| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797661
Identifier: 114797661
GI number: 114797661
Start: 2025065
End: 2025889
Strand: Reverse
Name: 114797661
Synonym: HNE_1955
Alternate gene names: NA
Gene position: 2025889-2025065 (Counterclockwise)
Preceding gene: 114798436
Following gene: 114797734
Centisome position: 54.68
GC content: 57.7
Gene sequence:
>825_bases TTGGCCATTCCGTCCATAGCAGCAGTTCGCAAGACCCTCATCGCGCGGCCGGGCAAGCCATTCGAGATCAAGGATCGGCC GACCGCCGATCGCGAGTTGTTTGACGACAAGGAAGAGGCCAAGACCAGCCTCAAGAAGGATGCGGCCTGCATCAATGACC TGAAAGACAAGCTTTATGCCGAGGGCAAGCGCGCGCTGCTTGTTGTGTTGCAAGGTATGGATACGGCGGGGAAGTCGGGC ACCATCAAATCTGTTTTCGCTGACACAACGCCGCTCGGCATGGAAGTGAAGGCATTCAAGGCGCCGAGCAGTGAGGAAAT GGCGCGCGACTATCTTTGGCGCGTTCACAACGCAGTGCCCCGGCGGGGGCATGTCGGCATTTTCGACCGGTCACATTATG AGGATGTGCTGGTGGCGAAAGTGCGTGGCTTTGCCCCGGCAGACGCCATTGAGCAGCGTTACAGCCAGATCAACGCGTTT GAGAAGCACCTCTCGGAGAACGGCTACACGATCGTCAAATGCATGCTGAACATCGGCTATGAGGAACAGGGTATCCGCCT CAAGGAGCGCCTGGTTGAGCCGCACAAGCTGTGGAAGTTTAATCCGGGCGATCTTGATGATCGTTCGCTCTGGCCACAAT TCATGCAGGCCTATGAGACCGCTGTTACACGGTGCTCCACCAAGCATTCCCCCTGGTACGTCATTCCCGCTGACAGCAGA ACGCGCCGCAATGCGATGATTGCGCGTCTCGTGCGAGGCGCGCTGGAGGACATGGACCTCAAATGGAAAGACCCCGGACT TGATCCGGGGTCCTACGAGATTTGA
Upstream 100 bases:
>100_bases GGTGGTCGAGTTCTACTCCTCGTAAGAGACCTGTTTTTCTTGTACTTTCGGGAAGGCCGCGCCAGACTGGTGCGGCCTTT TCATTTTCGGGGAGATCTCC
Downstream 100 bases:
>100_bases AAGTACAATCAGACGCGTGATGTTCAGTTGAACGACACGTCTCCGCCGCTGGACTCTCTGGCCTCCTTTTGCGCCGGCGC GCCATCAAAGGAGACGTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: URF2 [H]
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MAIPSIAAVRKTLIARPGKPFEIKDRPTADRELFDDKEEAKTSLKKDAACINDLKDKLYAEGKRALLVVLQGMDTAGKSG TIKSVFADTTPLGMEVKAFKAPSSEEMARDYLWRVHNAVPRRGHVGIFDRSHYEDVLVAKVRGFAPADAIEQRYSQINAF EKHLSENGYTIVKCMLNIGYEEQGIRLKERLVEPHKLWKFNPGDLDDRSLWPQFMQAYETAVTRCSTKHSPWYVIPADSR TRRNAMIARLVRGALEDMDLKWKDPGLDPGSYEI
Sequences:
>Translated_274_residues MAIPSIAAVRKTLIARPGKPFEIKDRPTADRELFDDKEEAKTSLKKDAACINDLKDKLYAEGKRALLVVLQGMDTAGKSG TIKSVFADTTPLGMEVKAFKAPSSEEMARDYLWRVHNAVPRRGHVGIFDRSHYEDVLVAKVRGFAPADAIEQRYSQINAF EKHLSENGYTIVKCMLNIGYEEQGIRLKERLVEPHKLWKFNPGDLDDRSLWPQFMQAYETAVTRCSTKHSPWYVIPADSR TRRNAMIARLVRGALEDMDLKWKDPGLDPGSYEI >Mature_273_residues AIPSIAAVRKTLIARPGKPFEIKDRPTADRELFDDKEEAKTSLKKDAACINDLKDKLYAEGKRALLVVLQGMDTAGKSGT IKSVFADTTPLGMEVKAFKAPSSEEMARDYLWRVHNAVPRRGHVGIFDRSHYEDVLVAKVRGFAPADAIEQRYSQINAFE KHLSENGYTIVKCMLNIGYEEQGIRLKERLVEPHKLWKFNPGDLDDRSLWPQFMQAYETAVTRCSTKHSPWYVIPADSRT RRNAMIARLVRGALEDMDLKWKDPGLDPGSYEI
Specific function: Unknown
COG id: COG2326
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011993 - InterPro: IPR022488 [H]
Pfam domain/function: PF03976 PPK2 [H]
EC number: NA
Molecular weight: Translated: 31084; Mature: 30953
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIPSIAAVRKTLIARPGKPFEIKDRPTADRELFDDKEEAKTSLKKDAACINDLKDKLYA CCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH EGKRALLVVLQGMDTAGKSGTIKSVFADTTPLGMEVKAFKAPSSEEMARDYLWRVHNAVP CCCCEEEEEEECCCCCCCCCCHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCC RRGHVGIFDRSHYEDVLVAKVRGFAPADAIEQRYSQINAFEKHLSENGYTIVKCMLNIGY CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCC EEQGIRLKERLVEPHKLWKFNPGDLDDRSLWPQFMQAYETAVTRCSTKHSPWYVIPADSR CCCCCHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC TRRNAMIARLVRGALEDMDLKWKDPGLDPGSYEI HHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCC >Mature Secondary Structure AIPSIAAVRKTLIARPGKPFEIKDRPTADRELFDDKEEAKTSLKKDAACINDLKDKLYA CCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH EGKRALLVVLQGMDTAGKSGTIKSVFADTTPLGMEVKAFKAPSSEEMARDYLWRVHNAVP CCCCEEEEEEECCCCCCCCCCHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCC RRGHVGIFDRSHYEDVLVAKVRGFAPADAIEQRYSQINAFEKHLSENGYTIVKCMLNIGY CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCC EEQGIRLKERLVEPHKLWKFNPGDLDDRSLWPQFMQAYETAVTRCSTKHSPWYVIPADSR CCCCCHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC TRRNAMIARLVRGALEDMDLKWKDPGLDPGSYEI HHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8199775 [H]