Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114797631

Identifier: 114797631

GI number: 114797631

Start: 2968855

End: 2969232

Strand: Reverse

Name: 114797631

Synonym: HNE_2806

Alternate gene names: NA

Gene position: 2969232-2968855 (Counterclockwise)

Preceding gene: 114798438

Following gene: 114797304

Centisome position: 80.14

GC content: 60.05

Gene sequence:

>378_bases
ATGGCAAAGGCGCCCGACCCCCTTCATGAATTTGTGCTGGAACTGCTCTCGGGCGCCGGGGCGATCAACATCCGGCGAAT
GTTCGGTGGCGCCGGGGTGTATCAGGACGGGGTAATGTTTGCTCTGCTCTCGGATGACCAGATCTATGTGAAAGTGGACC
CGGCGCTACGCGCTGATCTTCTGGCGGAAGGCGGCGCGCCGTTCCTCTATCTCCGCTCAAGCGATGCCAAGCCTATTGAT
CTGGGCTATGTCAGTCTGCCCTCATCTGCGATGGATGATCCCGATGAGGCGACGGTGTGGGCTAGGCGGGCGCTCACCGC
AGCGCGGGCGGCAAAGGCCAAAAGCCCGCCAAAGAAGCGTAAAACCAAATCAGATTGA

Upstream 100 bases:

>100_bases
CTCATCGCCATCTACCGCAAAGGCAAGCCGGTGGAAGACCCGGACACCTTCAAGGGGGTGTATCGTCTGGGGCTGCCGGC
CTGAGGGCGCTTGAGACTTC

Downstream 100 bases:

>100_bases
GTTCAGGCGACGGCGGGACGCGCGGTTGGTTGATCCAGAGAAAAGGCGTAGTCGGACGATCCGTTCTGGCGCAGGTGCTG
GAGGCGTTGAAAGCCATCCT

Product: TfoX domain-containing protein

Products: NA

Alternate protein names: TfoX-Like Protein; TfoX N-Terminal; Regulator Of Competence-Specific Genes Homologue Protein; TfoX Domain Protein; TfoX-Like; TfoX N-Terminal Domain Superfamily

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MAKAPDPLHEFVLELLSGAGAINIRRMFGGAGVYQDGVMFALLSDDQIYVKVDPALRADLLAEGGAPFLYLRSSDAKPID
LGYVSLPSSAMDDPDEATVWARRALTAARAAKAKSPPKKRKTKSD

Sequences:

>Translated_125_residues
MAKAPDPLHEFVLELLSGAGAINIRRMFGGAGVYQDGVMFALLSDDQIYVKVDPALRADLLAEGGAPFLYLRSSDAKPID
LGYVSLPSSAMDDPDEATVWARRALTAARAAKAKSPPKKRKTKSD
>Mature_124_residues
AKAPDPLHEFVLELLSGAGAINIRRMFGGAGVYQDGVMFALLSDDQIYVKVDPALRADLLAEGGAPFLYLRSSDAKPIDL
GYVSLPSSAMDDPDEATVWARRALTAARAAKAKSPPKKRKTKSD

Specific function: Unknown

COG id: COG3070

COG function: function code K; Regulator of competence-specific genes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13406; Mature: 13274

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKAPDPLHEFVLELLSGAGAINIRRMFGGAGVYQDGVMFALLSDDQIYVKVDPALRADL
CCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEECCCEEEEEECCHHHHHH
LAEGGAPFLYLRSSDAKPIDLGYVSLPSSAMDDPDEATVWARRALTAARAAKAKSPPKKR
HHCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
KTKSD
CCCCC
>Mature Secondary Structure 
AKAPDPLHEFVLELLSGAGAINIRRMFGGAGVYQDGVMFALLSDDQIYVKVDPALRADL
CCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEECCCEEEEEECCHHHHHH
LAEGGAPFLYLRSSDAKPIDLGYVSLPSSAMDDPDEATVWARRALTAARAAKAKSPPKKR
HHCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
KTKSD
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA