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The map label for this gene is mmgC [H]

Identifier: 114797804

GI number: 114797804

Start: 2970738

End: 2971898

Strand: Reverse

Name: mmgC [H]

Synonym: HNE_2810

Alternate gene names: 114797804

Gene position: 2971898-2970738 (Counterclockwise)

Preceding gene: 114797546

Following gene: 114799425

Centisome position: 80.21

GC content: 62.45

Gene sequence:

>1161_bases
ATGGCCTTCGACGCCGAAACCCGCGCCGCGCTGATCGATCAGGTCCGCCGATTTGTCACTGAAACCTGCGTACCGGTAGA
GGCCCAGGTGGGGGATGAAGACGCCGTTCCCCAGCATGTGGTCGACGCCATGAAAGAGCTTGGCCTGTTCGGCATCGCTG
TGCCGGAGGAATATGGCGGCCTCGACCTCGACATGGAAACCGAATGCCTCGTCGCCATGGAACTCGGCCAGACATCTCCG
GCTTTCCGCTCGGTGGCCGGCACCAATATCGGCATCGGCAGCCAGGCGCTCATTCTCTTCGGCACCGAGGAGCAGAAACA
GAAATGGCTGCCCGGCGTCGCCTCCGGCGACCTGATCGCGAGCTTTGCGCTGACCGAGCCCGAAGCCGGTTCTGACGCTG
CCGGCCTCAAGACGAAGGCTGTGCGCGACGGCGATCATTACATTCTCAACGGCACCAAGCGCTACATCACCAATGCCAAC
AAGGCTGACCTCTTCACGGTCATGGCGCGGACAAATCAGGACGAGCCCGGCGCCAAAGGTGTCTCCGCCTTCATCGTCGA
GCGCGACACGCCCGGACTGTCGGTCGGCAAGCCCGAGAAGAAGATGGGCCAGCAGGGCGCCCATATCTGTGACGTGATCT
TCGAAAACGCCCGCGTGCCTGCCGCCAACATGATCGCCAAGGAAGGCGAAGGCTTTAAAGTCGCCATGAGCGTGCTGGAT
AAAGGCCGCCTCCACATCTCGGCTGTGGCGACCGGCGTTTCCAAACGCCTGATCCGCGAGATGGTGAATTATTCGCTGGA
GCGCAAACAGTTCGGCAAGCCGATCTTCGAGCACCAGATGCTCCAGGCCCTGATCGCTGACAGCCAGGCGGAAACCTATG
CGGCCGAATGCATGATCATGGACGCCGCCCGCCGCCGCGACGCAGGCGAAGATATCACCATGCTCGCCTCCTGCACCAAG
CTCTTCGCCACCGAGGCCTGCGGCCGCGTGGCTGACCGCGCCGTGCAGATCTTCGGCGGGGCAGGGTACGTCTCCGATTA
CGGCATCGAACGGTTCTACCGCGATGTGCGCATCTTCCGCCTCTATGAAGGCACCAGCCAGATCCAGCAGATCATCATCG
CGCGCGAACTGGCCCGCGCCGCCAAAGCAGGAAAACTCTGA

Upstream 100 bases:

>100_bases
CTTGATTGACTGCGGCACCTTACCCGCATGCGCCCCTTCGACAAGCGCTCCAATGGCGCATAAAGTATCTGCCGAAGAGG
AAACCGGGAGACGAAACAAG

Downstream 100 bases:

>100_bases
TGTTTGAACATGACATGGCCGACCCCGGCGAAGTGGGTATGAATGCTGAGCGGCTCGCCGCGATTCCGGAGTTCTTCCAG
AAGAACTATCTCGACAGCGG

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MAFDAETRAALIDQVRRFVTETCVPVEAQVGDEDAVPQHVVDAMKELGLFGIAVPEEYGGLDLDMETECLVAMELGQTSP
AFRSVAGTNIGIGSQALILFGTEEQKQKWLPGVASGDLIASFALTEPEAGSDAAGLKTKAVRDGDHYILNGTKRYITNAN
KADLFTVMARTNQDEPGAKGVSAFIVERDTPGLSVGKPEKKMGQQGAHICDVIFENARVPAANMIAKEGEGFKVAMSVLD
KGRLHISAVATGVSKRLIREMVNYSLERKQFGKPIFEHQMLQALIADSQAETYAAECMIMDAARRRDAGEDITMLASCTK
LFATEACGRVADRAVQIFGGAGYVSDYGIERFYRDVRIFRLYEGTSQIQQIIIARELARAAKAGKL

Sequences:

>Translated_386_residues
MAFDAETRAALIDQVRRFVTETCVPVEAQVGDEDAVPQHVVDAMKELGLFGIAVPEEYGGLDLDMETECLVAMELGQTSP
AFRSVAGTNIGIGSQALILFGTEEQKQKWLPGVASGDLIASFALTEPEAGSDAAGLKTKAVRDGDHYILNGTKRYITNAN
KADLFTVMARTNQDEPGAKGVSAFIVERDTPGLSVGKPEKKMGQQGAHICDVIFENARVPAANMIAKEGEGFKVAMSVLD
KGRLHISAVATGVSKRLIREMVNYSLERKQFGKPIFEHQMLQALIADSQAETYAAECMIMDAARRRDAGEDITMLASCTK
LFATEACGRVADRAVQIFGGAGYVSDYGIERFYRDVRIFRLYEGTSQIQQIIIARELARAAKAGKL
>Mature_385_residues
AFDAETRAALIDQVRRFVTETCVPVEAQVGDEDAVPQHVVDAMKELGLFGIAVPEEYGGLDLDMETECLVAMELGQTSPA
FRSVAGTNIGIGSQALILFGTEEQKQKWLPGVASGDLIASFALTEPEAGSDAAGLKTKAVRDGDHYILNGTKRYITNANK
ADLFTVMARTNQDEPGAKGVSAFIVERDTPGLSVGKPEKKMGQQGAHICDVIFENARVPAANMIAKEGEGFKVAMSVLDK
GRLHISAVATGVSKRLIREMVNYSLERKQFGKPIFEHQMLQALIADSQAETYAAECMIMDAARRRDAGEDITMLASCTKL
FATEACGRVADRAVQIFGGAGYVSDYGIERFYRDVRIFRLYEGTSQIQQIIIARELARAAKAGKL

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557231, Length=363, Percent_Identity=38.8429752066116, Blast_Score=268, Evalue=7e-72,
Organism=Homo sapiens, GI187960098, Length=363, Percent_Identity=38.8429752066116, Blast_Score=267, Evalue=1e-71,
Organism=Homo sapiens, GI21361497, Length=368, Percent_Identity=40.2173913043478, Blast_Score=266, Evalue=3e-71,
Organism=Homo sapiens, GI4557233, Length=378, Percent_Identity=38.0952380952381, Blast_Score=259, Evalue=2e-69,
Organism=Homo sapiens, GI4557235, Length=371, Percent_Identity=37.466307277628, Blast_Score=253, Evalue=2e-67,
Organism=Homo sapiens, GI76496475, Length=371, Percent_Identity=37.466307277628, Blast_Score=253, Evalue=2e-67,
Organism=Homo sapiens, GI4501859, Length=363, Percent_Identity=36.0881542699724, Blast_Score=248, Evalue=5e-66,
Organism=Homo sapiens, GI7656849, Length=367, Percent_Identity=37.6021798365123, Blast_Score=236, Evalue=3e-62,
Organism=Homo sapiens, GI226958412, Length=375, Percent_Identity=33.6, Blast_Score=225, Evalue=4e-59,
Organism=Homo sapiens, GI226958414, Length=363, Percent_Identity=33.8842975206612, Blast_Score=225, Evalue=6e-59,
Organism=Homo sapiens, GI4501857, Length=373, Percent_Identity=32.4396782841823, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI38505218, Length=399, Percent_Identity=29.3233082706767, Blast_Score=159, Evalue=3e-39,
Organism=Homo sapiens, GI48976061, Length=395, Percent_Identity=30.126582278481, Blast_Score=157, Evalue=1e-38,
Organism=Homo sapiens, GI211971008, Length=395, Percent_Identity=30.126582278481, Blast_Score=157, Evalue=1e-38,
Organism=Homo sapiens, GI4503943, Length=370, Percent_Identity=28.1081081081081, Blast_Score=152, Evalue=7e-37,
Organism=Homo sapiens, GI7669494, Length=356, Percent_Identity=27.8089887640449, Blast_Score=141, Evalue=1e-33,
Organism=Escherichia coli, GI87081958, Length=378, Percent_Identity=30.1587301587302, Blast_Score=167, Evalue=1e-42,
Organism=Escherichia coli, GI1786223, Length=350, Percent_Identity=29.7142857142857, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI87081702, Length=352, Percent_Identity=26.9886363636364, Blast_Score=82, Evalue=9e-17,
Organism=Escherichia coli, GI87082384, Length=286, Percent_Identity=24.4755244755245, Blast_Score=80, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17570075, Length=383, Percent_Identity=41.2532637075718, Blast_Score=283, Evalue=1e-76,
Organism=Caenorhabditis elegans, GI17569725, Length=382, Percent_Identity=39.5287958115183, Blast_Score=262, Evalue=2e-70,
Organism=Caenorhabditis elegans, GI17534899, Length=380, Percent_Identity=37.8947368421053, Blast_Score=259, Evalue=2e-69,
Organism=Caenorhabditis elegans, GI71985184, Length=356, Percent_Identity=40.1685393258427, Blast_Score=254, Evalue=6e-68,
Organism=Caenorhabditis elegans, GI17508101, Length=371, Percent_Identity=35.3099730458221, Blast_Score=246, Evalue=1e-65,
Organism=Caenorhabditis elegans, GI17506239, Length=370, Percent_Identity=36.4864864864865, Blast_Score=243, Evalue=1e-64,
Organism=Caenorhabditis elegans, GI17533517, Length=372, Percent_Identity=31.1827956989247, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI17538396, Length=373, Percent_Identity=30.8310991957105, Blast_Score=207, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI71985192, Length=279, Percent_Identity=40.8602150537634, Blast_Score=204, Evalue=7e-53,
Organism=Caenorhabditis elegans, GI17551932, Length=377, Percent_Identity=31.2997347480106, Blast_Score=189, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI17505929, Length=381, Percent_Identity=29.6587926509186, Blast_Score=181, Evalue=5e-46,
Organism=Caenorhabditis elegans, GI71990804, Length=321, Percent_Identity=32.7102803738318, Blast_Score=180, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI32563615, Length=231, Percent_Identity=38.961038961039, Blast_Score=172, Evalue=2e-43,
Organism=Caenorhabditis elegans, GI17534353, Length=379, Percent_Identity=27.9683377308707, Blast_Score=159, Evalue=3e-39,
Organism=Caenorhabditis elegans, GI71982178, Length=267, Percent_Identity=31.8352059925094, Blast_Score=149, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI17531909, Length=240, Percent_Identity=34.1666666666667, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI17562446, Length=298, Percent_Identity=30.5369127516779, Blast_Score=121, Evalue=5e-28,
Organism=Caenorhabditis elegans, GI86563383, Length=331, Percent_Identity=23.2628398791541, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI86563381, Length=331, Percent_Identity=23.2628398791541, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17531913, Length=174, Percent_Identity=29.8850574712644, Blast_Score=82, Evalue=6e-16,
Organism=Drosophila melanogaster, GI24660351, Length=379, Percent_Identity=40.1055408970976, Blast_Score=288, Evalue=5e-78,
Organism=Drosophila melanogaster, GI281363737, Length=395, Percent_Identity=38.7341772151899, Blast_Score=270, Evalue=1e-72,
Organism=Drosophila melanogaster, GI21356377, Length=370, Percent_Identity=38.1081081081081, Blast_Score=252, Evalue=2e-67,
Organism=Drosophila melanogaster, GI24666513, Length=375, Percent_Identity=37.0666666666667, Blast_Score=250, Evalue=1e-66,
Organism=Drosophila melanogaster, GI24646207, Length=380, Percent_Identity=36.5789473684211, Blast_Score=234, Evalue=6e-62,
Organism=Drosophila melanogaster, GI21355753, Length=380, Percent_Identity=31.8421052631579, Blast_Score=203, Evalue=2e-52,
Organism=Drosophila melanogaster, GI19920834, Length=376, Percent_Identity=27.9255319148936, Blast_Score=147, Evalue=1e-35,
Organism=Drosophila melanogaster, GI24652780, Length=330, Percent_Identity=24.5454545454545, Blast_Score=86, Evalue=5e-17,
Organism=Drosophila melanogaster, GI45550141, Length=317, Percent_Identity=23.9747634069401, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI221473076, Length=317, Percent_Identity=23.9747634069401, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 41855; Mature: 41724

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: PS00072 ACYL_COA_DH_1 ; PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFDAETRAALIDQVRRFVTETCVPVEAQVGDEDAVPQHVVDAMKELGLFGIAVPEEYGG
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCHHHCC
LDLDMETECLVAMELGQTSPAFRSVAGTNIGIGSQALILFGTEEQKQKWLPGVASGDLIA
CCCCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCEEEEECCCHHHHHCCCCCCCCCHHE
SFALTEPEAGSDAAGLKTKAVRDGDHYILNGTKRYITNANKADLFTVMARTNQDEPGAKG
EEEECCCCCCCCCCCCCHHEEECCCEEEECCCHHHHCCCCCHHEEEEEECCCCCCCCCCC
VSAFIVERDTPGLSVGKPEKKMGQQGAHICDVIFENARVPAANMIAKEGEGFKVAMSVLD
CEEEEEECCCCCCCCCCCHHHHHHCCCHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHH
KGRLHISAVATGVSKRLIREMVNYSLERKQFGKPIFEHQMLQALIADSQAETYAAECMIM
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHH
DAARRRDAGEDITMLASCTKLFATEACGRVADRAVQIFGGAGYVSDYGIERFYRDVRIFR
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEE
LYEGTSQIQQIIIARELARAAKAGKL
EECCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AFDAETRAALIDQVRRFVTETCVPVEAQVGDEDAVPQHVVDAMKELGLFGIAVPEEYGG
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCHHHCC
LDLDMETECLVAMELGQTSPAFRSVAGTNIGIGSQALILFGTEEQKQKWLPGVASGDLIA
CCCCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCEEEEECCCHHHHHCCCCCCCCCHHE
SFALTEPEAGSDAAGLKTKAVRDGDHYILNGTKRYITNANKADLFTVMARTNQDEPGAKG
EEEECCCCCCCCCCCCCHHEEECCCEEEECCCHHHHCCCCCHHEEEEEECCCCCCCCCCC
VSAFIVERDTPGLSVGKPEKKMGQQGAHICDVIFENARVPAANMIAKEGEGFKVAMSVLD
CEEEEEECCCCCCCCCCCHHHHHHCCCHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHH
KGRLHISAVATGVSKRLIREMVNYSLERKQFGKPIFEHQMLQALIADSQAETYAAECMIM
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHH
DAARRRDAGEDITMLASCTKLFATEACGRVADRAVQIFGGAGYVSDYGIERFYRDVRIFR
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEE
LYEGTSQIQQIIIARELARAAKAGKL
EECCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]