| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is lon [H]
Identifier: 114797553
GI number: 114797553
Start: 991154
End: 993574
Strand: Direct
Name: lon [H]
Synonym: HNE_0977
Alternate gene names: 114797553
Gene position: 991154-993574 (Clockwise)
Preceding gene: 114799120
Following gene: 114800345
Centisome position: 26.75
GC content: 62.33
Gene sequence:
>2421_bases ATGCCAAAGACAAAAACAGTGCCGGTGTTGCCGCTTCGGGACATCGTTGTTTTTCCTGACATGGTCGCCCCCCTCTTTGT GGGCCGCGACAAGTCCGTCCGGGCGCTCGAGATGATCGACGAGTCCGACAATGAGATCATGCTGGTGGCCCAGAAGGATG CGGCCGTCGACAACCCTGTGACCAGTGACCTGCATGCGACGGGCACGCTGGCGACCATCCTGCAACTCTTGAAGCTGCCC GATGGCACCGTGAAGGTGCTGGTCGAGGGCCGCTCGCGCGCGCGCCTGGTGGCGCTGCATGACCGGGCCGAGTATTTCGA GGCTGAGGTTGAGGCCATTCCGGAAGCCGATGCGTCGGGCGCTGATGTGCAGGCGCTGATGCGCGCCGTGCAGGAGCAGT TCGAGAACTATGTGAAGCTTAACCGCAAGATCCCGCCTGAGGCGGTGACCACGATCAGCCAGCTGACTGATCCGGGCCGG CTTGCCGATCAGGTGGCGTCAAACCTCTCTGTGAAGCTTTCCGACAAGCAGGAATTGCTGGAGATGCCGGAGGTTAAAGA CCGGCTGGAGAAGGTCTTCTCGCTGATGGAAGGCGAGATGGGCATGCTGCAGATGGAGCGGAAGATCAAAAACCGCGTCA AGCGGCAGATGGAGAAGACCCAGCGCGAATATTATCTCAACGAGCAGATGAAGGCGATCCAGCGCGAGCTGGGCGATTCT GGCGGCGAGGGCGGCGAGCGCGATGAGCTGGCCGAGCTTGACCAGAAGATTGCCGACACGCCGCTGAGCCAGGAAGCGCG CACCAAGGCCGAAGCCGAGATGAAGAAGCTGCGTCAGATGTCGCCGATGTCGGCGGAATCGACGGTTGTGCGGAACTATC TCGACTGGATTCTGTCGCTGCCCTGGGGCAAGCGGAAGGACATCGAAACTGACCTTCTCAAAGCCGAGAAGCAGCTCGAT GACGACCATTACGGCCTCGACAAGGTGAAAGAGCGTATTCTCGAATACCTCGCCGTGCAGAAGCGGACCGGGCGCCTCAA AGGCCCGATCCTCTGTCTCGTCGGGCCTCCGGGCGTGGGTAAGACCTCGCTGGGCCGCTCGATTGCCGAAGCCACGGGAC GCGACTTTGTGCGTGTGTCGCTGGGCGGCGTGCGCGATGAGAGCGAGATCCGCGGTCACCGCCGGACCTATATCGGCTCG ATGCCGGGCCGGGTGATCCAGAGCCTGAAGAAGACCAAGAGCGGCAACCCGCTGTTCCTGCTCGACGAGATCGACAAGAT GGGCATGGACCATCGCGGCGATCCGGCTTCGGCGCTGCTCGAAGTGCTCGACCCTGAGCAGAACTCGACGTTCAACGACC ATTATCTGGAGGTCGACTATGACCTCTCCGACGTGATGTTCGTGACGACGGCGAACTCGCTCAACATGCCTCAGCCGCTG CTGGACCGGATGGAGATCATCCGTATCGCGGGCTACACCGAAGAAGAGAAGCTGGAGATCACCAAGCGCCACCTCATTCC GCAGGTGCGCGAGGATCATGGTCTCAGGGATGACGAATGGATCGTGACCGACGAGGCCATCCGCGACCTGATCCGCTACT ATTCGCGTGAAGCGGGCGTGCGGAGCCTGAAGCGTGAAGTTTCGCGCCTTGCCCGCAAGGCTGTGCGTGAGATTGCAACG GGCGAGCATACGAGCCTGACCATCGATTCGGACAATCTCGCCAAATATGCGGGCGTCCGGAAGCATCGCTACGGCCTTGC CGACGAAACCGATCAGGTGGGCGCTGTCACCGGCCTTGCCTGGACGGAAGTGGGCGGCGACCTGCTGACCATCGAGGCGG TGAAAATGCCCGGCCGGGGCGCGATGAAGGTGACGGGTAACCTGCGCGATGTGATGAAGGAGTCGATTTCGGCGGCCAGC TCGCTCGTGCGGGCCCGCTCTGTGGACCTCGGCATCAAGCCGACCGTGTTCAACACGACCGACATCCACGTGCACGTGCC AGATGGCGCAACGCCCAAGGATGGCCCGTCTGCGGGCGCGGCCATGACCACGGCCATCGTTTCGCTGCTGACCGGCATTC CGGTGAACCGCGAAGTGGCGATGACAGGCGAGATATCCTTGCGTGGACGGGTGCTGCCGATTGGCGGCCTCAAGGAGAAA CTGCTCGCGGCCCTGCGCGGCGGCATCAAGACGGTGCTGATCCCGAAGGAAAACGAGAAGGACCTCGATGAGATCCCCGA TAACGTCAAAACCGGCATGAAGATCATTCCGGTGTCGGACATCCAGGAAGTGCTGAAACTGGCGCTGACCGGGCCTCTGA CGGCGATCGAATGGTCTGAAGCCGATGAGGCGCGCCTGCAGGCGAGCCTGGGCGGCGGACCGGCCCCGGCAACGGACGGC GATGCGGTGCGCACGCACTGA
Upstream 100 bases:
>100_bases TTTCCACATTCCCACTGTCGCCCAATTAATGTCCTAGTGTGGCATGACAGGGTATAAGGGTTGCTGCTCAGCGGGACCCG AATCAAAGGAGGCACTTCAG
Downstream 100 bases:
>100_bases TCTGCCAGCGACGCTGAAACTTTTGGAAAAGCCCCCTCGATGAGGGGGCTTTTTTGTTTGGGGGGTGACAGCAGCAAACC ACACTTGCCTTCCTGCCACT
Product: ATP-dependent protease La
Products: NA
Alternate protein names: ATP-dependent protease La [H]
Number of amino acids: Translated: 806; Mature: 805
Protein sequence:
>806_residues MPKTKTVPVLPLRDIVVFPDMVAPLFVGRDKSVRALEMIDESDNEIMLVAQKDAAVDNPVTSDLHATGTLATILQLLKLP DGTVKVLVEGRSRARLVALHDRAEYFEAEVEAIPEADASGADVQALMRAVQEQFENYVKLNRKIPPEAVTTISQLTDPGR LADQVASNLSVKLSDKQELLEMPEVKDRLEKVFSLMEGEMGMLQMERKIKNRVKRQMEKTQREYYLNEQMKAIQRELGDS GGEGGERDELAELDQKIADTPLSQEARTKAEAEMKKLRQMSPMSAESTVVRNYLDWILSLPWGKRKDIETDLLKAEKQLD DDHYGLDKVKERILEYLAVQKRTGRLKGPILCLVGPPGVGKTSLGRSIAEATGRDFVRVSLGGVRDESEIRGHRRTYIGS MPGRVIQSLKKTKSGNPLFLLDEIDKMGMDHRGDPASALLEVLDPEQNSTFNDHYLEVDYDLSDVMFVTTANSLNMPQPL LDRMEIIRIAGYTEEEKLEITKRHLIPQVREDHGLRDDEWIVTDEAIRDLIRYYSREAGVRSLKREVSRLARKAVREIAT GEHTSLTIDSDNLAKYAGVRKHRYGLADETDQVGAVTGLAWTEVGGDLLTIEAVKMPGRGAMKVTGNLRDVMKESISAAS SLVRARSVDLGIKPTVFNTTDIHVHVPDGATPKDGPSAGAAMTTAIVSLLTGIPVNREVAMTGEISLRGRVLPIGGLKEK LLAALRGGIKTVLIPKENEKDLDEIPDNVKTGMKIIPVSDIQEVLKLALTGPLTAIEWSEADEARLQASLGGGPAPATDG DAVRTH
Sequences:
>Translated_806_residues MPKTKTVPVLPLRDIVVFPDMVAPLFVGRDKSVRALEMIDESDNEIMLVAQKDAAVDNPVTSDLHATGTLATILQLLKLP DGTVKVLVEGRSRARLVALHDRAEYFEAEVEAIPEADASGADVQALMRAVQEQFENYVKLNRKIPPEAVTTISQLTDPGR LADQVASNLSVKLSDKQELLEMPEVKDRLEKVFSLMEGEMGMLQMERKIKNRVKRQMEKTQREYYLNEQMKAIQRELGDS GGEGGERDELAELDQKIADTPLSQEARTKAEAEMKKLRQMSPMSAESTVVRNYLDWILSLPWGKRKDIETDLLKAEKQLD DDHYGLDKVKERILEYLAVQKRTGRLKGPILCLVGPPGVGKTSLGRSIAEATGRDFVRVSLGGVRDESEIRGHRRTYIGS MPGRVIQSLKKTKSGNPLFLLDEIDKMGMDHRGDPASALLEVLDPEQNSTFNDHYLEVDYDLSDVMFVTTANSLNMPQPL LDRMEIIRIAGYTEEEKLEITKRHLIPQVREDHGLRDDEWIVTDEAIRDLIRYYSREAGVRSLKREVSRLARKAVREIAT GEHTSLTIDSDNLAKYAGVRKHRYGLADETDQVGAVTGLAWTEVGGDLLTIEAVKMPGRGAMKVTGNLRDVMKESISAAS SLVRARSVDLGIKPTVFNTTDIHVHVPDGATPKDGPSAGAAMTTAIVSLLTGIPVNREVAMTGEISLRGRVLPIGGLKEK LLAALRGGIKTVLIPKENEKDLDEIPDNVKTGMKIIPVSDIQEVLKLALTGPLTAIEWSEADEARLQASLGGGPAPATDG DAVRTH >Mature_805_residues PKTKTVPVLPLRDIVVFPDMVAPLFVGRDKSVRALEMIDESDNEIMLVAQKDAAVDNPVTSDLHATGTLATILQLLKLPD GTVKVLVEGRSRARLVALHDRAEYFEAEVEAIPEADASGADVQALMRAVQEQFENYVKLNRKIPPEAVTTISQLTDPGRL ADQVASNLSVKLSDKQELLEMPEVKDRLEKVFSLMEGEMGMLQMERKIKNRVKRQMEKTQREYYLNEQMKAIQRELGDSG GEGGERDELAELDQKIADTPLSQEARTKAEAEMKKLRQMSPMSAESTVVRNYLDWILSLPWGKRKDIETDLLKAEKQLDD DHYGLDKVKERILEYLAVQKRTGRLKGPILCLVGPPGVGKTSLGRSIAEATGRDFVRVSLGGVRDESEIRGHRRTYIGSM PGRVIQSLKKTKSGNPLFLLDEIDKMGMDHRGDPASALLEVLDPEQNSTFNDHYLEVDYDLSDVMFVTTANSLNMPQPLL DRMEIIRIAGYTEEEKLEITKRHLIPQVREDHGLRDDEWIVTDEAIRDLIRYYSREAGVRSLKREVSRLARKAVREIATG EHTSLTIDSDNLAKYAGVRKHRYGLADETDQVGAVTGLAWTEVGGDLLTIEAVKMPGRGAMKVTGNLRDVMKESISAASS LVRARSVDLGIKPTVFNTTDIHVHVPDGATPKDGPSAGAAMTTAIVSLLTGIPVNREVAMTGEISLRGRVLPIGGLKEKL LAALRGGIKTVLIPKENEKDLDEIPDNVKTGMKIIPVSDIQEVLKLALTGPLTAIEWSEADEARLQASLGGGPAPATDGD AVRTH
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG0466
COG function: function code O; ATP-dependent Lon protease, bacterial type
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain [H]
Homologues:
Organism=Homo sapiens, GI21396489, Length=684, Percent_Identity=39.9122807017544, Blast_Score=515, Evalue=1e-146, Organism=Homo sapiens, GI31377667, Length=785, Percent_Identity=38.7261146496815, Blast_Score=511, Evalue=1e-144, Organism=Escherichia coli, GI1786643, Length=764, Percent_Identity=61.7801047120419, Blast_Score=948, Evalue=0.0, Organism=Caenorhabditis elegans, GI17505831, Length=707, Percent_Identity=39.4625176803395, Blast_Score=492, Evalue=1e-139, Organism=Caenorhabditis elegans, GI17556486, Length=536, Percent_Identity=41.6044776119403, Blast_Score=430, Evalue=1e-120, Organism=Saccharomyces cerevisiae, GI6319449, Length=702, Percent_Identity=40.02849002849, Blast_Score=498, Evalue=1e-141, Organism=Drosophila melanogaster, GI221513036, Length=627, Percent_Identity=42.7432216905901, Blast_Score=518, Evalue=1e-147, Organism=Drosophila melanogaster, GI24666867, Length=627, Percent_Identity=42.7432216905901, Blast_Score=517, Evalue=1e-146,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR008268 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 [H]
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C [H]
EC number: =3.4.21.53 [H]
Molecular weight: Translated: 89005; Mature: 88874
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: PS01046 LON_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKTKTVPVLPLRDIVVFPDMVAPLFVGRDKSVRALEMIDESDNEIMLVAQKDAAVDNPV CCCCCCCCCCCCHHHHHCHHHHHHHHCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCC TSDLHATGTLATILQLLKLPDGTVKVLVEGRSRARLVALHDRAEYFEAEVEAIPEADASG CCCHHCCHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHCCCCCCCC ADVQALMRAVQEQFENYVKLNRKIPPEAVTTISQLTDPGRLADQVASNLSVKLSDKQELL CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHCCCEEEECCHHHHH EMPEVKDRLEKVFSLMEGEMGMLQMERKIKNRVKRQMEKTQREYYLNEQMKAIQRELGDS HCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GGEGGERDELAELDQKIADTPLSQEARTKAEAEMKKLRQMSPMSAESTVVRNYLDWILSL CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC PWGKRKDIETDLLKAEKQLDDDHYGLDKVKERILEYLAVQKRTGRLKGPILCLVGPPGVG CCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC KTSLGRSIAEATGRDFVRVSLGGVRDESEIRGHRRTYIGSMPGRVIQSLKKTKSGNPLFL HHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCHHHHHHCCCHHHHHHHHHHCCCCCCEEE LDEIDKMGMDHRGDPASALLEVLDPEQNSTFNDHYLEVDYDLSDVMFVTTANSLNMPQPL EECHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCHHH LDRMEIIRIAGYTEEEKLEITKRHLIPQVREDHGLRDDEWIVTDEAIRDLIRYYSREAGV HHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHH RSLKREVSRLARKAVREIATGEHTSLTIDSDNLAKYAGVRKHRYGLADETDQVGAVTGLA HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCH WTEVGGDLLTIEAVKMPGRGAMKVTGNLRDVMKESISAASSLVRARSVDLGIKPTVFNTT HHHCCCCEEEEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCE DIHVHVPDGATPKDGPSAGAAMTTAIVSLLTGIPVNREVAMTGEISLRGRVLPIGGLKEK EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECEEECCEEEECCCHHHH LLAALRGGIKTVLIPKENEKDLDEIPDNVKTGMKIIPVSDIQEVLKLALTGPLTAIEWSE HHHHHHCCCEEEEECCCCCCCHHHCCHHHHCCCEEEEHHHHHHHHHHHHCCCCCEEECCC ADEARLQASLGGGPAPATDGDAVRTH CHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure PKTKTVPVLPLRDIVVFPDMVAPLFVGRDKSVRALEMIDESDNEIMLVAQKDAAVDNPV CCCCCCCCCCCHHHHHCHHHHHHHHCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCC TSDLHATGTLATILQLLKLPDGTVKVLVEGRSRARLVALHDRAEYFEAEVEAIPEADASG CCCHHCCHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHCCCCCCCC ADVQALMRAVQEQFENYVKLNRKIPPEAVTTISQLTDPGRLADQVASNLSVKLSDKQELL CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHCCCEEEECCHHHHH EMPEVKDRLEKVFSLMEGEMGMLQMERKIKNRVKRQMEKTQREYYLNEQMKAIQRELGDS HCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GGEGGERDELAELDQKIADTPLSQEARTKAEAEMKKLRQMSPMSAESTVVRNYLDWILSL CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC PWGKRKDIETDLLKAEKQLDDDHYGLDKVKERILEYLAVQKRTGRLKGPILCLVGPPGVG CCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC KTSLGRSIAEATGRDFVRVSLGGVRDESEIRGHRRTYIGSMPGRVIQSLKKTKSGNPLFL HHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCHHHHHHCCCHHHHHHHHHHCCCCCCEEE LDEIDKMGMDHRGDPASALLEVLDPEQNSTFNDHYLEVDYDLSDVMFVTTANSLNMPQPL EECHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCHHH LDRMEIIRIAGYTEEEKLEITKRHLIPQVREDHGLRDDEWIVTDEAIRDLIRYYSREAGV HHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHH RSLKREVSRLARKAVREIATGEHTSLTIDSDNLAKYAGVRKHRYGLADETDQVGAVTGLA HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCH WTEVGGDLLTIEAVKMPGRGAMKVTGNLRDVMKESISAASSLVRARSVDLGIKPTVFNTT HHHCCCCEEEEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCE DIHVHVPDGATPKDGPSAGAAMTTAIVSLLTGIPVNREVAMTGEISLRGRVLPIGGLKEK EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECEEECCEEEECCCHHHH LLAALRGGIKTVLIPKENEKDLDEIPDNVKTGMKIIPVSDIQEVLKLALTGPLTAIEWSE HHHHHHCCCEEEEECCCCCCCHHHCCHHHHCCCEEEEHHHHHHHHHHHHCCCCCEEECCC ADEARLQASLGGGPAPATDGDAVRTH CHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8666236 [H]