| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
Click here to switch to the map view.
The map label for this gene is 114797623
Identifier: 114797623
GI number: 114797623
Start: 3467388
End: 3468068
Strand: Direct
Name: 114797623
Synonym: HNE_3313
Alternate gene names: NA
Gene position: 3467388-3468068 (Clockwise)
Preceding gene: 114799014
Following gene: 114800112
Centisome position: 93.59
GC content: 56.98
Gene sequence:
>681_bases ATGCTGCCTCCCGATCAAGCCTGTCTCCTGTTGTGCGACATCAAGGATTCTTCCAGCCTCGGGCCGGAAAGAGCCGCCGC AATTCTTGCGCAGATCGACGCGCAACTTGCCGAGCTGAATAGCCGCCATTCCGATCAGATCATTCTGCCGTTCGAGATCA GTTACGGCGATGAATTTGCCGGTCTGGTGCAGGCGCCCGCTACGGCCTTCGAGATCGTGCGCAGCATCCGGCGGGAAATC GCCGGACAGGTCAGCTTTCGTTTTGCGGCCGTTCATGGGCGCATAGGCGCGCGCAGTGGCAATATCCGCCAGGTCGGCGG AGAAGTATTTACCCTCGCCAACGCAGCCATAGCCCGCCTGAAGAGGCAAAACCGCTTTGGCGAGTGGCATATCTACCATG ATGCGCGCGACAGCGAACTGAGCCTGCTGACCAATCTGTGCCAGGGTTTTATCGGTAGAATGTCGGCCTATCAGTTCCAG GTGTATTCGCTTCTGGCCGACGGCCTCTCCCAGAAAGTCGTCGCCGAACAGCTCGGCAAATACCCCCAATCTGTCTCAGA CGCTGTTCGCCGGGCGGAGATAGATCTTGTGATCGAAGCGGAGCGACAGATACTGGAACAGCTTAAAACCTACACCCAAC CGAATACCATTGCTTCGGAGAAATCAATTGAATCCCGTTGA
Upstream 100 bases:
>100_bases TCGACACCGAGGGCGAAGAAGACGAACGCCAGGTCGCCGCTGAATAGGTAATCAACGGAAATTCATTGATTATTGAATAT CAATGGATTATCATTGATAT
Downstream 100 bases:
>100_bases TATTTCAATTCTCGTGGGTATGGCACTTGCTTCGCATATTCTCTCAACGCTCATTATCCGCCTCGGCATTCCGAAGCTCA AATCGGGCGATGCGCCTGCG
Product: putative satD protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MLPPDQACLLLCDIKDSSSLGPERAAAILAQIDAQLAELNSRHSDQIILPFEISYGDEFAGLVQAPATAFEIVRSIRREI AGQVSFRFAAVHGRIGARSGNIRQVGGEVFTLANAAIARLKRQNRFGEWHIYHDARDSELSLLTNLCQGFIGRMSAYQFQ VYSLLADGLSQKVVAEQLGKYPQSVSDAVRRAEIDLVIEAERQILEQLKTYTQPNTIASEKSIESR
Sequences:
>Translated_226_residues MLPPDQACLLLCDIKDSSSLGPERAAAILAQIDAQLAELNSRHSDQIILPFEISYGDEFAGLVQAPATAFEIVRSIRREI AGQVSFRFAAVHGRIGARSGNIRQVGGEVFTLANAAIARLKRQNRFGEWHIYHDARDSELSLLTNLCQGFIGRMSAYQFQ VYSLLADGLSQKVVAEQLGKYPQSVSDAVRRAEIDLVIEAERQILEQLKTYTQPNTIASEKSIESR >Mature_226_residues MLPPDQACLLLCDIKDSSSLGPERAAAILAQIDAQLAELNSRHSDQIILPFEISYGDEFAGLVQAPATAFEIVRSIRREI AGQVSFRFAAVHGRIGARSGNIRQVGGEVFTLANAAIARLKRQNRFGEWHIYHDARDSELSLLTNLCQGFIGRMSAYQFQ VYSLLADGLSQKVVAEQLGKYPQSVSDAVRRAEIDLVIEAERQILEQLKTYTQPNTIASEKSIESR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25005; Mature: 25005
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPPDQACLLLCDIKDSSSLGPERAAAILAQIDAQLAELNSRHSDQIILPFEISYGDEFA CCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHH GLVQAPATAFEIVRSIRREIAGQVSFRFAAVHGRIGARSGNIRQVGGEVFTLANAAIARL HHHHCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHCHHHHHHHHHHHHHH KRQNRFGEWHIYHDARDSELSLLTNLCQGFIGRMSAYQFQVYSLLADGLSQKVVAEQLGK HHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC YPQSVSDAVRRAEIDLVIEAERQILEQLKTYTQPNTIASEKSIESR CCHHHHHHHHHHHHHEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MLPPDQACLLLCDIKDSSSLGPERAAAILAQIDAQLAELNSRHSDQIILPFEISYGDEFA CCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHH GLVQAPATAFEIVRSIRREIAGQVSFRFAAVHGRIGARSGNIRQVGGEVFTLANAAIARL HHHHCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHCHHHHHHHHHHHHHH KRQNRFGEWHIYHDARDSELSLLTNLCQGFIGRMSAYQFQVYSLLADGLSQKVVAEQLGK HHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC YPQSVSDAVRRAEIDLVIEAERQILEQLKTYTQPNTIASEKSIESR CCHHHHHHHHHHHHHEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA