| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797582
Identifier: 114797582
GI number: 114797582
Start: 3500409
End: 3501017
Strand: Direct
Name: 114797582
Synonym: HNE_3351
Alternate gene names: NA
Gene position: 3500409-3501017 (Clockwise)
Preceding gene: 114798781
Following gene: 114799283
Centisome position: 94.48
GC content: 62.56
Gene sequence:
>609_bases ATGACGGCCCGCATCGCCCTGTTTGATTTAGGTGGCGTCCTCCTCGACTGGTCGCCGGCACGCCTTTACGCCCAGATCTT CAGCAACGCGGCTGAAGCAGACCGGTTCCTTGCCGAAGTGTGCACCATGGCGTGGCACACCGAGCATGACCGCGGCGTCA GCTTTGCGGATAATGCCGCGCCGCTGATCGCGAAATATCCCCAGTATGAACCACAGATCCGCGCCTGGCACAGCCGCTGG GGCGAGATGTTTGACGGCTACATCACCGGAACCGACCGCCTGGTGGAGATGCTGCACGGCCGCGAAGTGCCCCTCTACGG CCTCTCCAACATGCCCGCCGAGATATGGCCGCAGATGCTGGACATGTTCCCGGCCCTGCGCCGTTTCCGCGAAGTCGTGG TGTCCGGCCAGATCGGCATGATCAAACCAGACCCGGCCATTTTCCACTATACCCGCACCCGTATGGGCGATCCCGATCCG CGCGACGTCCTGTTCATCGACGATCTGCCGAAGAATATCGCGATGGCCGAGGCGCTGGGCTACCAGACGCATCTGTTCAC CGATGCGGCCCGTCTAGAGGGCGAACTGATCCGGCAAGGGCTTCTCTGA
Upstream 100 bases:
>100_bases GTGCGCCGCAAAGGCCGGGTCTATGTGATCAACAAAACCGACCCGCGTTTCAAAGCGAAACAAGGCTGACCCTTAGATGA ACAGGGATTGAGGCGGCAGA
Downstream 100 bases:
>100_bases GCGCGGTCTCTGGCAGTTCCCCTGAAGGCGGCCGTTGCCGAGAGCGCCGCGCGCGTCATATTAGAAGGCATGATCAAGCG GCTTCTTCCTGCCCTTCTCC
Product: HAD family hydrolase
Products: NA
Alternate protein names: Hydrolase; HAD-Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; HAD Superfamily Hydrolase; HAD Hydrolase Family IA; 2-Haloacid Dehalogenase; Hydrolase Haloacid Dehalogenase-Like Family Protein; Haloacid Dehalogenase Superfamily Protein; Hydrolase Protein; Had-Superfamily Hydrolase Subfamily Ia; Haloacid Dehalogenase-Like Family Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Hydrolase Protein Haloacid Dehalogenase-Like Family; Haloacid Dehalogenase-Like Hydrolase Protein; Alpha Beta Hydrolase; HAD Family Phosphatase; HAD Hydrolase Superfamily Protein
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MTARIALFDLGGVLLDWSPARLYAQIFSNAAEADRFLAEVCTMAWHTEHDRGVSFADNAAPLIAKYPQYEPQIRAWHSRW GEMFDGYITGTDRLVEMLHGREVPLYGLSNMPAEIWPQMLDMFPALRRFREVVVSGQIGMIKPDPAIFHYTRTRMGDPDP RDVLFIDDLPKNIAMAEALGYQTHLFTDAARLEGELIRQGLL
Sequences:
>Translated_202_residues MTARIALFDLGGVLLDWSPARLYAQIFSNAAEADRFLAEVCTMAWHTEHDRGVSFADNAAPLIAKYPQYEPQIRAWHSRW GEMFDGYITGTDRLVEMLHGREVPLYGLSNMPAEIWPQMLDMFPALRRFREVVVSGQIGMIKPDPAIFHYTRTRMGDPDP RDVLFIDDLPKNIAMAEALGYQTHLFTDAARLEGELIRQGLL >Mature_201_residues TARIALFDLGGVLLDWSPARLYAQIFSNAAEADRFLAEVCTMAWHTEHDRGVSFADNAAPLIAKYPQYEPQIRAWHSRWG EMFDGYITGTDRLVEMLHGREVPLYGLSNMPAEIWPQMLDMFPALRRFREVVVSGQIGMIKPDPAIFHYTRTRMGDPDPR DVLFIDDLPKNIAMAEALGYQTHLFTDAARLEGELIRQGLL
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22998; Mature: 22866
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARIALFDLGGVLLDWSPARLYAQIFSNAAEADRFLAEVCTMAWHTEHDRGVSFADNAA CCCEEEEEECCCEEECCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PLIAKYPQYEPQIRAWHSRWGEMFDGYITGTDRLVEMLHGREVPLYGLSNMPAEIWPQML CHHHCCCCCCHHHHHHHHHHHHHHCCEECCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH DMFPALRRFREVVVSGQIGMIKPDPAIFHYTRTRMGDPDPRDVLFIDDLPKNIAMAEALG HHHHHHHHHHHHHHCCCCCEECCCCHHEEEHHHCCCCCCCCCEEEECCCCCHHHHHHHHC YQTHLFTDAARLEGELIRQGLL CHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TARIALFDLGGVLLDWSPARLYAQIFSNAAEADRFLAEVCTMAWHTEHDRGVSFADNAA CCEEEEEECCCEEECCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PLIAKYPQYEPQIRAWHSRWGEMFDGYITGTDRLVEMLHGREVPLYGLSNMPAEIWPQML CHHHCCCCCCHHHHHHHHHHHHHHCCEECCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH DMFPALRRFREVVVSGQIGMIKPDPAIFHYTRTRMGDPDPRDVLFIDDLPKNIAMAEALG HHHHHHHHHHHHHHCCCCCEECCCCHHEEEHHHCCCCCCCCCEEEECCCCCHHHHHHHHC YQTHLFTDAARLEGELIRQGLL CHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA