCCGTCGTGGTAACCGTTTTTGGCGCTGATGAA
ATTGCGGCAGCGCGCATTCAGCAGATCGACGATATTGTGACGCGCACGCCGGGGCTCAGTTTTGACGCGTTTCCCGCCTC
CCAGCCGCGCCTTTATATTCGTGGTATCGGCTCAGGCGACCGCGGCGCGTCGGGTGATCCGAGCTCGGCCGTATTTCTTG
ATGAAGTCTATCTGGGCCGGCCTTCGGCTGTGGCCTTTGATGCGTTCGATGTCGAGCGCATCGAAGTGCTCAAGGGGCCA
CAAGGCACCCTGTACGGACGAAATGTCGTCGGCGGCGCCATCAATGTGATCTCGAAACGGCCGGTGCTTGACAGTTTCGG
GGCGGGCGCAAGTGCGACGGCCGGCAATTACGGTCGGCTGGACGGTGCAGCCTTCCTGAACGCACCGGTGGCTGGCAACA
CTGGTGCAGTGCGGGTCAGCGGCTCTTATCGCTCGAATGACGGCTATGTGGAAAACCCGTTCCTCGGCCGGGATGTCGAC
GACCAGGAAACGCTCAGCGGCCGCCTGCAATACTATGCCGAGCCGACCGACAGCCTGCGGATGCATATCACCCTCGACGG
AACACGCGACCGTGCCCTGGGTACGGCCAACCATGTCCTCGAGCTTGACGAAACTGATCCGCTTTCAAACTTCTATGCCC
AGAATTTCGATCCCGATGTGACCTATGGCTCCGATCCGGGCTTCATGGAGCGCGATACATGGGGCGCGCGCGGCGAAGTA
GCTTATGACTTCAGTTTTGCAACGGTGACGGCGCTGCTTTCCTACCGCGATCTGGACTATGGCTTCGGCTATGATTTTGA
CGGCGGCAATCCGGACCCCACGTCGCCGGGCTTCAATGCCATCAATATCAGCGGAGGAAATGAAGAAACGGCAGAGCTTT
CCAGCCAGGAACTGCGCTTTTCATCGCTTCCTGACAGTCCGGTCACCTGGGTTGTGGGGCTCTATCGCTACAATCAGGAT
GTGCTGCGCACGGACAGTCTGATCCTGAATGCTGACGTGATTGCTCCCATCGAGCTGTTCGATGCGTTTGTCGCTGATGC
CGAACTCGACAGCCACGCCGTGTTCGGGGACGTGTCGTTGCCTGTGACGGATAAGCTGACGGTGTTCGGCGGCCTGCGCT
ATTCCAGGGACGAGAAGACGCAGCGGGTTTTCAACACCGACAGCAACGTGCCTTTGCGGGCGGACGACCTGTTTGATGCA
ACCGCTTCGGCCGATTTTGATGACCTGACCTATCGCGCGGGCCTGGAATATCAGCTGACACCCGACCACATGGCCTATGC
CAGCGTGTCGCGCGGCTTCAAGAGCGGCGGGTTCAACGGTGAGCCTTCAGATGCTGCGGCAGCCGTCACCCCCTTCGACC
CGGAAGTGGCTGTGCAGTATGAGGCCGGCCATAAGAGCCTGTTTCTCGATGGCACCCTCATCTGGAACAATTCGGTGTTC
TATGTCGACTACACCGATCTGCAGACAACACAGACCAATAATGGCGTCCGCATCATCACCAATGCCGGCGAAGCGCATAT
CCAGGGCTACGAGACCCAGCTGCAGGTGAGCCCTGCGACGAACTTCAACCTGGCCGTGGCGTATGCGTATACCGACGCGG
TGTTCGACGAGTTTGTCGAAGACGGCGTGGATTATTCGGGCAATCAGATTTCCAGGTCACCAAAACACAAGGTGACCGTG
TCGCCTTCCTACACGCTGGCTCTGGCGAATGGTCCGGATCTGACTTTTGCAGTGGATTATCAGTACACAAGCAAGATTTT
CGATGACAACAACAACCAGCCTCCTGAACTTCGGGACGCGACGAGCTTCGTGGATGCACGGGTCGTTCTGGATGGTCTCG
GCAACGGGATGAGCGTGTCTCTCTGGGGCAAAAACCTTACCGACGAGCGGACACGCACGTTCCAGGGCGGCTTCCTGGGG
GCTAACTTTGGTGCGTTCAATCCTCCCCGCACTTACGGCGTCACCCTGTCCTGGGACTACTGA

Upstream 100 bases:

>100_bases
AAAATGTAAAATCCTTGCCACGTGAAAGACCGTTCCCTGGCCTATGCAAAGCGCGATGGCGGGCAACACGCCGTATGAAA
TGTACCGGGAGGAGTACCCT

Downstream 100 bases:

>100_bases
CATCCTGCGGGAGGCGCCTGACGCGCCTCCCGTTTTTTTTTGAGCTAATTCAGGTTTGATATGAGTGAACAGCTGACACT
GCCCATTAAAGTGCTTGTGC

Product: putative TonB dependent receptor

Products: NA

Alternate protein names: IPR65; IRPC [H]

Number of amino acids: Translated: 740; Mature: 740

Protein sequence:

>740_residues
MKPLSIRLAAGACSLGVMAFCVATAHAQETMGQASGETAAAAEASQESARTLGTVTVTAQRRSESLQDVPVVVTVFGADE
IAAARIQQIDDIVTRTPGLSFDAFPASQPRLYIRGIGSGDRGASGDPSSAVFLDEVYLGRPSAVAFDAFDVERIEVLKGP
QGTLYGRNVVGGAINVISKRPVLDSFGAGASATAGNYGRLDGAAFLNAPVAGNTGAVRVSGSYRSNDGYVENPFLGRDVD
DQETLSGRLQYYAEPTDSLRMHITLDGTRDRALGTANHVLELDETDPLSNFYAQNFDPDVTYGSDPGFMERDTWGARGEV
AYDFSFATVTALLSYRDLDYGFGYDFDGGNPDPTSPGFNAINISGGNEETAELSSQELRFSSLPDSPVTWVVGLYRYNQD
VLRTDSLILNADVIAPIELFDAFVADAELDSHAVFGDVSLPVTDKLTVFGGLRYSRDEKTQRVFNTDSNVPLRADDLFDA
TASADFDDLTYRAGLEYQLTPDHMAYASVSRGFKSGGFNGEPSDAAAAVTPFDPEVAVQYEAGHKSLFLDGTLIWNNSVF
YVDYTDLQTTQTNNGVRIITNAGEAHIQGYETQLQVSPATNFNLAVAYAYTDAVFDEFVEDGVDYSGNQISRSPKHKVTV
SPSYTLALANGPDLTFAVDYQYTSKIFDDNNNQPPELRDATSFVDARVVLDGLGNGMSVSLWGKNLTDERTRTFQGGFLG
ANFGAFNPPRTYGVTLSWDY

Sequences:

>Translated_740_residues
MKPLSIRLAAGACSLGVMAFCVATAHAQETMGQASGETAAAAEASQESARTLGTVTVTAQRRSESLQDVPVVVTVFGADE
IAAARIQQIDDIVTRTPGLSFDAFPASQPRLYIRGIGSGDRGASGDPSSAVFLDEVYLGRPSAVAFDAFDVERIEVLKGP
QGTLYGRNVVGGAINVISKRPVLDSFGAGASATAGNYGRLDGAAFLNAPVAGNTGAVRVSGSYRSNDGYVENPFLGRDVD
DQETLSGRLQYYAEPTDSLRMHITLDGTRDRALGTANHVLELDETDPLSNFYAQNFDPDVTYGSDPGFMERDTWGARGEV
AYDFSFATVTALLSYRDLDYGFGYDFDGGNPDPTSPGFNAINISGGNEETAELSSQELRFSSLPDSPVTWVVGLYRYNQD
VLRTDSLILNADVIAPIELFDAFVADAELDSHAVFGDVSLPVTDKLTVFGGLRYSRDEKTQRVFNTDSNVPLRADDLFDA
TASADFDDLTYRAGLEYQLTPDHMAYASVSRGFKSGGFNGEPSDAAAAVTPFDPEVAVQYEAGHKSLFLDGTLIWNNSVF
YVDYTDLQTTQTNNGVRIITNAGEAHIQGYETQLQVSPATNFNLAVAYAYTDAVFDEFVEDGVDYSGNQISRSPKHKVTV
SPSYTLALANGPDLTFAVDYQYTSKIFDDNNNQPPELRDATSFVDARVVLDGLGNGMSVSLWGKNLTDERTRTFQGGFLG
ANFGAFNPPRTYGVTLSWDY
>Mature_740_residues
MKPLSIRLAAGACSLGVMAFCVATAHAQETMGQASGETAAAAEASQESARTLGTVTVTAQRRSESLQDVPVVVTVFGADE
IAAARIQQIDDIVTRTPGLSFDAFPASQPRLYIRGIGSGDRGASGDPSSAVFLDEVYLGRPSAVAFDAFDVERIEVLKGP
QGTLYGRNVVGGAINVISKRPVLDSFGAGASATAGNYGRLDGAAFLNAPVAGNTGAVRVSGSYRSNDGYVENPFLGRDVD
DQETLSGRLQYYAEPTDSLRMHITLDGTRDRALGTANHVLELDETDPLSNFYAQNFDPDVTYGSDPGFMERDTWGARGEV
AYDFSFATVTALLSYRDLDYGFGYDFDGGNPDPTSPGFNAINISGGNEETAELSSQELRFSSLPDSPVTWVVGLYRYNQD
VLRTDSLILNADVIAPIELFDAFVADAELDSHAVFGDVSLPVTDKLTVFGGLRYSRDEKTQRVFNTDSNVPLRADDLFDA
TASADFDDLTYRAGLEYQLTPDHMAYASVSRGFKSGGFNGEPSDAAAAVTPFDPEVAVQYEAGHKSLFLDGTLIWNNSVF
YVDYTDLQTTQTNNGVRIITNAGEAHIQGYETQLQVSPATNFNLAVAYAYTDAVFDEFVEDGVDYSGNQISRSPKHKVTV
SPSYTLALANGPDLTFAVDYQYTSKIFDDNNNQPPELRDATSFVDARVVLDGLGNGMSVSLWGKNLTDERTRTFQGGFLG
ANFGAFNPPRTYGVTLSWDY

Specific function: Receptor for the bacteriocin pesticin and for the siderophore yersiniabactin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1786344, Length=194, Percent_Identity=29.3814432989691, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1787024, Length=218, Percent_Identity=33.4862385321101, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 79725; Mature: 79725

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLSIRLAAGACSLGVMAFCVATAHAQETMGQASGETAAAAEASQESARTLGTVTVTAQ
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEEEEEEEH
RRSESLQDVPVVVTVFGADEIAAARIQQIDDIVTRTPGLSFDAFPASQPRLYIRGIGSGD
HHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCC
RGASGDPSSAVFLDEVYLGRPSAVAFDAFDVERIEVLKGPQGTLYGRNVVGGAINVISKR
CCCCCCCCCEEEEEEECCCCCCEEEEECCCCEEEEEECCCCCCEECCCCCCCHHHHHCCC
PVLDSFGAGASATAGNYGRLDGAAFLNAPVAGNTGAVRVSGSYRSNDGYVENPFLGRDVD
CCHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCEECCCCEECCCCCCCCCC
DQETLSGRLQYYAEPTDSLRMHITLDGTRDRALGTANHVLELDETDPLSNFYAQNFDPDV
HHHHHCCEEEEEECCCCCEEEEEEECCCCCCCCCCCHHEEEECCCCCHHHHHHCCCCCCC
TYGSDPGFMERDTWGARGEVAYDFSFATVTALLSYRDLDYGFGYDFDGGNPDPTSPGFNA
EECCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCE
INISGGNEETAELSSQELRFSSLPDSPVTWVVGLYRYNQDVLRTDSLILNADVIAPIELF
EEECCCCCHHHHHCHHHEEECCCCCCCCEEEEEEECCCCHHHCCCCEEEECCCCCHHHHH
DAFVADAELDSHAVFGDVSLPVTDKLTVFGGLRYSRDEKTQRVFNTDSNVPLRADDLFDA
HHHHHCCCCCCCEEEEEEECCCCCCEEEEECCEECCCHHHHHHHCCCCCCCEECHHHCCC
TASADFDDLTYRAGLEYQLTPDHMAYASVSRGFKSGGFNGEPSDAAAAVTPFDPEVAVQY
CCCCCCCCCHHHCCCEEEECCCHHHHHHHHCCHHCCCCCCCCCCCEEEECCCCCCEEEEE
EAGHKSLFLDGTLIWNNSVFYVDYTDLQTTQTNNGVRIITNAGEAHIQGYETQLQVSPAT
ECCCCEEEEEEEEEECCEEEEEEECCCEEEECCCCEEEEECCCCCEEECEEEEEEECCCC
NFNLAVAYAYTDAVFDEFVEDGVDYSGNQISRSPKHKVTVSPSYTLALANGPDLTFAVDY
CCEEEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCEEEEEEC
QYTSKIFDDNNNQPPELRDATSFVDARVVLDGLGNGMSVSLWGKNLTDERTRTFQGGFLG
CEEEHEECCCCCCCCCHHHHHHHHHHEEEEECCCCCCEEEEECCCCCCHHHHEECCCEEE
ANFGAFNPPRTYGVTLSWDY
CCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MKPLSIRLAAGACSLGVMAFCVATAHAQETMGQASGETAAAAEASQESARTLGTVTVTAQ
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEEEEEEEH
RRSESLQDVPVVVTVFGADEIAAARIQQIDDIVTRTPGLSFDAFPASQPRLYIRGIGSGD
HHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCC
RGASGDPSSAVFLDEVYLGRPSAVAFDAFDVERIEVLKGPQGTLYGRNVVGGAINVISKR
CCCCCCCCCEEEEEEECCCCCCEEEEECCCCEEEEEECCCCCCEECCCCCCCHHHHHCCC
PVLDSFGAGASATAGNYGRLDGAAFLNAPVAGNTGAVRVSGSYRSNDGYVENPFLGRDVD
CCHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCEECCCCEECCCCCCCCCC
DQETLSGRLQYYAEPTDSLRMHITLDGTRDRALGTANHVLELDETDPLSNFYAQNFDPDV
HHHHHCCEEEEEECCCCCEEEEEEECCCCCCCCCCCHHEEEECCCCCHHHHHHCCCCCCC
TYGSDPGFMERDTWGARGEVAYDFSFATVTALLSYRDLDYGFGYDFDGGNPDPTSPGFNA
EECCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCE
INISGGNEETAELSSQELRFSSLPDSPVTWVVGLYRYNQDVLRTDSLILNADVIAPIELF
EEECCCCCHHHHHCHHHEEECCCCCCCCEEEEEEECCCCHHHCCCCEEEECCCCCHHHHH
DAFVADAELDSHAVFGDVSLPVTDKLTVFGGLRYSRDEKTQRVFNTDSNVPLRADDLFDA
HHHHHCCCCCCCEEEEEEECCCCCCEEEEECCEECCCHHHHHHHCCCCCCCEECHHHCCC
TASADFDDLTYRAGLEYQLTPDHMAYASVSRGFKSGGFNGEPSDAAAAVTPFDPEVAVQY
CCCCCCCCCHHHCCCEEEECCCHHHHHHHHCCHHCCCCCCCCCCCEEEECCCCCCEEEEE
EAGHKSLFLDGTLIWNNSVFYVDYTDLQTTQTNNGVRIITNAGEAHIQGYETQLQVSPAT
ECCCCEEEEEEEEEECCEEEEEEECCCEEEECCCCEEEEECCCCCEEECEEEEEEECCCC
NFNLAVAYAYTDAVFDEFVEDGVDYSGNQISRSPKHKVTVSPSYTLALANGPDLTFAVDY
CCEEEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCEEEEEEC
QYTSKIFDDNNNQPPELRDATSFVDARVVLDGLGNGMSVSLWGKNLTDERTRTFQGGFLG
CEEEHEECCCCCCCCCHHHHHHHHHHEEEEECCCCCCEEEEECCCCCCHHHHEECCCEEE
ANFGAFNPPRTYGVTLSWDY
CCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA