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The map label for this gene is arnC [H]

Identifier: 114797767

GI number: 114797767

Start: 34988

End: 35737

Strand: Reverse

Name: arnC [H]

Synonym: HNE_0043

Alternate gene names: 114797767

Gene position: 35737-34988 (Counterclockwise)

Preceding gene: 114798586

Following gene: 114798513

Centisome position: 0.96

GC content: 61.6

Gene sequence:

>750_bases
ATGAGCCAAGCGCCTCAGCTCTCCGTCCTGATCCCCTTCTTCAATGAAGCCGGAAACATCCATCCTGTGATCGAGGAGGT
GCATGCCGCCCTTGCCGGGATCGATTTCGAGATCGTGTGCGTCAATGATTGTTCGGGAGATACGACCGGGGCCGAACTGG
CCGAGGCAAAGGCGAAATATCCTGCCACCGTAACCGTGCTGACCCATATTCAGCGACGCGGAAAATCTGCTGCGCTGTTC
ACGGGCCTCAAATCCGTTCGCGGAGCGTGGGTGCAGCTGCTGGACGGCGACGGGCAGAACGACCCGGCCGACACCGCGCG
CCTATGGAAGGATATCATTGCGCCCGGCGCGCCTGCGCGTCTGGGCATCATCGCGGGCAAGCGTAACAGCCGGAACGATT
CCGGCTTCAAATGGGTTCAGTCGCGCGTGGCCAATGGCGTGCGGCGGTTTGTGCTTCAGGATGACGCCAAGGATACCGGA
TGCGGATGGAAACTGATCCGGACCTCTGCGTTCCGGGATCTTCCCTTCTTTGCCTCGATGCACAGGTTCCTCCCGGCGCT
GATCAAACGGGCCGGATGGGATGTGCGCGAAGAGATGGTGAATGACCGCCCGCGCCTGGCCGGGCAATCCAAATATGGAT
TCCTCGGCCGCCTTGGCGCGGGGGTGTTTGACCTGATCGGCATGTTCTGGCTGATCCGGCGTGGCGGCTATGGCGTTGCC
GCAGAATGGAATGATCCGCGCGCGGAGTGA

Upstream 100 bases:

>100_bases
TCGCAACGCCGGGCGTCTGCCGAACCCGCCCGTGGCTGAGGAAGGCTGACACGCCCCCCGATTTGCGGTTAAGAGGCAAA
AGTACAAACAAGGCTGCCCC

Downstream 100 bases:

>100_bases
CGCGCGCGGTTAATCCTGCGCGCTGCCAGGCCGGCGGCCACCCCGGCCACCTCCCCCATCGCCGCTCCGGCCGCGCGGAC
GCTCGACCCGCGGTGGCGGC

Product: glycosyl transferase group 2 family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MSQAPQLSVLIPFFNEAGNIHPVIEEVHAALAGIDFEIVCVNDCSGDTTGAELAEAKAKYPATVTVLTHIQRRGKSAALF
TGLKSVRGAWVQLLDGDGQNDPADTARLWKDIIAPGAPARLGIIAGKRNSRNDSGFKWVQSRVANGVRRFVLQDDAKDTG
CGWKLIRTSAFRDLPFFASMHRFLPALIKRAGWDVREEMVNDRPRLAGQSKYGFLGRLGAGVFDLIGMFWLIRRGGYGVA
AEWNDPRAE

Sequences:

>Translated_249_residues
MSQAPQLSVLIPFFNEAGNIHPVIEEVHAALAGIDFEIVCVNDCSGDTTGAELAEAKAKYPATVTVLTHIQRRGKSAALF
TGLKSVRGAWVQLLDGDGQNDPADTARLWKDIIAPGAPARLGIIAGKRNSRNDSGFKWVQSRVANGVRRFVLQDDAKDTG
CGWKLIRTSAFRDLPFFASMHRFLPALIKRAGWDVREEMVNDRPRLAGQSKYGFLGRLGAGVFDLIGMFWLIRRGGYGVA
AEWNDPRAE
>Mature_248_residues
SQAPQLSVLIPFFNEAGNIHPVIEEVHAALAGIDFEIVCVNDCSGDTTGAELAEAKAKYPATVTVLTHIQRRGKSAALFT
GLKSVRGAWVQLLDGDGQNDPADTARLWKDIIAPGAPARLGIIAGKRNSRNDSGFKWVQSRVANGVRRFVLQDDAKDTGC
GWKLIRTSAFRDLPFFASMHRFLPALIKRAGWDVREEMVNDRPRLAGQSKYGFLGRLGAGVFDLIGMFWLIRRGGYGVAA
EWNDPRAE

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788588, Length=224, Percent_Identity=26.7857142857143, Blast_Score=73, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 27294; Mature: 27163

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQAPQLSVLIPFFNEAGNIHPVIEEVHAALAGIDFEIVCVNDCSGDTTGAELAEAKAKY
CCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHCC
PATVTVLTHIQRRGKSAALFTGLKSVRGAWVQLLDGDGQNDPADTARLWKDIIAPGAPAR
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHCCCCCCE
LGIIAGKRNSRNDSGFKWVQSRVANGVRRFVLQDDAKDTGCGWKLIRTSAFRDLPFFASM
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHH
HRFLPALIKRAGWDVREEMVNDRPRLAGQSKYGFLGRLGAGVFDLIGMFWLIRRGGYGVA
HHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEE
AEWNDPRAE
ECCCCCCCC
>Mature Secondary Structure 
SQAPQLSVLIPFFNEAGNIHPVIEEVHAALAGIDFEIVCVNDCSGDTTGAELAEAKAKY
CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHCC
PATVTVLTHIQRRGKSAALFTGLKSVRGAWVQLLDGDGQNDPADTARLWKDIIAPGAPAR
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHCCCCCCE
LGIIAGKRNSRNDSGFKWVQSRVANGVRRFVLQDDAKDTGCGWKLIRTSAFRDLPFFASM
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHH
HRFLPALIKRAGWDVREEMVNDRPRLAGQSKYGFLGRLGAGVFDLIGMFWLIRRGGYGVA
HHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEE
AEWNDPRAE
ECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA