| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797631
Identifier: 114797631
GI number: 114797631
Start: 2968855
End: 2969232
Strand: Reverse
Name: 114797631
Synonym: HNE_2806
Alternate gene names: NA
Gene position: 2969232-2968855 (Counterclockwise)
Preceding gene: 114798438
Following gene: 114797304
Centisome position: 80.14
GC content: 60.05
Gene sequence:
>378_bases ATGGCAAAGGCGCCCGACCCCCTTCATGAATTTGTGCTGGAACTGCTCTCGGGCGCCGGGGCGATCAACATCCGGCGAAT GTTCGGTGGCGCCGGGGTGTATCAGGACGGGGTAATGTTTGCTCTGCTCTCGGATGACCAGATCTATGTGAAAGTGGACC CGGCGCTACGCGCTGATCTTCTGGCGGAAGGCGGCGCGCCGTTCCTCTATCTCCGCTCAAGCGATGCCAAGCCTATTGAT CTGGGCTATGTCAGTCTGCCCTCATCTGCGATGGATGATCCCGATGAGGCGACGGTGTGGGCTAGGCGGGCGCTCACCGC AGCGCGGGCGGCAAAGGCCAAAAGCCCGCCAAAGAAGCGTAAAACCAAATCAGATTGA
Upstream 100 bases:
>100_bases CTCATCGCCATCTACCGCAAAGGCAAGCCGGTGGAAGACCCGGACACCTTCAAGGGGGTGTATCGTCTGGGGCTGCCGGC CTGAGGGCGCTTGAGACTTC
Downstream 100 bases:
>100_bases GTTCAGGCGACGGCGGGACGCGCGGTTGGTTGATCCAGAGAAAAGGCGTAGTCGGACGATCCGTTCTGGCGCAGGTGCTG GAGGCGTTGAAAGCCATCCT
Product: TfoX domain-containing protein
Products: NA
Alternate protein names: TfoX-Like Protein; TfoX N-Terminal; Regulator Of Competence-Specific Genes Homologue Protein; TfoX Domain Protein; TfoX-Like; TfoX N-Terminal Domain Superfamily
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MAKAPDPLHEFVLELLSGAGAINIRRMFGGAGVYQDGVMFALLSDDQIYVKVDPALRADLLAEGGAPFLYLRSSDAKPID LGYVSLPSSAMDDPDEATVWARRALTAARAAKAKSPPKKRKTKSD
Sequences:
>Translated_125_residues MAKAPDPLHEFVLELLSGAGAINIRRMFGGAGVYQDGVMFALLSDDQIYVKVDPALRADLLAEGGAPFLYLRSSDAKPID LGYVSLPSSAMDDPDEATVWARRALTAARAAKAKSPPKKRKTKSD >Mature_124_residues AKAPDPLHEFVLELLSGAGAINIRRMFGGAGVYQDGVMFALLSDDQIYVKVDPALRADLLAEGGAPFLYLRSSDAKPIDL GYVSLPSSAMDDPDEATVWARRALTAARAAKAKSPPKKRKTKSD
Specific function: Unknown
COG id: COG3070
COG function: function code K; Regulator of competence-specific genes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13406; Mature: 13274
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKAPDPLHEFVLELLSGAGAINIRRMFGGAGVYQDGVMFALLSDDQIYVKVDPALRADL CCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEECCCEEEEEECCHHHHHH LAEGGAPFLYLRSSDAKPIDLGYVSLPSSAMDDPDEATVWARRALTAARAAKAKSPPKKR HHCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC KTKSD CCCCC >Mature Secondary Structure AKAPDPLHEFVLELLSGAGAINIRRMFGGAGVYQDGVMFALLSDDQIYVKVDPALRADL CCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEECCCEEEEEECCHHHHHH LAEGGAPFLYLRSSDAKPIDLGYVSLPSSAMDDPDEATVWARRALTAARAAKAKSPPKKR HHCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC KTKSD CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA