| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is aao [H]
Identifier: 114797607
GI number: 114797607
Start: 2007981
End: 2009114
Strand: Reverse
Name: aao [H]
Synonym: HNE_1940
Alternate gene names: 114797607
Gene position: 2009114-2007981 (Counterclockwise)
Preceding gene: 114797966
Following gene: 114798576
Centisome position: 54.23
GC content: 64.11
Gene sequence:
>1134_bases ATGCCTGAGCTTGCCCGCCGATCTGTTCTTCTTGGCCTCGGGGCCAGCGCGCTCACCGCCTGTGTCAGCCAGCCTGCTGC CATGGCGCCGCCACCGGCGGCACGGACCTTTCCGAAGGTGTTGTCCCAGCGCGACCGGATAACGCGGACAGTGGTTGGCC TTCGTCCCTTCCGCCCGCAGGGGTTTCGCCTGGAAGCCGAGCGGTTCGGGGACAAAACGGTCATTCACAATTACGGCCAT GGCGGCTGCGGTGTGACCCTTTCATGGGGCACCTGTCAGCGCGCCGCCGTGATGGCCGGAGAGACGGGCCGGCAAGATGT GGCCATCCTGGGCGGGGGTGTCATGGGGCTGACCAGCGCGCTGATCCTCGCGCGGCGGGGCCATGATGTGACGGTTTATG CGGATGTGATGCACCCCAACACGACCTCGAACATCGCCGGCGCGCTCTGGCTGCCCTCCAGCCTGTTTGACCGCGATGTG GCGAGCGAGGAATTCCTGCGCCTCAACTGGCAGGTGACACGCGAGGCGCATCGGGGGTTTCTGCCCTATGTGAACCGGCC GGGATATGGGGTGAGCTGGGTGCGCCACTCGGAAGTATCTCCGCGCGTACGCGAGCCGCGCTGGGCACTGCCGGGGGGTG ATGATCTCTATCCGGATCTGGATGTGCGCACGACCGAGACACGCTTCGGCTTTGCGTATGAGGAGCGATACAACACGCTG ATGATTGATCCGGATTATTATCTCGACATGCTGATGAAGGATGGCCAGCTGGCGGGCGCCAGATTTGTGGCGCGCCGGTT TGAGAGCCTTGAGGAGGTTCTCGCCCTGCCACAGCCTGTGATCGTCAATTGCACCGGCCTGGGCGCGGCAAAACTGTTCG GGGATGAAACCCTGATGCCCATCCGGGGGCAGCTGAGCCATCTGCTGCCGCAGCCGGAGGTCGATTATTCCTACACTGCT TCAGGGCAGGGCGGCGTGCTTTACATGTTTCCCCGCAAAACAGGATTGGTCCTCGGAGGGAGCCATGGGCGGGGTGACGC GTCGATGGACATAAGCGAGGCGGAACTCACCCGGATGGTGGACGGGCACGCGGCGCTGGCGGAACGGGCGAGCTTCGTGA CATTTGCAGGCTGA
Upstream 100 bases:
>100_bases TTCGGGCAGATGCGCAAATTACCCTTGCCAGTCCTGACACCAAGGTTGGCGGGCGGCATCGGGGGCGGCTAGACAGGAGC TTCATTTGGAGTGCTGACCG
Downstream 100 bases:
>100_bases TCGTCAGCGCGGCTGGGGAAACATGGCGTTTTCGGGGTGATTTTGCGGCGGGCGAAACCTGAGGTCCCTTGATGCGTTCG GCAATGGGAAGCCACGCATC
Product: FAD-binding oxidoreductase
Products: NA
Alternate protein names: DAAO; DAMOX; DAO [H]
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MPELARRSVLLGLGASALTACVSQPAAMAPPPAARTFPKVLSQRDRITRTVVGLRPFRPQGFRLEAERFGDKTVIHNYGH GGCGVTLSWGTCQRAAVMAGETGRQDVAILGGGVMGLTSALILARRGHDVTVYADVMHPNTTSNIAGALWLPSSLFDRDV ASEEFLRLNWQVTREAHRGFLPYVNRPGYGVSWVRHSEVSPRVREPRWALPGGDDLYPDLDVRTTETRFGFAYEERYNTL MIDPDYYLDMLMKDGQLAGARFVARRFESLEEVLALPQPVIVNCTGLGAAKLFGDETLMPIRGQLSHLLPQPEVDYSYTA SGQGGVLYMFPRKTGLVLGGSHGRGDASMDISEAELTRMVDGHAALAERASFVTFAG
Sequences:
>Translated_377_residues MPELARRSVLLGLGASALTACVSQPAAMAPPPAARTFPKVLSQRDRITRTVVGLRPFRPQGFRLEAERFGDKTVIHNYGH GGCGVTLSWGTCQRAAVMAGETGRQDVAILGGGVMGLTSALILARRGHDVTVYADVMHPNTTSNIAGALWLPSSLFDRDV ASEEFLRLNWQVTREAHRGFLPYVNRPGYGVSWVRHSEVSPRVREPRWALPGGDDLYPDLDVRTTETRFGFAYEERYNTL MIDPDYYLDMLMKDGQLAGARFVARRFESLEEVLALPQPVIVNCTGLGAAKLFGDETLMPIRGQLSHLLPQPEVDYSYTA SGQGGVLYMFPRKTGLVLGGSHGRGDASMDISEAELTRMVDGHAALAERASFVTFAG >Mature_376_residues PELARRSVLLGLGASALTACVSQPAAMAPPPAARTFPKVLSQRDRITRTVVGLRPFRPQGFRLEAERFGDKTVIHNYGHG GCGVTLSWGTCQRAAVMAGETGRQDVAILGGGVMGLTSALILARRGHDVTVYADVMHPNTTSNIAGALWLPSSLFDRDVA SEEFLRLNWQVTREAHRGFLPYVNRPGYGVSWVRHSEVSPRVREPRWALPGGDDLYPDLDVRTTETRFGFAYEERYNTLM IDPDYYLDMLMKDGQLAGARFVARRFESLEEVLALPQPVIVNCTGLGAAKLFGDETLMPIRGQLSHLLPQPEVDYSYTAS GQGGVLYMFPRKTGLVLGGSHGRGDASMDISEAELTRMVDGHAALAERASFVTFAG
Specific function: Unknown
COG id: COG0665
COG function: function code E; Glycine/D-amino acid oxidases (deaminating)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DAMOX/DASOX family [H]
Homologues:
Organism=Homo sapiens, GI40217815, Length=266, Percent_Identity=26.6917293233083, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI148539837, Length=264, Percent_Identity=27.6515151515151, Blast_Score=79, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023209 - InterPro: IPR006076 - InterPro: IPR016040 [H]
Pfam domain/function: PF01266 DAO [H]
EC number: =1.4.3.3 [H]
Molecular weight: Translated: 41199; Mature: 41067
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPELARRSVLLGLGASALTACVSQPAAMAPPPAARTFPKVLSQRDRITRTVVGLRPFRPQ CCCHHHHHEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC GFRLEAERFGDKTVIHNYGHGGCGVTLSWGTCQRAAVMAGETGRQDVAILGGGVMGLTSA CCEEEHHHCCCEEEEECCCCCCCEEEEECCCCCHHEEECCCCCCCCEEEECCCHHHHHHH LILARRGHDVTVYADVMHPNTTSNIAGALWLPSSLFDRDVASEEFLRLNWQVTREAHRGF HHHHCCCCCEEEEEEEECCCCCCCCCEEEECCHHHHHHCCCCCHHEEEEHEEEHHHHCCC LPYVNRPGYGVSWVRHSEVSPRVREPRWALPGGDDLYPDLDVRTTETRFGFAYEERYNTL CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEHHCCCEE MIDPDYYLDMLMKDGQLAGARFVARRFESLEEVLALPQPVIVNCTGLGAAKLFGDETLMP EECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCCCCCCC IRGQLSHLLPQPEVDYSYTASGQGGVLYMFPRKTGLVLGGSHGRGDASMDISEAELTRMV HHHHHHHHCCCCCCCCEEECCCCCCEEEEECCCCCEEEECCCCCCCCCCCCHHHHHHHHH DGHAALAERASFVTFAG CCHHHHHHHCCEEEECC >Mature Secondary Structure PELARRSVLLGLGASALTACVSQPAAMAPPPAARTFPKVLSQRDRITRTVVGLRPFRPQ CCHHHHHEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC GFRLEAERFGDKTVIHNYGHGGCGVTLSWGTCQRAAVMAGETGRQDVAILGGGVMGLTSA CCEEEHHHCCCEEEEECCCCCCCEEEEECCCCCHHEEECCCCCCCCEEEECCCHHHHHHH LILARRGHDVTVYADVMHPNTTSNIAGALWLPSSLFDRDVASEEFLRLNWQVTREAHRGF HHHHCCCCCEEEEEEEECCCCCCCCCEEEECCHHHHHHCCCCCHHEEEEHEEEHHHHCCC LPYVNRPGYGVSWVRHSEVSPRVREPRWALPGGDDLYPDLDVRTTETRFGFAYEERYNTL CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEHHCCCEE MIDPDYYLDMLMKDGQLAGARFVARRFESLEEVLALPQPVIVNCTGLGAAKLFGDETLMP EECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCCCCCCC IRGQLSHLLPQPEVDYSYTASGQGGVLYMFPRKTGLVLGGSHGRGDASMDISEAELTRMV HHHHHHHHCCCCCCCCEEECCCCCCEEEEECCCCCEEEECCCCCCCCCCCCHHHHHHHHH DGHAALAERASFVTFAG CCHHHHHHHCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]