Click here to switch to the map view.

The map label for this gene is copC

Identifier: 114797680

GI number: 114797680

Start: 1748245

End: 1748598

Strand: Reverse

Name: copC

Synonym: HNE_1705

Alternate gene names: NA

Gene position: 1748598-1748245 (Counterclockwise)

Preceding gene: 114799827

Following gene: 114798187

Centisome position: 47.2

GC content: 57.06

Gene sequence:

>354_bases
ATGCACACGCCCAAATTAATCGCCGCAACACTTCTGGCGCTCGCTCTCTCAGCTGCTCCCGCGCTTGCCCACATCAGTGT
CAAATCGACGAGCATCGAGAATGCGGCCGTCATCGACTCCGCTCCTGCAGACTTCTCGTTCAGCTTCAGCCAGCCGGTCG
GTCTGATATCATTCTCTATCCAGACACAGGCCGGAGAAAAGGTCGATCTCGGATTCACGCCGCCAAAAGCACCGGCAGCC
ACATTCACGGTGCCGCTGCCGGAACTCGCGCCAGGTCTCTACACCGTCGAATGGCGTACGATGTCGAAGGATGGTCATCC
GATGACCGGCAAATCGACTTTCGAACTGAAATAG

Upstream 100 bases:

>100_bases
CCCGTGGAGGAGACACAGAAACCCTCTCCTTCGTCACCGGCATCAGGCTCTGGTTCTGAAGCGTATCTAATTGAAACTCT
CGGTCCGGAAAGGACATCTC

Downstream 100 bases:

>100_bases
GCCGGACCCATATGCCCCTGCTGGACGCCGCCAATCTTGCAACCAAGATCCTGCTGTATGGCGCCAGCCTCGCAGCGATC
GGGGCGGCGCTTCACGGGGC

Product: copper resistance protein CopC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MHTPKLIAATLLALALSAAPALAHISVKSTSIENAAVIDSAPADFSFSFSQPVGLISFSIQTQAGEKVDLGFTPPKAPAA
TFTVPLPELAPGLYTVEWRTMSKDGHPMTGKSTFELK

Sequences:

>Translated_117_residues
MHTPKLIAATLLALALSAAPALAHISVKSTSIENAAVIDSAPADFSFSFSQPVGLISFSIQTQAGEKVDLGFTPPKAPAA
TFTVPLPELAPGLYTVEWRTMSKDGHPMTGKSTFELK
>Mature_117_residues
MHTPKLIAATLLALALSAAPALAHISVKSTSIENAAVIDSAPADFSFSFSQPVGLISFSIQTQAGEKVDLGFTPPKAPAA
TFTVPLPELAPGLYTVEWRTMSKDGHPMTGKSTFELK

Specific function: Unknown

COG id: COG2372

COG function: function code R; Uncharacterized protein, homolog of Cu resistance protein CopC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12268; Mature: 12268

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTPKLIAATLLALALSAAPALAHISVKSTSIENAAVIDSAPADFSFSFSQPVGLISFSI
CCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCCCCCEEECCCCCEEEEEEE
QTQAGEKVDLGFTPPKAPAATFTVPLPELAPGLYTVEWRTMSKDGHPMTGKSTFELK
ECCCCCEEECCCCCCCCCCEEEEEECHHHCCCEEEEEEEEECCCCCCCCCCEEEEEC
>Mature Secondary Structure
MHTPKLIAATLLALALSAAPALAHISVKSTSIENAAVIDSAPADFSFSFSQPVGLISFSI
CCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCCCCCEEECCCCCEEEEEEE
QTQAGEKVDLGFTPPKAPAATFTVPLPELAPGLYTVEWRTMSKDGHPMTGKSTFELK
ECCCCCEEECCCCCCCCCCEEEEEECHHHCCCEEEEEEEEECCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA